CircRNA Information

General Information
circRNA Basic Information
CircID chr14:105926650|105926790
Strand +
CircType exon
Host Gene ENSG00000226777.6;
Algorism CIRI2;
Sequence CTGCCTCTCTCTTTCCTCATTGGTCCCCACAGGTCCGTGGTGGTTGCCGTATCGGGAGGCCCCATGGTGGCAGGGGTGGGACACCTGGTATACGTCGCCAGGTGTGTCCAATAGGCTCATGCTCACACCTTCTCCTGGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:105926650|105926790 hsa-miR-492 0 1 1
chr14:105926650|105926790 hsa-miR-665 0 0 1
chr14:105926650|105926790 hsa-miR-1228-5p 0 0 1
chr14:105926650|105926790 hsa-miR-1228-3p 0 0 1
chr14:105926650|105926790 hsa-miR-1827 0 0 1
chr14:105926650|105926790 hsa-miR-491-5p 1 0 1
chr14:105926650|105926790 hsa-miR-1224-3p 0 0 1
chr14:105926650|105926790 hsa-miR-362-3p 0 0 1
chr14:105926650|105926790 hsa-miR-1260 0 0 1
chr14:105926650|105926790 hsa-miR-1280 0 0 1
chr14:105926650|105926790 hsa-miR-1273 0 0 1
chr14:105926650|105926790 hsa-miR-329 0 0 1
chr14:105926650|105926790 hsa-miR-1260a 0 1 0
chr14:105926650|105926790 hsa-miR-1260b 0 1 0
chr14:105926650|105926790 hsa-miR-3657 0 1 0
chr14:105926650|105926790 hsa-miR-548al 0 1 0
chr14:105926650|105926790 hsa-miR-8089 1 0 0
chr14:105926650|105926790 hsa-miR-6734-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6894-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6857-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6804-5p 0 1 0
chr14:105926650|105926790 hsa-miR-3151-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6796-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6810-5p 1 0 0
chr14:105926650|105926790 hsa-miR-5006-5p 0 1 0
chr14:105926650|105926790 hsa-miR-6786-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6749-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6776-3p 0 1 0
chr14:105926650|105926790 hsa-miR-6752-3p 0 1 0
chr14:105926650|105926790 hsa-miR-4433a-5p 0 1 0
chr14:105926650|105926790 hsa-miR-4433b-5p 0 1 0
chr14:105926650|105926790 hsa-miR-3675-5p 0 1 0
chr14:105926650|105926790 hsa-miR-3144-5p 0 1 0
chr14:105926650|105926790 hsa-miR-642b-3p 0 1 0
chr14:105926650|105926790 hsa-miR-328-5p 1 0 0
chr14:105926650|105926790 hsa-miR-4725-3p 0 1 0
chr14:105926650|105926790 hsa-miR-6795-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6887-5p 1 0 0
chr14:105926650|105926790 hsa-miR-6876-5p 0 1 0
chr14:105926650|105926790 hsa-miR-4722-3p 0 1 0
chr14:105926650|105926790 hsa-miR-6727-3p 0 1 0
chr14:105926650|105926790 hsa-miR-6801-3p 0 1 0
chr14:105926650|105926790 hsa-miR-6810-3p 0 1 0
chr14:105926650|105926790 hsa-miR-642a-3p 0 1 0
chr14:105926650|105926790 hsa-miR-6834-3p 0 1 0
chr14:105926650|105926790 hsa-miR-329-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:105926650|105926790
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence LPLSFLIGPHRSVVVAVSGGPMVAGVGHLVYVARCVQ
Nucleotide Sequence CTGCCTCTCTCTTTCCTCATTGGTCCCCACAGGTCCGTGGTGGTTGCCGTATCGGGAGGCCCCATGGTGGCAGGGGTGGGACACCTGGTATACGTCGCCAGGTGTGTCCAATAG

CircID chr14:105926650|105926790
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MVPTGPWWLPYREAPWWQGWDTWYTSPGVSNRLMLTPSPG
Nucleotide Sequence TTGGTCCCCACAGGTCCGTGGTGGTTGCCGTATCGGGAGGCCCCATGGTGGCAGGGGTGGGACACCTGGTATACGTCGCCAGGTGTGTCCAATAGGCTCATGCTCACACCTTCTCCTGGC

CircID chr14:105926650|105926790
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MSLLDTPGDVYQVSHPCHHGASRYGNHHGPVGTNEERERQ
Nucleotide Sequence ATGAGCCTATTGGACACACCTGGCGACGTATACCAGGTGTCCCACCCCTGCCACCATGGGGCCTCCCGATACGGCAACCACCACGGACCTGTGGGGACCAATGAGGAAAGAGAGAGGCAG

CircID chr14:105926650|105926790
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MATYTRCPTPATMGPPDTATTTDLWGPMRKERG
Nucleotide Sequence CTGGCGACGTATACCAGGTGTCCCACCCCTGCCACCATGGGGCCTCCCGATACGGCAACCACCACGGACCTGTGGGGACCAATGAGGAAAGAGAGAGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites