CircRNA Information

General Information
circRNA Basic Information
CircID chr14:106578906|106579181
Strand +
CircType exon
Host Gene ENSG00000211966.2;
Algorism CIRI2;
Sequence CATCATGGGGTCAACCGCCATCCTCGCCCTCCTCCTGGCTGTTCTCCAAGGTCAGTCCTGCCGAGGGCTTGAGGTCACAGAGGAGAACGGGTGGAAAGGAGCCCCTGATTCAAATTTTGTGTCTCCCCCACAGGAGTCTGTGCCGAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:106578906|106579181 hsa-miR-320a-5p 0 0 1
chr14:106578906|106579181 hsa-miR-320a-3p 0 0 1
chr14:106578906|106579181 hsa-miR-432-5p 0 0 1
chr14:106578906|106579181 hsa-miR-432-3p 0 0 1
chr14:106578906|106579181 hsa-miR-563 0 0 1
chr14:106578906|106579181 hsa-miR-600 0 0 1
chr14:106578906|106579181 hsa-miR-620 0 0 1
chr14:106578906|106579181 hsa-miR-625-5p 0 0 1
chr14:106578906|106579181 hsa-miR-625-3p 0 0 1
chr14:106578906|106579181 hsa-miR-765 0 1 1
chr14:106578906|106579181 hsa-miR-665 0 0 1
chr14:106578906|106579181 hsa-miR-1226-5p 0 0 1
chr14:106578906|106579181 hsa-miR-1226-3p 0 0 1
chr14:106578906|106579181 hsa-miR-1286 0 0 1
chr14:106578906|106579181 hsa-miR-1270 0 0 1
chr14:106578906|106579181 hsa-miR-1275 0 1 1
chr14:106578906|106579181 hsa-miR-770-5p 0 0 1
chr14:106578906|106579181 hsa-miR-491-5p 0 0 1
chr14:106578906|106579181 hsa-miR-767-5p 0 0 1
chr14:106578906|106579181 hsa-miR-767-3p 0 0 1
chr14:106578906|106579181 hsa-miR-320b 0 0 1
chr14:106578906|106579181 hsa-miR-320c 0 0 1
chr14:106578906|106579181 hsa-miR-320d 0 0 1
chr14:106578906|106579181 hsa-miR-663a 1 0 0
chr14:106578906|106579181 hsa-miR-1268a 1 0 0
chr14:106578906|106579181 hsa-miR-3131 1 0 0
chr14:106578906|106579181 hsa-miR-3169 0 1 0
chr14:106578906|106579181 hsa-miR-1268b 1 0 0
chr14:106578906|106579181 hsa-miR-4494 0 1 0
chr14:106578906|106579181 hsa-miR-2392 0 1 0
chr14:106578906|106579181 hsa-miR-4513 0 1 0
chr14:106578906|106579181 hsa-miR-4656 1 0 0
chr14:106578906|106579181 hsa-miR-4683 0 1 0
chr14:106578906|106579181 hsa-miR-4739 1 0 0
chr14:106578906|106579181 hsa-miR-4741 1 0 0
chr14:106578906|106579181 hsa-miR-5698 0 1 0
chr14:106578906|106579181 hsa-miR-6860 1 0 0
chr14:106578906|106579181 hsa-miR-8063 1 0 0
chr14:106578906|106579181 hsa-miR-9718 1 0 0
chr14:106578906|106579181 hsa-miR-133a-5p 0 1 0
chr14:106578906|106579181 hsa-miR-212-5p 1 0 0
chr14:106578906|106579181 hsa-miR-4768-3p 0 1 0
chr14:106578906|106579181 hsa-miR-7847-3p 1 0 0
chr14:106578906|106579181 hsa-miR-593-5p 1 0 0
chr14:106578906|106579181 hsa-miR-6742-5p 1 0 0
chr14:106578906|106579181 hsa-miR-3151-5p 1 0 0
chr14:106578906|106579181 hsa-miR-6798-5p 1 1 0
chr14:106578906|106579181 hsa-miR-3130-3p 0 1 0
chr14:106578906|106579181 hsa-miR-6728-3p 0 1 0
chr14:106578906|106579181 hsa-miR-3150b-3p 0 1 0
chr14:106578906|106579181 hsa-miR-6888-5p 0 1 0
chr14:106578906|106579181 hsa-miR-6786-5p 1 0 0
chr14:106578906|106579181 hsa-miR-939-3p 1 0 0
chr14:106578906|106579181 hsa-miR-6763-3p 1 1 0
chr14:106578906|106579181 hsa-miR-3944-3p 1 0 0
chr14:106578906|106579181 hsa-miR-1229-5p 1 0 0
chr14:106578906|106579181 hsa-miR-7161-3p 0 1 0
chr14:106578906|106579181 hsa-miR-1908-5p 1 1 0
chr14:106578906|106579181 hsa-miR-6771-5p 1 0 0
chr14:106578906|106579181 hsa-miR-4783-5p 1 0 0
chr14:106578906|106579181 hsa-miR-6780a-3p 0 1 0
chr14:106578906|106579181 hsa-miR-149-3p 1 0 0
chr14:106578906|106579181 hsa-miR-6824-5p 1 0 0
chr14:106578906|106579181 hsa-miR-6789-5p 1 0 0
chr14:106578906|106579181 hsa-miR-4740-5p 0 1 0
chr14:106578906|106579181 hsa-miR-597-3p 0 1 0
chr14:106578906|106579181 hsa-miR-4680-5p 0 1 0
chr14:106578906|106579181 hsa-miR-335-3p 0 1 0
chr14:106578906|106579181 hsa-miR-5587-3p 0 1 0
chr14:106578906|106579181 hsa-miR-6722-5p 0 1 0
chr14:106578906|106579181 hsa-miR-500a-3p 1 1 0
chr14:106578906|106579181 hsa-miR-1207-5p 1 0 0
chr14:106578906|106579181 hsa-miR-4763-3p 1 0 0
chr14:106578906|106579181 hsa-miR-6870-5p 1 1 0
chr14:106578906|106579181 hsa-miR-6803-5p 1 0 0
chr14:106578906|106579181 hsa-miR-6879-5p 1 0 0
chr14:106578906|106579181 hsa-miR-7111-5p 1 0 0
chr14:106578906|106579181 hsa-miR-328-5p 1 0 0
chr14:106578906|106579181 hsa-miR-4649-5p 1 1 0
chr14:106578906|106579181 hsa-miR-4685-5p 1 0 0
chr14:106578906|106579181 hsa-miR-6729-5p 1 1 0
chr14:106578906|106579181 hsa-miR-6795-5p 1 0 0
chr14:106578906|106579181 hsa-miR-4723-5p 1 1 0
chr14:106578906|106579181 hsa-miR-3199 1 1 0
chr14:106578906|106579181 hsa-miR-10396a-3p 1 0 0
chr14:106578906|106579181 hsa-miR-10396b-3p 1 0 0
chr14:106578906|106579181 hsa-miR-4665-5p 0 1 0
chr14:106578906|106579181 hsa-miR-6785-5p 1 1 0
chr14:106578906|106579181 hsa-miR-502-3p 1 1 0
chr14:106578906|106579181 hsa-miR-6855-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:106578906|106579181
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKG
Nucleotide Sequence CTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGC
CircID chr14:106578906|106579181
ORF Type ORF2
Protein Length 57
Nucleotide Length 174
Protein Sequence MGSTAILALLLAVLQGQSCRGLEVTEENGWKGAPDSNFVSPPQESVPRCSWCSLEQR
Nucleotide Sequence ATGGGGTCAACCGCCATCCTCGCCCTCCTCCTGGCTGTTCTCCAAGGTCAGTCCTGCCGAGGGCTTGAGGTCACAGAGGAGAACGGGTGGAAAGGAGCCCCTGATTCAAATTTTGTGTCTCCCCCACAGGAGTCTGTGCCGAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGA
CircID chr14:106578906|106579181
ORF Type ORF3
Protein Length 57
Nucleotide Length 174
Protein Sequence MFSKVSPAEGLRSQRRTGGKEPLIQILCLPHRSLCRGAAGAVWSRGEKARGVSEDLL
Nucleotide Sequence CTGTTCTCCAAGGTCAGTCCTGCCGAGGGCTTGAGGTCACAGAGGAGAACGGGTGGAAAGGAGCCCCTGATTCAAATTTTGTGTCTCCCCCACAGGAGTCTGTGCCGAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAA
CircID chr14:106578906|106579181
ORF Type ORF4
Protein Length 69
Nucleotide Length 210
Protein Sequence MAHPADPVAGKAVSRTLTGDLQRLPGLFHLCSRLHQLHLGTDSCGGDTKFESGAPFHPFSSVTSSPRQD
Nucleotide Sequence CTGGCGCACCCAGCCGATCCAGTAGCTGGTAAAGCTGTATCCAGAACCCTTACAGGAGATCTTCAGAGACTCCCCGGGCTTTTTCACCTCTGCTCCAGACTGCACCAGCTGCACCTCGGCACAGACTCCTGTGGGGGAGACACAAAATTTGAATCAGGGGCTCCTTTCCACCCGTTCTCCTCTGTGACCTCAAGCCCTCGGCAGGACTGA
CircID chr14:106578906|106579181
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MVKLYPEPLQEIFRDSPGFFTSAPDCTSCTSAQTPVGETQNLNQGLLSTRSPL
Nucleotide Sequence CTGGTAAAGCTGTATCCAGAACCCTTACAGGAGATCTTCAGAGACTCCCCGGGCTTTTTCACCTCTGCTCCAGACTGCACCAGCTGCACCTCGGCACAGACTCCTGTGGGGGAGACACAAAATTTGAATCAGGGGCTCCTTTCCACCCGTTCTCCTCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab