CircRNA Information

General Information
circRNA Basic Information
CircID chr14:106578991|106579215
Strand -
CircType exon
Host Gene ENSG00000211966.2;
Algorism CIRI2;
Sequence TCCCCGGGCTTTTTCACCTCTGCTCCAGACTGCACCAGCTGCACCTCGGCACAGACTCCTGTGGGGGAGACACAAAATTTGAATCAGGGGCTCCTTTCCACCCGTTCTCCTCTGTGACCTCAAGCCCTCGGCAGGACTGACCTTGGAGAACAGCCAGGAGGAGGGCGAGGATGGCGGTTGACCCCATGATGGTGGAGGACAGAAAATGAAGCCCTGAGATCCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:106578991|106579215 hsa-miR-579-5p 0 0 1
chr14:106578991|106579215 hsa-miR-579-3p 0 0 1
chr14:106578991|106579215 hsa-miR-592 0 0 1
chr14:106578991|106579215 hsa-miR-599 0 0 1
chr14:106578991|106579215 hsa-miR-607 0 0 1
chr14:106578991|106579215 hsa-miR-622 0 1 1
chr14:106578991|106579215 hsa-miR-638 1 0 1
chr14:106578991|106579215 hsa-miR-1301-5p 0 0 1
chr14:106578991|106579215 hsa-miR-1301-3p 0 0 1
chr14:106578991|106579215 hsa-miR-1249-5p 0 0 1
chr14:106578991|106579215 hsa-miR-1249-3p 0 0 1
chr14:106578991|106579215 hsa-miR-1266-5p 0 0 1
chr14:106578991|106579215 hsa-miR-1266-3p 0 0 1
chr14:106578991|106579215 hsa-miR-1225-3p 1 1 1
chr14:106578991|106579215 hsa-miR-615-5p 0 0 1
chr14:106578991|106579215 hsa-miR-361-3p 0 0 1
chr14:106578991|106579215 hsa-miR-1207-3p 0 0 1
chr14:106578991|106579215 hsa-miR-769-3p 1 1 1
chr14:106578991|106579215 hsa-miR-455-3p 0 0 1
chr14:106578991|106579215 hsa-miR-450b-3p 0 0 1
chr14:106578991|106579215 hsa-miR-515-5p 0 0 1
chr14:106578991|106579215 hsa-miR-1308 0 0 1
chr14:106578991|106579215 hsa-miR-138 0 0 1
chr14:106578991|106579215 hsa-miR-516b 0 0 1
chr14:106578991|106579215 hsa-miR-637 1 0 0
chr14:106578991|106579215 hsa-miR-658 1 0 0
chr14:106578991|106579215 hsa-miR-3197 1 0 0
chr14:106578991|106579215 hsa-miR-4257 0 1 0
chr14:106578991|106579215 hsa-miR-4280 1 0 0
chr14:106578991|106579215 hsa-miR-3665 1 0 0
chr14:106578991|106579215 hsa-miR-4430 1 0 0
chr14:106578991|106579215 hsa-miR-3135b 1 0 0
chr14:106578991|106579215 hsa-miR-4466 1 0 0
chr14:106578991|106579215 hsa-miR-4518 0 1 0
chr14:106578991|106579215 hsa-miR-3978 0 1 0
chr14:106578991|106579215 hsa-miR-4656 1 0 0
chr14:106578991|106579215 hsa-miR-4660 1 0 0
chr14:106578991|106579215 hsa-miR-4683 1 0 0
chr14:106578991|106579215 hsa-miR-4688 1 0 0
chr14:106578991|106579215 hsa-miR-4721 1 1 0
chr14:106578991|106579215 hsa-miR-4739 1 0 0
chr14:106578991|106579215 hsa-miR-5047 0 1 0
chr14:106578991|106579215 hsa-miR-5193 0 1 0
chr14:106578991|106579215 hsa-miR-5787 1 0 0
chr14:106578991|106579215 hsa-miR-6081 0 1 0
chr14:106578991|106579215 hsa-miR-6131 1 0 0
chr14:106578991|106579215 hsa-miR-6745 0 1 0
chr14:106578991|106579215 hsa-miR-12122 0 1 0
chr14:106578991|106579215 hsa-miR-138-5p 1 1 0
chr14:106578991|106579215 hsa-miR-143-5p 1 1 0
chr14:106578991|106579215 hsa-miR-26b-3p 0 1 0
chr14:106578991|106579215 hsa-miR-150-3p 1 0 0
chr14:106578991|106579215 hsa-miR-4687-3p 1 0 0
chr14:106578991|106579215 hsa-miR-1233-3p 1 0 0
chr14:106578991|106579215 hsa-miR-210-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6510-5p 0 1 0
chr14:106578991|106579215 hsa-miR-6728-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6089 1 0 0
chr14:106578991|106579215 hsa-miR-4722-5p 1 1 0
chr14:106578991|106579215 hsa-miR-3064-5p 0 1 0
chr14:106578991|106579215 hsa-miR-7160-5p 1 0 0
chr14:106578991|106579215 hsa-miR-296-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6776-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6726-3p 0 1 0
chr14:106578991|106579215 hsa-miR-6772-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6827-5p 1 0 0
chr14:106578991|106579215 hsa-miR-2467-3p 1 1 0
chr14:106578991|106579215 hsa-miR-6782-5p 0 1 0
chr14:106578991|106579215 hsa-miR-6772-3p 1 0 0
chr14:106578991|106579215 hsa-miR-5010-3p 0 1 0
chr14:106578991|106579215 hsa-miR-3127-5p 0 1 0
chr14:106578991|106579215 hsa-miR-6847-5p 0 1 0
chr14:106578991|106579215 hsa-miR-2681-3p 0 1 0
chr14:106578991|106579215 hsa-miR-5196-3p 0 1 0
chr14:106578991|106579215 hsa-miR-4667-3p 0 1 0
chr14:106578991|106579215 hsa-miR-6736-3p 1 0 0
chr14:106578991|106579215 hsa-miR-3158-3p 0 1 0
chr14:106578991|106579215 hsa-miR-4749-3p 1 0 0
chr14:106578991|106579215 hsa-miR-6795-3p 1 0 0
chr14:106578991|106579215 hsa-miR-18a-5p 1 1 0
chr14:106578991|106579215 hsa-miR-7152-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6865-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6743-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6769a-5p 1 0 0
chr14:106578991|106579215 hsa-miR-7107-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6722-3p 1 0 0
chr14:106578991|106579215 hsa-miR-6797-5p 1 0 0
chr14:106578991|106579215 hsa-miR-320a-5p 0 1 0
chr14:106578991|106579215 hsa-miR-328-5p 1 0 0
chr14:106578991|106579215 hsa-miR-4685-5p 1 0 0
chr14:106578991|106579215 hsa-miR-4726-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6738-5p 1 0 0
chr14:106578991|106579215 hsa-miR-675-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6846-5p 1 0 0
chr14:106578991|106579215 hsa-miR-6885-5p 1 0 0
chr14:106578991|106579215 hsa-miR-4747-5p 1 0 0
chr14:106578991|106579215 hsa-miR-18b-5p 1 1 0
chr14:106578991|106579215 hsa-miR-6792-3p 1 0 0
chr14:106578991|106579215 hsa-miR-10401-3p 0 1 0
chr14:106578991|106579215 hsa-miR-6819-3p 1 0 0
chr14:106578991|106579215 hsa-miR-6823-3p 1 0 0
chr14:106578991|106579215 hsa-miR-4691-5p 0 1 0
chr14:106578991|106579215 hsa-miR-619-5p 0 1 0
chr14:106578991|106579215 hsa-miR-4769-3p 1 1 0
chr14:106578991|106579215 hsa-miR-6504-5p 0 1 0
chr14:106578991|106579215 hsa-miR-7156-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:106578991|106579215
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MHQLHLGTDSCGGDTKFESGAPFHPFSSVTSSPRQD
Nucleotide Sequence CTGCACCAGCTGCACCTCGGCACAGACTCCTGTGGGGGAGACACAAAATTTGAATCAGGGGCTCCTTTCCACCCGTTCTCCTCTGTGACCTCAAGCCCTCGGCAGGACTGA
CircID chr14:106578991|106579215
ORF Type ORF2
Protein Length 75
Nucleotide Length 225
Protein Sequence LGSQGFIFCPPPSWGQPPSSPSSWLFSKVSPAEGLRSQRRTGGKEPLIQILCLPHRSLCRGAAGAVWSRGEKARG
Nucleotide Sequence CTGGGATCTCAGGGCTTCATTTTCTGTCCTCCACCATCATGGGGTCAACCGCCATCCTCGCCCTCCTCCTGGCTGTTCTCCAAGGTCAGTCCTGCCGAGGGCTTGAGGTCACAGAGGAGAACGGGTGGAAAGGAGCCCCTGATTCAAATTTTGTGTCTCCCCCACAGGAGTCTGTGCCGAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGA
CircID chr14:106578991|106579215
ORF Type ORF3
Protein Length 62
Nucleotide Length 189
Protein Sequence MSSTIMGSTAILALLLAVLQGQSCRGLEVTEENGWKGAPDSNFVSPPQESVPRCSWCSLEQR
Nucleotide Sequence CTGTCCTCCACCATCATGGGGTCAACCGCCATCCTCGCCCTCCTCCTGGCTGTTCTCCAAGGTCAGTCCTGCCGAGGGCTTGAGGTCACAGAGGAGAACGGGTGGAAAGGAGCCCCTGATTCAAATTTTGTGTCTCCCCCACAGGAGTCTGTGCCGAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab