CircRNA Information

General Information
circRNA Basic Information
CircID chr14:20447422|20447680
Strand -
CircType exon
Host Gene ENSG00000092094.9;
Algorism CIRI2;
Sequence CTCTGTGTAACCCCAGAATCACTGAGTGGGGTCCTGTGTCCAGCCCGAAACATCTCCCAGCCAGCCTGGGCTATCATCGCTCCATTGTCAATACAGAATCTGGGATGCAAGAGAGATGAAAATTGGGATCTAAGGGTGGAAAATCACTATAACAGGAGAAGTAAAAAAGAAACCAAAGGGAAAGTGTCTTTACCTCTCATCTGTAGCAAAAAGCCGGGCTCCACGTTCCTGGCACATTGTTGCCATCATCTCCTGTAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:20447422|20447680 hsa-miR-204-5p 0 0 1
chr14:20447422|20447680 hsa-miR-204-3p 0 0 1
chr14:20447422|20447680 hsa-miR-211-5p 0 0 1
chr14:20447422|20447680 hsa-miR-211-3p 0 0 1
chr14:20447422|20447680 hsa-miR-221-5p 0 0 1
chr14:20447422|20447680 hsa-miR-221-3p 0 0 1
chr14:20447422|20447680 hsa-miR-222-5p 0 0 1
chr14:20447422|20447680 hsa-miR-222-3p 0 0 1
chr14:20447422|20447680 hsa-miR-143-5p 0 0 1
chr14:20447422|20447680 hsa-miR-143-3p 0 0 1
chr14:20447422|20447680 hsa-miR-623 0 0 1
chr14:20447422|20447680 hsa-miR-637 1 1 1
chr14:20447422|20447680 hsa-miR-659-5p 0 0 1
chr14:20447422|20447680 hsa-miR-659-3p 0 0 1
chr14:20447422|20447680 hsa-miR-873-5p 0 0 1
chr14:20447422|20447680 hsa-miR-873-3p 0 0 1
chr14:20447422|20447680 hsa-miR-1227-5p 0 0 1
chr14:20447422|20447680 hsa-miR-1227-3p 0 0 1
chr14:20447422|20447680 hsa-miR-129-5p 0 0 1
chr14:20447422|20447680 hsa-miR-324-5p 0 0 1
chr14:20447422|20447680 hsa-miR-455-5p 0 0 1
chr14:20447422|20447680 hsa-miR-9 0 0 1
chr14:20447422|20447680 hsa-miR-1245 0 0 1
chr14:20447422|20447680 hsa-miR-762 1 1 0
chr14:20447422|20447680 hsa-miR-3170 0 1 0
chr14:20447422|20447680 hsa-miR-3651 0 1 0
chr14:20447422|20447680 hsa-miR-3652 1 0 0
chr14:20447422|20447680 hsa-miR-4425 1 0 0
chr14:20447422|20447680 hsa-miR-4478 1 0 0
chr14:20447422|20447680 hsa-miR-4492 0 1 0
chr14:20447422|20447680 hsa-miR-4498 1 1 0
chr14:20447422|20447680 hsa-miR-4505 1 1 0
chr14:20447422|20447680 hsa-miR-4525 1 0 0
chr14:20447422|20447680 hsa-miR-1587 1 0 0
chr14:20447422|20447680 hsa-miR-4706 1 0 0
chr14:20447422|20447680 hsa-miR-4741 1 0 0
chr14:20447422|20447680 hsa-miR-5705 0 1 0
chr14:20447422|20447680 hsa-miR-5787 1 0 0
chr14:20447422|20447680 hsa-miR-6165 1 0 0
chr14:20447422|20447680 hsa-miR-8062 0 1 0
chr14:20447422|20447680 hsa-miR-12115 1 0 0
chr14:20447422|20447680 hsa-miR-12120 1 1 0
chr14:20447422|20447680 hsa-miR-12121 1 0 0
chr14:20447422|20447680 hsa-miR-140-5p 0 1 0
chr14:20447422|20447680 hsa-miR-4700-3p 0 1 0
chr14:20447422|20447680 hsa-miR-1247-3p 1 0 0
chr14:20447422|20447680 hsa-miR-671-5p 1 0 0
chr14:20447422|20447680 hsa-miR-3150a-3p 1 0 0
chr14:20447422|20447680 hsa-miR-6894-5p 1 0 0
chr14:20447422|20447680 hsa-miR-6799-5p 1 1 0
chr14:20447422|20447680 hsa-miR-3192-5p 0 1 0
chr14:20447422|20447680 hsa-miR-4722-5p 1 0 0
chr14:20447422|20447680 hsa-miR-3064-5p 0 1 0
chr14:20447422|20447680 hsa-miR-8069 1 0 0
chr14:20447422|20447680 hsa-miR-1292-5p 1 0 0
chr14:20447422|20447680 hsa-miR-656-5p 1 0 0
chr14:20447422|20447680 hsa-miR-6798-5p 1 0 0
chr14:20447422|20447680 hsa-miR-6888-5p 0 1 0
chr14:20447422|20447680 hsa-miR-6815-3p 1 0 0
chr14:20447422|20447680 hsa-miR-3934-3p 1 0 0
chr14:20447422|20447680 hsa-miR-3944-3p 0 1 0
chr14:20447422|20447680 hsa-miR-4638-3p 0 1 0
chr14:20447422|20447680 hsa-miR-4446-3p 1 0 0
chr14:20447422|20447680 hsa-miR-6824-5p 1 0 0
chr14:20447422|20447680 hsa-miR-1245b-3p 0 1 0
chr14:20447422|20447680 hsa-miR-3620-3p 1 0 0
chr14:20447422|20447680 hsa-miR-1207-5p 1 0 0
chr14:20447422|20447680 hsa-miR-5001-5p 1 1 0
chr14:20447422|20447680 hsa-miR-6779-5p 1 0 0
chr14:20447422|20447680 hsa-miR-3620-5p 1 0 0
chr14:20447422|20447680 hsa-miR-6766-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:20447422|20447680
ORF Type ORF1
Protein Length 78
Nucleotide Length 237
Protein Sequence MSGVLCPARNISQPAWAIIAPLSIQNLGCKRDENWDLRVENHYNRRSKKETKGKVSLPLICSKKPGSTFLAHCCHHLL
Nucleotide Sequence CTGAGTGGGGTCCTGTGTCCAGCCCGAAACATCTCCCAGCCAGCCTGGGCTATCATCGCTCCATTGTCAATACAGAATCTGGGATGCAAGAGAGATGAAAATTGGGATCTAAGGGTGGAAAATCACTATAACAGGAGAAGTAAAAAAGAAACCAAAGGGAAAGTGTCTTTACCTCTCATCTGTAGCAAAAAGCCGGGCTCCACGTTCCTGGCACATTGTTGCCATCATCTCCTGTAG

CircID chr14:20447422|20447680
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence LCNPRITEWGPVSSPKHLPASLGYHRSIVNTESGMQER
Nucleotide Sequence CTGTGTAACCCCAGAATCACTGAGTGGGGTCCTGTGTCCAGCCCGAAACATCTCCCAGCCAGCCTGGGCTATCATCGCTCCATTGTCAATACAGAATCTGGGATGCAAGAGAGATGA

CircID chr14:20447422|20447680
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MHPRFCIDNGAMIAQAGWEMFRAGHRTPLSDSGVTQ
Nucleotide Sequence TTGCATCCCAGATTCTGTATTGACAATGGAGCGATGATAGCCCAGGCTGGCTGGGAGATGTTTCGGGCTGGACACAGGACCCCACTCAGTGATTCTGGGGTTACACAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites