CircRNA Information

General Information
circRNA Basic Information
CircID chr14:20456708|20457042
Strand +
CircType exon
Host Gene ENSG00000100823.10;
Algorism CIRI2;
Sequence GAGTCAAATTCAGCCACAATCACCCGGCCTTCCTGATCATGCTCCTCATCGCCTATAGAAATGAAACAGAATTAGCATAAAAAACTATAAGAAAAGGGAAAGCAATCAAGAGGTGGGGCAGAGATAGAGAATTAGCAATTGGTTTTGAAGAGTTCAGGCATTAGGCATCAATAGGGTCTCACCTATGCCGTAAGAAACTTTGAGTGGGCACTGGCGGGAAAGCAGGCCCACGCCACTGTACCCTTCCTTGTCCGAAGGAGCTGACCAGTATTGATGAGAGAGTCCAGGCAGCTCCTGAAGTTCAGCTGGTAGTTTGTTCTCTGAACATTTGGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:20456708|20457042 hsa-miR-22-5p 0 0 1
chr14:20456708|20457042 hsa-miR-22-3p 0 0 1
chr14:20456708|20457042 hsa-miR-204-5p 0 0 1
chr14:20456708|20457042 hsa-miR-204-3p 0 0 1
chr14:20456708|20457042 hsa-miR-211-5p 0 0 1
chr14:20456708|20457042 hsa-miR-211-3p 0 0 1
chr14:20456708|20457042 hsa-miR-200b-5p 0 0 1
chr14:20456708|20457042 hsa-miR-200b-3p 0 0 1
chr14:20456708|20457042 hsa-miR-200c-5p 0 0 1
chr14:20456708|20457042 hsa-miR-200c-3p 0 0 1
chr14:20456708|20457042 hsa-miR-383-5p 0 0 1
chr14:20456708|20457042 hsa-miR-383-3p 0 0 1
chr14:20456708|20457042 hsa-miR-422a 1 0 1
chr14:20456708|20457042 hsa-miR-429 0 0 1
chr14:20456708|20457042 hsa-miR-495-5p 0 0 1
chr14:20456708|20457042 hsa-miR-495-3p 0 0 1
chr14:20456708|20457042 hsa-miR-520g-5p 0 0 1
chr14:20456708|20457042 hsa-miR-520g-3p 0 0 1
chr14:20456708|20457042 hsa-miR-520h 0 0 1
chr14:20456708|20457042 hsa-miR-558 0 0 1
chr14:20456708|20457042 hsa-miR-561-5p 0 0 1
chr14:20456708|20457042 hsa-miR-561-3p 0 0 1
chr14:20456708|20457042 hsa-miR-579-5p 0 0 1
chr14:20456708|20457042 hsa-miR-579-3p 0 0 1
chr14:20456708|20457042 hsa-miR-623 0 0 1
chr14:20456708|20457042 hsa-miR-634 0 0 1
chr14:20456708|20457042 hsa-miR-661 0 0 1
chr14:20456708|20457042 hsa-miR-1323 0 0 1
chr14:20456708|20457042 hsa-miR-888-5p 0 0 1
chr14:20456708|20457042 hsa-miR-888-3p 0 0 1
chr14:20456708|20457042 hsa-miR-708-5p 0 0 1
chr14:20456708|20457042 hsa-miR-708-3p 0 0 1
chr14:20456708|20457042 hsa-miR-873-5p 0 0 1
chr14:20456708|20457042 hsa-miR-873-3p 0 0 1
chr14:20456708|20457042 hsa-miR-548o-3p 0 0 1
chr14:20456708|20457042 hsa-miR-302f 0 0 1
chr14:20456708|20457042 hsa-miR-1825 0 1 1
chr14:20456708|20457042 hsa-miR-548o 0 0 1
chr14:20456708|20457042 hsa-miR-769-5p 0 0 1
chr14:20456708|20457042 hsa-miR-1224-3p 0 1 1
chr14:20456708|20457042 hsa-miR-28-5p 0 0 1
chr14:20456708|20457042 hsa-miR-324-3p 0 0 1
chr14:20456708|20457042 hsa-miR-491-3p 0 0 1
chr14:20456708|20457042 hsa-miR-508-3p 0 0 1
chr14:20456708|20457042 hsa-miR-378 0 0 1
chr14:20456708|20457042 hsa-miR-1254 0 0 1
chr14:20456708|20457042 hsa-miR-1201 0 0 1
chr14:20456708|20457042 hsa-miR-219-5p 0 0 1
chr14:20456708|20457042 hsa-miR-365 0 0 1
chr14:20456708|20457042 hsa-miR-1183 1 1 0
chr14:20456708|20457042 hsa-miR-1267 0 1 0
chr14:20456708|20457042 hsa-miR-1913 1 0 0
chr14:20456708|20457042 hsa-miR-2861 1 0 0
chr14:20456708|20457042 hsa-miR-3141 1 0 0
chr14:20456708|20457042 hsa-miR-4258 0 1 0
chr14:20456708|20457042 hsa-miR-4270 1 0 0
chr14:20456708|20457042 hsa-miR-3919 0 1 0
chr14:20456708|20457042 hsa-miR-4448 0 1 0
chr14:20456708|20457042 hsa-miR-4476 0 1 0
chr14:20456708|20457042 hsa-miR-4539 0 1 0
chr14:20456708|20457042 hsa-miR-4663 0 1 0
chr14:20456708|20457042 hsa-miR-4689 0 1 0
chr14:20456708|20457042 hsa-miR-4739 1 0 0
chr14:20456708|20457042 hsa-miR-4775 0 1 0
chr14:20456708|20457042 hsa-miR-12113 0 1 0
chr14:20456708|20457042 hsa-miR-671-5p 1 0 0
chr14:20456708|20457042 hsa-miR-6089 1 0 0
chr14:20456708|20457042 hsa-miR-4722-5p 1 0 0
chr14:20456708|20457042 hsa-miR-4474-3p 0 1 0
chr14:20456708|20457042 hsa-miR-3189-5p 1 0 0
chr14:20456708|20457042 hsa-miR-5589-5p 1 0 0
chr14:20456708|20457042 hsa-miR-7110-3p 1 0 0
chr14:20456708|20457042 hsa-miR-6728-3p 1 0 0
chr14:20456708|20457042 hsa-miR-6882-3p 1 1 0
chr14:20456708|20457042 hsa-miR-939-3p 1 0 0
chr14:20456708|20457042 hsa-miR-4640-5p 1 0 0
chr14:20456708|20457042 hsa-miR-4743-5p 1 0 0
chr14:20456708|20457042 hsa-miR-6717-5p 0 1 0
chr14:20456708|20457042 hsa-miR-6830-5p 0 1 0
chr14:20456708|20457042 hsa-miR-6781-5p 1 0 0
chr14:20456708|20457042 hsa-miR-4776-5p 1 0 0
chr14:20456708|20457042 hsa-miR-6889-3p 1 0 0
chr14:20456708|20457042 hsa-miR-3180-5p 1 0 0
chr14:20456708|20457042 hsa-miR-4758-3p 1 1 0
chr14:20456708|20457042 hsa-miR-3184-3p 0 1 0
chr14:20456708|20457042 hsa-miR-371b-3p 0 1 0
chr14:20456708|20457042 hsa-miR-6775-5p 1 0 0
chr14:20456708|20457042 hsa-miR-6754-5p 1 0 0
chr14:20456708|20457042 hsa-miR-5196-5p 1 0 0
chr14:20456708|20457042 hsa-miR-6780b-5p 1 0 0
chr14:20456708|20457042 hsa-miR-4701-3p 1 0 0
chr14:20456708|20457042 hsa-miR-4725-3p 1 0 0
chr14:20456708|20457042 hsa-miR-6858-5p 0 1 0
chr14:20456708|20457042 hsa-miR-6876-5p 0 1 0
chr14:20456708|20457042 hsa-miR-6750-5p 1 0 0
chr14:20456708|20457042 hsa-miR-6785-5p 1 0 0
chr14:20456708|20457042 hsa-miR-5009-5p 0 1 0
chr14:20456708|20457042 hsa-miR-10400-3p 1 0 0
chr14:20456708|20457042 hsa-miR-4680-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:20456708|20457042
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MTSIDERVQAAPEVQLVVCSLNIWS
Nucleotide Sequence CTGACCAGTATTGATGAGAGAGTCCAGGCAGCTCCTGAAGTTCAGCTGGTAGTTTGTTCTCTGAACATTTGGTCT

CircID chr14:20456708|20457042
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MNFRSCLDSLINTGQLLRTRKGTVAWACFPASAHSKFLTA
Nucleotide Sequence CTGAACTTCAGGAGCTGCCTGGACTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAG

CircID chr14:20456708|20457042
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MVSSFGQGRVQWRGPAFPPVPTQSFLRHR
Nucleotide Sequence CTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGGTGA

CircID chr14:20456708|20457042
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MNSSKPIANSLSLPHLLIAFPFLIVFYANSVSFL
Nucleotide Sequence CTGAACTCTTCAAAACCAATTGCTAATTCTCTATCTCTGCCCCACCTCTTGATTGCTTTCCCTTTTCTTATAGTTTTTTATGCTAATTCTGTTTCATTTCTATAG

CircID chr14:20456708|20457042
ORF Type ORF5
Protein Length 45
Nucleotide Length 138
Protein Sequence MPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGETLLMPNA
Nucleotide Sequence CTGCCTGGACTCTCTCATCAATACTGGTCAGCTCCTTCGGACAAGGAAGGGTACAGTGGCGTGGGCCTGCTTTCCCGCCAGTGCCCACTCAAAGTTTCTTACGGCATAGGTGAGACCCTATTGATGCCTAATGCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites