CircRNA Information

General Information
circRNA Basic Information
CircID chr14:20476537|20476771
Strand -
CircType exon
Host Gene ENSG00000198805.10;
Algorism CIRI2;
Sequence AGAAATTGGAACAGTTTGTCTCCATTCTTATGGCCAGCATTCCACTCCCTGACAAAGCCAGTTGACCTGCCTTGGAGTCGTCTGGCATCTCCCACACAAGACCCAAGTAGCTGCTACCTTCTTTGGCCCCTTGCTGGAGTCATGTGCCTCTGTCCTTAGGTTGTAGCAGAAAGGAAAAGATTCCTGTCCTTCACCTTTCCCACTTTCTTCTACCAGACCCTTCTGGTGCCAGATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:20476537|20476771 hsa-miR-15a-5p 0 0 1
chr14:20476537|20476771 hsa-miR-15a-3p 0 0 1
chr14:20476537|20476771 hsa-miR-221-5p 0 0 1
chr14:20476537|20476771 hsa-miR-221-3p 0 0 1
chr14:20476537|20476771 hsa-miR-222-5p 0 0 1
chr14:20476537|20476771 hsa-miR-222-3p 0 0 1
chr14:20476537|20476771 hsa-miR-15b-5p 0 0 1
chr14:20476537|20476771 hsa-miR-15b-3p 0 0 1
chr14:20476537|20476771 hsa-miR-195-5p 0 0 1
chr14:20476537|20476771 hsa-miR-195-3p 0 0 1
chr14:20476537|20476771 hsa-miR-206 0 0 1
chr14:20476537|20476771 hsa-miR-379-5p 0 0 1
chr14:20476537|20476771 hsa-miR-379-3p 0 0 1
chr14:20476537|20476771 hsa-miR-424-5p 0 0 1
chr14:20476537|20476771 hsa-miR-424-3p 0 0 1
chr14:20476537|20476771 hsa-miR-497-5p 0 0 1
chr14:20476537|20476771 hsa-miR-497-3p 0 0 1
chr14:20476537|20476771 hsa-miR-503-5p 0 0 1
chr14:20476537|20476771 hsa-miR-503-3p 0 0 1
chr14:20476537|20476771 hsa-miR-581 0 0 1
chr14:20476537|20476771 hsa-miR-613 0 0 1
chr14:20476537|20476771 hsa-miR-646 1 0 1
chr14:20476537|20476771 hsa-miR-766-5p 0 0 1
chr14:20476537|20476771 hsa-miR-766-3p 0 0 1
chr14:20476537|20476771 hsa-miR-890 0 0 1
chr14:20476537|20476771 hsa-miR-892b 0 0 1
chr14:20476537|20476771 hsa-miR-940 0 0 1
chr14:20476537|20476771 hsa-miR-1182 1 0 1
chr14:20476537|20476771 hsa-miR-548g-5p 0 0 1
chr14:20476537|20476771 hsa-miR-548g-3p 0 0 1
chr14:20476537|20476771 hsa-miR-1252-5p 0 0 1
chr14:20476537|20476771 hsa-miR-1252-3p 0 0 1
chr14:20476537|20476771 hsa-miR-193a-5p 0 0 1
chr14:20476537|20476771 hsa-miR-508-5p 0 0 1
chr14:20476537|20476771 hsa-miR-338-3p 0 0 1
chr14:20476537|20476771 hsa-miR-16 0 0 1
chr14:20476537|20476771 hsa-miR-644 0 0 1
chr14:20476537|20476771 hsa-miR-1 0 0 1
chr14:20476537|20476771 hsa-miR-544 0 0 1
chr14:20476537|20476771 hsa-miR-147 0 0 1
chr14:20476537|20476771 hsa-miR-608 1 0 0
chr14:20476537|20476771 hsa-miR-3185 1 0 0
chr14:20476537|20476771 hsa-miR-3197 1 0 0
chr14:20476537|20476771 hsa-miR-4298 1 0 0
chr14:20476537|20476771 hsa-miR-4253 1 0 0
chr14:20476537|20476771 hsa-miR-3621 1 0 0
chr14:20476537|20476771 hsa-miR-3936 1 0 0
chr14:20476537|20476771 hsa-miR-4510 1 0 0
chr14:20476537|20476771 hsa-miR-4654 1 0 0
chr14:20476537|20476771 hsa-miR-4656 1 0 0
chr14:20476537|20476771 hsa-miR-4688 1 0 0
chr14:20476537|20476771 hsa-miR-4736 1 0 0
chr14:20476537|20476771 hsa-miR-4739 1 0 0
chr14:20476537|20476771 hsa-miR-5194 1 0 0
chr14:20476537|20476771 hsa-miR-6085 1 0 0
chr14:20476537|20476771 hsa-miR-6127 1 0 0
chr14:20476537|20476771 hsa-miR-6130 1 0 0
chr14:20476537|20476771 hsa-miR-6131 1 0 0
chr14:20476537|20476771 hsa-miR-12115 1 0 0
chr14:20476537|20476771 hsa-miR-12128 1 0 0
chr14:20476537|20476771 hsa-miR-4433b-3p 1 0 0
chr14:20476537|20476771 hsa-miR-128-1-5p 1 0 0
chr14:20476537|20476771 hsa-miR-187-5p 1 0 0
chr14:20476537|20476771 hsa-miR-8071 1 0 0
chr14:20476537|20476771 hsa-miR-6833-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6089 1 0 0
chr14:20476537|20476771 hsa-miR-6880-5p 1 0 0
chr14:20476537|20476771 hsa-miR-7847-3p 1 0 0
chr14:20476537|20476771 hsa-miR-4695-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6730-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6721-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6732-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6805-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6798-5p 1 0 0
chr14:20476537|20476771 hsa-miR-2467-3p 1 0 0
chr14:20476537|20476771 hsa-miR-6514-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4640-5p 1 0 0
chr14:20476537|20476771 hsa-miR-3127-5p 1 0 0
chr14:20476537|20476771 hsa-let-7b-5p 1 0 0
chr14:20476537|20476771 hsa-miR-485-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4787-5p 1 0 0
chr14:20476537|20476771 hsa-miR-3162-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6877-5p 1 0 0
chr14:20476537|20476771 hsa-miR-664b-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4727-3p 1 0 0
chr14:20476537|20476771 hsa-miR-652-3p 1 0 0
chr14:20476537|20476771 hsa-miR-1207-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4763-3p 1 0 0
chr14:20476537|20476771 hsa-miR-6778-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6865-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6893-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6737-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6743-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6752-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6754-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6803-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6815-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6819-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6842-5p 1 0 0
chr14:20476537|20476771 hsa-miR-1249-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6797-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6808-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6879-5p 1 0 0
chr14:20476537|20476771 hsa-miR-7111-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4728-5p 1 0 0
chr14:20476537|20476771 hsa-miR-5196-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6780b-5p 1 0 0
chr14:20476537|20476771 hsa-miR-328-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4685-5p 1 0 0
chr14:20476537|20476771 hsa-miR-4726-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6735-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6777-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6845-5p 1 0 0
chr14:20476537|20476771 hsa-miR-3198 1 0 0
chr14:20476537|20476771 hsa-miR-6876-5p 1 0 0
chr14:20476537|20476771 hsa-miR-3184-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6762-5p 1 0 0
chr14:20476537|20476771 hsa-miR-9851-5p 1 0 0
chr14:20476537|20476771 hsa-miR-6859-5p 1 0 0
chr14:20476537|20476771 hsa-miR-664a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:20476537|20476771
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MSPFLWPAFHSLTKPVDLPWSRLASPTQDPSSCYLLWPLAGVMCLCP
Nucleotide Sequence TTGTCTCCATTCTTATGGCCAGCATTCCACTCCCTGACAAAGCCAGTTGACCTGCCTTGGAGTCGTCTGGCATCTCCCACACAAGACCCAAGTAGCTGCTACCTTCTTTGGCCCCTTGCTGGAGTCATGTGCCTCTGTCCTTAG
CircID chr14:20476537|20476771
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MTCLGVVWHLPHKTQVAATFFGPLLESCASVLRL
Nucleotide Sequence TTGACCTGCCTTGGAGTCGTCTGGCATCTCCCACACAAGACCCAAGTAGCTGCTACCTTCTTTGGCCCCTTGCTGGAGTCATGTGCCTCTGTCCTTAGGTTGTAG
CircID chr14:20476537|20476771
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MLPSLAPCWSHVPLSLGCSRKEKIPVLHLSHFLLPDPSGAR
Nucleotide Sequence CTGCTACCTTCTTTGGCCCCTTGCTGGAGTCATGTGCCTCTGTCCTTAGGTTGTAGCAGAAAGGAAAAGATTCCTGTCCTTCACCTTTCCCACTTTCTTCTACCAGACCCTTCTGGTGCCAGA
CircID chr14:20476537|20476771
ORF Type ORF4
Protein Length 35
Nucleotide Length 105
Protein Sequence MGLVWEMPDDSKAGQLALSGSGMLAIRMETNCSNF
Nucleotide Sequence TTGGGTCTTGTGTGGGAGATGCCAGACGACTCCAAGGCAGGTCAACTGGCTTTGTCAGGGAGTGGAATGCTGGCCATAAGAATGGAGACAAACTGTTCCAATTTC
CircID chr14:20476537|20476771
ORF Type ORF5
Protein Length 62
Nucleotide Length 189
Protein Sequence MVEESGKGEGQESFPFCYNLRTEAHDSSKGPKKVAATWVLCGRCQTTPRQVNWLCQGVECWP
Nucleotide Sequence CTGGTAGAAGAAAGTGGGAAAGGTGAAGGACAGGAATCTTTTCCTTTCTGCTACAACCTAAGGACAGAGGCACATGACTCCAGCAAGGGGCCAAAGAAGGTAGCAGCTACTTGGGTCTTGTGTGGGAGATGCCAGACGACTCCAAGGCAGGTCAACTGGCTTTGTCAGGGAGTGGAATGCTGGCCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab