CircRNA Information

General Information
circRNA Basic Information
CircID chr14:21076409|21076643
Strand +
CircType exon
Host Gene ENSG00000165801.8;
Algorism CIRI2;
Sequence CTGAAATCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACAAGGGGAGGATCTCCTGAGTCCTAAGGGCAGAAAAGAATAACCCTAAACTGGGCAATCGGGTGTCCTGGACTGGCCACTGGTGAAGAGTTAGGATCCAGGGGAACTGCCTGTTTGAGGGGTGGTTACCTGAAGTTGGCTCAAGGCAGGAATGAGTGCTGGAGGCAGTGGAGGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:21076409|21076643 hsa-miR-197-5p 0 0 1
chr14:21076409|21076643 hsa-miR-197-3p 0 0 1
chr14:21076409|21076643 hsa-miR-433-5p 0 0 1
chr14:21076409|21076643 hsa-miR-433-3p 0 0 1
chr14:21076409|21076643 hsa-miR-412-5p 0 0 1
chr14:21076409|21076643 hsa-miR-412-3p 0 0 1
chr14:21076409|21076643 hsa-miR-510-5p 0 0 1
chr14:21076409|21076643 hsa-miR-510-3p 0 0 1
chr14:21076409|21076643 hsa-miR-618 0 0 1
chr14:21076409|21076643 hsa-miR-766-5p 0 0 1
chr14:21076409|21076643 hsa-miR-766-3p 0 0 1
chr14:21076409|21076643 hsa-miR-665 0 0 1
chr14:21076409|21076643 hsa-miR-938 0 0 1
chr14:21076409|21076643 hsa-miR-1226-5p 0 0 1
chr14:21076409|21076643 hsa-miR-1226-3p 0 0 1
chr14:21076409|21076643 hsa-miR-1290 0 0 1
chr14:21076409|21076643 hsa-miR-1272 0 1 1
chr14:21076409|21076643 hsa-miR-1197 0 1 1
chr14:21076409|21076643 hsa-miR-296-3p 0 0 1
chr14:21076409|21076643 hsa-miR-331-3p 0 1 1
chr14:21076409|21076643 hsa-miR-338-3p 0 0 1
chr14:21076409|21076643 hsa-miR-324-3p 1 1 1
chr14:21076409|21076643 hsa-miR-455-3p 0 1 1
chr14:21076409|21076643 hsa-miR-876-5p 0 0 1
chr14:21076409|21076643 hsa-miR-371-5p 0 0 1
chr14:21076409|21076643 hsa-miR-544 0 0 1
chr14:21076409|21076643 hsa-miR-923 0 0 1
chr14:21076409|21076643 hsa-miR-623 1 1 0
chr14:21076409|21076643 hsa-miR-1913 1 0 0
chr14:21076409|21076643 hsa-miR-5693 1 0 0
chr14:21076409|21076643 hsa-miR-12113 0 1 0
chr14:21076409|21076643 hsa-miR-6749-3p 0 1 0
chr14:21076409|21076643 hsa-miR-18a-3p 0 1 0
chr14:21076409|21076643 hsa-miR-4768-3p 0 1 0
chr14:21076409|21076643 hsa-miR-3677-5p 0 1 0
chr14:21076409|21076643 hsa-miR-6787-3p 1 0 0
chr14:21076409|21076643 hsa-miR-4793-3p 1 0 0
chr14:21076409|21076643 hsa-miR-6882-3p 1 1 0
chr14:21076409|21076643 hsa-miR-4436b-5p 1 0 0
chr14:21076409|21076643 hsa-miR-548au-3p 0 1 0
chr14:21076409|21076643 hsa-miR-1306-5p 1 1 0
chr14:21076409|21076643 hsa-miR-345-5p 1 0 0
chr14:21076409|21076643 hsa-miR-6887-3p 1 0 0
chr14:21076409|21076643 hsa-miR-5000-3p 0 1 0
chr14:21076409|21076643 hsa-miR-6837-3p 1 0 0
chr14:21076409|21076643 hsa-miR-3074-5p 0 1 0
chr14:21076409|21076643 hsa-miR-6761-3p 1 0 0
chr14:21076409|21076643 hsa-miR-6890-3p 0 1 0
chr14:21076409|21076643 hsa-miR-6509-3p 0 1 0
chr14:21076409|21076643 hsa-miR-3127-3p 1 0 0
chr14:21076409|21076643 hsa-miR-6792-3p 1 0 0
chr14:21076409|21076643 hsa-miR-3117-3p 0 1 0
chr14:21076409|21076643 hsa-miR-627-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:21076409|21076643
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence LKSTEFSWKVIMNENQQPLNKGRIS
Nucleotide Sequence CTGAAATCCACAGAGTTCAGTTGGAAGGTCATCATGAATGAGAATCAGCAGCCGCTGAACAAGGGGAGGATCTCCTGA

CircID chr14:21076409|21076643
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MATGEELGSRGTACLRGGYLKLAQGRNECWRQWRC
Nucleotide Sequence CTGGCCACTGGTGAAGAGTTAGGATCCAGGGGAACTGCCTGTTTGAGGGGTGGTTACCTGAAGTTGGCTCAAGGCAGGAATGAGTGCTGGAGGCAGTGGAGGTGC

CircID chr14:21076409|21076643
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MPPALIPALSQLQVTTPQTGSSPGS
Nucleotide Sequence CTGCCTCCAGCACTCATTCCTGCCTTGAGCCAACTTCAGGTAACCACCCCTCAAACAGGCAGTTCCCCTGGATCCTAA

CircID chr14:21076409|21076643
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MDPNSSPVASPGHPIAQFRVILFCP
Nucleotide Sequence CTGGATCCTAACTCTTCACCAGTGGCCAGTCCAGGACACCCGATTGCCCAGTTTAGGGTTATTCTTTTCTGCCCTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites