CircRNA Information

General Information
circRNA Basic Information
CircID chr14:22770838|22771169
Strand -
CircType exon
Host Gene ENSG00000155463.11;
Algorism CIRI2;
Sequence CTTCAGTGGATGAGAAATGTCATCAGAATGATGCCCCTGATAACCTTGCCCATAACCATGCATTTCCCCACGGTATGTAATGCCTTATGGGCTGGCTCCAAGGCCTTCTGCCTAGCCTAGCCACCTAGCAAGCTGACCAGGGATACAGCTTCTGAGTCCCTTCTCTGTGTTCTCACCCAGGCAGTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAAAATCCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAGGCTTCCTAGAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:22770838|22771169 hsa-miR-198 0 0 1
chr14:22770838|22771169 hsa-miR-141-5p 0 0 1
chr14:22770838|22771169 hsa-miR-141-3p 0 0 1
chr14:22770838|22771169 hsa-miR-146a-5p 0 0 1
chr14:22770838|22771169 hsa-miR-146a-3p 0 0 1
chr14:22770838|22771169 hsa-miR-154-5p 0 0 1
chr14:22770838|22771169 hsa-miR-154-3p 0 0 1
chr14:22770838|22771169 hsa-miR-200a-5p 0 0 1
chr14:22770838|22771169 hsa-miR-200a-3p 0 0 1
chr14:22770838|22771169 hsa-miR-432-5p 0 0 1
chr14:22770838|22771169 hsa-miR-432-3p 0 0 1
chr14:22770838|22771169 hsa-miR-506-5p 0 0 1
chr14:22770838|22771169 hsa-miR-506-3p 0 0 1
chr14:22770838|22771169 hsa-miR-570-5p 0 0 1
chr14:22770838|22771169 hsa-miR-570-3p 0 0 1
chr14:22770838|22771169 hsa-miR-575 0 0 1
chr14:22770838|22771169 hsa-miR-589-5p 0 0 1
chr14:22770838|22771169 hsa-miR-589-3p 0 0 1
chr14:22770838|22771169 hsa-miR-625-5p 0 0 1
chr14:22770838|22771169 hsa-miR-625-3p 0 0 1
chr14:22770838|22771169 hsa-miR-637 0 1 1
chr14:22770838|22771169 hsa-miR-645 0 0 1
chr14:22770838|22771169 hsa-miR-661 0 0 1
chr14:22770838|22771169 hsa-miR-765 0 0 1
chr14:22770838|22771169 hsa-miR-298 0 0 1
chr14:22770838|22771169 hsa-miR-890 0 0 1
chr14:22770838|22771169 hsa-miR-940 0 0 1
chr14:22770838|22771169 hsa-miR-1203 1 0 1
chr14:22770838|22771169 hsa-miR-1287-5p 0 0 1
chr14:22770838|22771169 hsa-miR-1287-3p 0 0 1
chr14:22770838|22771169 hsa-miR-1290 1 0 1
chr14:22770838|22771169 hsa-miR-1251-5p 0 0 1
chr14:22770838|22771169 hsa-miR-1251-3p 0 0 1
chr14:22770838|22771169 hsa-miR-1262 0 1 1
chr14:22770838|22771169 hsa-miR-1275 1 0 1
chr14:22770838|22771169 hsa-miR-671-5p 1 1 1
chr14:22770838|22771169 hsa-miR-770-5p 0 1 1
chr14:22770838|22771169 hsa-miR-491-5p 0 0 1
chr14:22770838|22771169 hsa-miR-361-5p 0 0 1
chr14:22770838|22771169 hsa-miR-188-5p 0 0 1
chr14:22770838|22771169 hsa-miR-146b-5p 0 0 1
chr14:22770838|22771169 hsa-miR-124 0 0 1
chr14:22770838|22771169 hsa-miR-1254 0 0 1
chr14:22770838|22771169 hsa-miR-768-5p 0 0 1
chr14:22770838|22771169 hsa-miR-601 1 0 0
chr14:22770838|22771169 hsa-miR-612 0 1 0
chr14:22770838|22771169 hsa-miR-762 1 0 0
chr14:22770838|22771169 hsa-miR-1183 1 0 0
chr14:22770838|22771169 hsa-miR-1268a 1 0 0
chr14:22770838|22771169 hsa-miR-3154 0 1 0
chr14:22770838|22771169 hsa-miR-4297 0 1 0
chr14:22770838|22771169 hsa-miR-4298 1 0 0
chr14:22770838|22771169 hsa-miR-4270 1 0 0
chr14:22770838|22771169 hsa-miR-3919 0 1 0
chr14:22770838|22771169 hsa-miR-1268b 1 0 0
chr14:22770838|22771169 hsa-miR-4450 0 1 0
chr14:22770838|22771169 hsa-miR-4493 0 1 0
chr14:22770838|22771169 hsa-miR-4505 1 0 0
chr14:22770838|22771169 hsa-miR-4525 1 0 0
chr14:22770838|22771169 hsa-miR-4654 1 0 0
chr14:22770838|22771169 hsa-miR-4669 1 0 0
chr14:22770838|22771169 hsa-miR-4688 0 1 0
chr14:22770838|22771169 hsa-miR-4689 1 0 0
chr14:22770838|22771169 hsa-miR-4706 1 0 0
chr14:22770838|22771169 hsa-miR-4736 1 0 0
chr14:22770838|22771169 hsa-miR-4739 1 0 0
chr14:22770838|22771169 hsa-miR-4784 0 1 0
chr14:22770838|22771169 hsa-miR-5685 0 1 0
chr14:22770838|22771169 hsa-miR-6069 1 0 0
chr14:22770838|22771169 hsa-miR-6075 0 1 0
chr14:22770838|22771169 hsa-miR-6128 0 1 0
chr14:22770838|22771169 hsa-miR-8085 1 0 0
chr14:22770838|22771169 hsa-miR-8089 1 1 0
chr14:22770838|22771169 hsa-miR-12128 1 0 0
chr14:22770838|22771169 hsa-miR-370-3p 1 0 0
chr14:22770838|22771169 hsa-miR-4731-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6809-5p 0 1 0
chr14:22770838|22771169 hsa-miR-6861-5p 1 0 0
chr14:22770838|22771169 hsa-miR-7106-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6894-5p 1 0 0
chr14:22770838|22771169 hsa-miR-3692-5p 1 1 0
chr14:22770838|22771169 hsa-miR-6089 1 0 0
chr14:22770838|22771169 hsa-miR-6807-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6746-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4722-5p 0 1 0
chr14:22770838|22771169 hsa-miR-4655-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6827-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6881-5p 1 0 0
chr14:22770838|22771169 hsa-miR-3194-5p 0 1 0
chr14:22770838|22771169 hsa-miR-6821-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6858-3p 0 1 0
chr14:22770838|22771169 hsa-miR-6786-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4640-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6753-5p 0 1 0
chr14:22770838|22771169 hsa-miR-4713-3p 1 0 0
chr14:22770838|22771169 hsa-miR-4743-5p 1 0 0
chr14:22770838|22771169 hsa-miR-3648 1 0 0
chr14:22770838|22771169 hsa-miR-149-3p 1 0 0
chr14:22770838|22771169 hsa-miR-6824-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6802-5p 0 1 0
chr14:22770838|22771169 hsa-miR-4776-5p 1 1 0
chr14:22770838|22771169 hsa-miR-6895-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4708-3p 1 0 0
chr14:22770838|22771169 hsa-miR-1225-5p 1 0 0
chr14:22770838|22771169 hsa-miR-383-3p 1 0 0
chr14:22770838|22771169 hsa-miR-7113-5p 0 1 0
chr14:22770838|22771169 hsa-miR-483-5p 1 0 0
chr14:22770838|22771169 hsa-miR-200b-3p 0 1 0
chr14:22770838|22771169 hsa-miR-1207-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4763-3p 1 0 0
chr14:22770838|22771169 hsa-miR-6812-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6865-5p 0 1 0
chr14:22770838|22771169 hsa-miR-1343-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6754-5p 1 1 0
chr14:22770838|22771169 hsa-miR-6756-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6815-5p 1 0 0
chr14:22770838|22771169 hsa-miR-7107-5p 1 0 0
chr14:22770838|22771169 hsa-miR-1249-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6751-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6774-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6797-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6808-5p 1 1 0
chr14:22770838|22771169 hsa-miR-6879-5p 1 0 0
chr14:22770838|22771169 hsa-miR-7111-5p 1 0 0
chr14:22770838|22771169 hsa-miR-3620-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4728-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6780b-5p 1 0 0
chr14:22770838|22771169 hsa-miR-10396b-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4649-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4685-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4725-3p 1 0 0
chr14:22770838|22771169 hsa-miR-4726-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4749-5p 1 0 0
chr14:22770838|22771169 hsa-miR-6729-5p 1 0 0
chr14:22770838|22771169 hsa-miR-939-5p 1 0 0
chr14:22770838|22771169 hsa-miR-4758-5p 1 0 0
chr14:22770838|22771169 hsa-miR-1910-3p 0 1 0
chr14:22770838|22771169 hsa-miR-6511a-5p 0 1 0
chr14:22770838|22771169 hsa-miR-3198 1 1 0
chr14:22770838|22771169 hsa-miR-6736-5p 1 1 0
chr14:22770838|22771169 hsa-miR-3116 1 0 0
chr14:22770838|22771169 hsa-miR-4700-5p 1 0 0
chr14:22770838|22771169 hsa-miR-10398-3p 1 0 0
chr14:22770838|22771169 hsa-miR-6791-5p 1 0 0
chr14:22770838|22771169 hsa-miR-769-3p 1 0 0
chr14:22770838|22771169 hsa-miR-4676-5p 0 1 0
chr14:22770838|22771169 hsa-miR-4690-3p 0 1 0
chr14:22770838|22771169 hsa-miR-455-3p 0 1 0
chr14:22770838|22771169 hsa-miR-200c-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:22770838|22771169
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MRNVIRMMPLITLPITMHFPTVCNALWAGSKAFCLA
Nucleotide Sequence ATGAGAAATGTCATCAGAATGATGCCCCTGATAACCTTGCCCATAACCATGCATTTCCCCACGGTATGTAATGCCTTATGGGCTGGCTCCAAGGCCTTCTGCCTAGCCTAG
CircID chr14:22770838|22771169
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MTRDTASESLLCVLTQAVFMYWLSSNLFSLVQVSCLRIPAVRTVLKIPQRVVHDLDKLPPREGFLE
Nucleotide Sequence CTGACCAGGGATACAGCTTCTGAGTCCCTTCTCTGTGTTCTCACCCAGGCAGTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAAAATCCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAGGCTTCCTAGAG
CircID chr14:22770838|22771169
ORF Type ORF3
Protein Length 58
Nucleotide Length 177
Protein Sequence MSPFSVFSPRQCLCTGSPPICFPWSKYPVSGFQQYALYLKSPSVLYMTWTNYLHGKAS
Nucleotide Sequence CTGAGTCCCTTCTCTGTGTTCTCACCCAGGCAGTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAAAATCCCCCAGCGTGTTGTACATGACCTGGACAAATTACCTCCACGGGAAGGCTTCCTAG
CircID chr14:22770838|22771169
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MCSHPGSVYVLALLQFVFPGPSILSPDSSSTHCT
Nucleotide Sequence CTGTGTTCTCACCCAGGCAGTGTTTATGTACTGGCTCTCCTCCAATTTGTTTTCCCTGGTCCAAGTATCCTGTCTCCGGATTCCAGCAGTACGCACTGTACTTAA
CircID chr14:22770838|22771169
ORF Type ORF5
Protein Length 61
Nucleotide Length 186
Protein Sequence MSRSCTTRWGILSTVRTAGIRRQDTWTRENKLEESQYINTAWVRTQRRDSEAVSLVSLLGG
Nucleotide Sequence TTGTCCAGGTCATGTACAACACGCTGGGGGATTTTAAGTACAGTGCGTACTGCTGGAATCCGGAGACAGGATACTTGGACCAGGGAAAACAAATTGGAGGAGAGCCAGTACATAAACACTGCCTGGGTGAGAACACAGAGAAGGGACTCAGAAGCTGTATCCCTGGTCAGCTTGCTAGGTGGCTAG
CircID chr14:22770838|22771169
ORF Type ORF6
Protein Length 32
Nucleotide Length 99
Protein Sequence MEPAHKALHTVGKCMVMGKVIRGIILMTFLIH
Nucleotide Sequence TTGGAGCCAGCCCATAAGGCATTACATACCGTGGGGAAATGCATGGTTATGGGCAAGGTTATCAGGGGCATCATTCTGATGACATTTCTCATCCACTGA
CircID chr14:22770838|22771169
ORF Type ORF7
Protein Length 59
Nucleotide Length 180
Protein Sequence MYNTLGDFKYSAYCWNPETGYLDQGKQIGGEPVHKHCLGENTEKGLRSCIPGQLARWLG
Nucleotide Sequence ATGTACAACACGCTGGGGGATTTTAAGTACAGTGCGTACTGCTGGAATCCGGAGACAGGATACTTGGACCAGGGAAAACAAATTGGAGGAGAGCCAGTACATAAACACTGCCTGGGTGAGAACACAGAGAAGGGACTCAGAAGCTGTATCCCTGGTCAGCTTGCTAGGTGGCTAGGCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab