CircRNA Information

General Information
circRNA Basic Information
CircID chr14:22813309|22813429
Strand -
CircType exon
Host Gene ENSG00000155465.17;
Algorism CIRI2;
Sequence CTGCTCCGGCCCTGGGCTGGCCCCATCACCCAAAGGGGAGGTTTCCACCTCAGGCTGGGAGGCCACTTCATACTCAGTGCTGTCAACCATGGTGGAGGAGAGGAAACCCTTCACCAGCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:22813309|22813429 hsa-miR-496 0 0 1
chr14:22813309|22813429 hsa-miR-563 1 0 1
chr14:22813309|22813429 hsa-miR-573 0 0 1
chr14:22813309|22813429 hsa-miR-1238-5p 0 0 1
chr14:22813309|22813429 hsa-miR-1238-3p 0 0 1
chr14:22813309|22813429 hsa-miR-1203 0 0 1
chr14:22813309|22813429 hsa-miR-1262 0 0 1
chr14:22813309|22813429 hsa-miR-138 0 0 1
chr14:22813309|22813429 hsa-miR-663b 1 0 0
chr14:22813309|22813429 hsa-miR-544b 0 1 0
chr14:22813309|22813429 hsa-miR-3196 1 0 0
chr14:22813309|22813429 hsa-miR-3918 0 1 0
chr14:22813309|22813429 hsa-miR-4487 0 1 0
chr14:22813309|22813429 hsa-miR-4526 1 0 0
chr14:22813309|22813429 hsa-miR-3972 1 0 0
chr14:22813309|22813429 hsa-miR-6749-3p 1 0 0
chr14:22813309|22813429 hsa-miR-4700-3p 1 0 0
chr14:22813309|22813429 hsa-miR-671-5p 1 0 0
chr14:22813309|22813429 hsa-miR-1227-5p 0 1 0
chr14:22813309|22813429 hsa-miR-6089 1 0 0
chr14:22813309|22813429 hsa-miR-6744-5p 1 0 0
chr14:22813309|22813429 hsa-miR-6849-3p 0 1 0
chr14:22813309|22813429 hsa-miR-1915-5p 1 0 0
chr14:22813309|22813429 hsa-miR-6845-3p 0 1 0
chr14:22813309|22813429 hsa-miR-877-3p 1 0 0
chr14:22813309|22813429 hsa-miR-6514-5p 0 1 0
chr14:22813309|22813429 hsa-miR-4793-3p 1 0 0
chr14:22813309|22813429 hsa-miR-6786-5p 1 0 0
chr14:22813309|22813429 hsa-miR-1226-5p 1 0 0
chr14:22813309|22813429 hsa-miR-2277-3p 1 0 0
chr14:22813309|22813429 hsa-miR-767-5p 0 1 0
chr14:22813309|22813429 hsa-miR-7111-3p 1 0 0
chr14:22813309|22813429 hsa-miR-6781-5p 0 1 0
chr14:22813309|22813429 hsa-miR-7162-3p 0 1 0
chr14:22813309|22813429 hsa-miR-1910-5p 1 0 0
chr14:22813309|22813429 hsa-miR-758-5p 0 1 0
chr14:22813309|22813429 hsa-miR-92a-3p 1 0 0
chr14:22813309|22813429 hsa-miR-6812-5p 1 0 0
chr14:22813309|22813429 hsa-miR-6756-5p 1 0 0
chr14:22813309|22813429 hsa-miR-6851-5p 1 0 0
chr14:22813309|22813429 hsa-miR-1915-3p 0 1 0
chr14:22813309|22813429 hsa-miR-1237-5p 1 0 0
chr14:22813309|22813429 hsa-miR-4685-5p 0 1 0
chr14:22813309|22813429 hsa-miR-4701-3p 0 1 0
chr14:22813309|22813429 hsa-miR-4726-5p 1 0 0
chr14:22813309|22813429 hsa-miR-6845-5p 0 1 0
chr14:22813309|22813429 hsa-miR-6736-5p 0 1 0
chr14:22813309|22813429 hsa-miR-6762-5p 1 0 0
chr14:22813309|22813429 hsa-miR-6837-5p 0 1 0
chr14:22813309|22813429 hsa-miR-3059-5p 0 1 0
chr14:22813309|22813429 hsa-miR-4691-5p 0 1 0
chr14:22813309|22813429 hsa-miR-6764-5p 0 1 0
chr14:22813309|22813429 hsa-miR-4690-3p 0 1 0
chr14:22813309|22813429 hsa-miR-92b-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:22813309|22813429
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence LLRPWAGPITQRGGFHLRLGGHFILSAVNHGGGEETLHQL
Nucleotide Sequence CTGCTCCGGCCCTGGGCTGGCCCCATCACCCAAAGGGGAGGTTTCCACCTCAGGCTGGGAGGCCACTTCATACTCAGTGCTGTCAACCATGGTGGAGGAGAGGAAACCCTTCACCAGCTT
CircID chr14:22813309|22813429
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MAPSPKGEVSTSGWEATSYSVLSTMVEERKPFTSF
Nucleotide Sequence CTGGCCCCATCACCCAAAGGGGAGGTTTCCACCTCAGGCTGGGAGGCCACTTCATACTCAGTGCTGTCAACCATGGTGGAGGAGAGGAAACCCTTCACCAGCTTC
CircID chr14:22813309|22813429
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MGWPHHPKGRFPPQAGRPLHTQCCQPWWRRGNPSPA
Nucleotide Sequence CTGGGCTGGCCCCATCACCCAAAGGGGAGGTTTCCACCTCAGGCTGGGAGGCCACTTCATACTCAGTGCTGTCAACCATGGTGGAGGAGAGGAAACCCTTCACCAGCT
CircID chr14:22813309|22813429
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MVKGFLSSTMVDSTEYEVASQPEVETSPLGDGASPGPEQ
Nucleotide Sequence CTGGTGAAGGGTTTCCTCTCCTCCACCATGGTTGACAGCACTGAGTATGAAGTGGCCTCCCAGCCTGAGGTGGAAACCTCCCCTTTGGGTGATGGGGCCAGCCCAGGGCCGGAGCAG
CircID chr14:22813309|22813429
ORF Type ORF5
Protein Length 28
Nucleotide Length 84
Protein Sequence MTALSMKWPPSLRWKPPLWVMGPAQGRS
Nucleotide Sequence TTGACAGCACTGAGTATGAAGTGGCCTCCCAGCCTGAGGTGGAAACCTCCCCTTTGGGTGATGGGGCCAGCCCAGGGCCGGAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab