CircRNA Information

General Information
circRNA Basic Information
CircID chr14:22847174|22847334
Strand +
CircType exon
Host Gene ENSG00000157227.11;
Algorism CIRI2;
Sequence TGGTGAGACAGGCTTGAGGGGTGCTGGCACCAGGGAAGCGTGGACCCAGCCTAAGCGAGCCCCAGCTCCTGCCCCTCACTGAGATGGTGAGCAGGCCGGGACAGCGTGGCCAGCCAGGCCCTGTGGCCTCTCGTGAAGCCCCTCATTCCTCGTTTGTGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:22847174|22847334 hsa-miR-588 0 0 1
chr14:22847174|22847334 hsa-miR-708-5p 0 0 1
chr14:22847174|22847334 hsa-miR-708-3p 0 0 1
chr14:22847174|22847334 hsa-miR-1178-5p 0 0 1
chr14:22847174|22847334 hsa-miR-1178-3p 0 0 1
chr14:22847174|22847334 hsa-miR-1229-5p 0 0 1
chr14:22847174|22847334 hsa-miR-1229-3p 0 0 1
chr14:22847174|22847334 hsa-miR-1234-3p 0 0 1
chr14:22847174|22847334 hsa-miR-1202 0 0 1
chr14:22847174|22847334 hsa-miR-1234 0 0 1
chr14:22847174|22847334 hsa-miR-486-3p 0 0 1
chr14:22847174|22847334 hsa-miR-423-5p 1 1 1
chr14:22847174|22847334 hsa-miR-28-5p 0 0 1
chr14:22847174|22847334 hsa-miR-767-3p 0 0 1
chr14:22847174|22847334 hsa-miR-1274a 0 0 1
chr14:22847174|22847334 hsa-miR-220c 0 0 1
chr14:22847174|22847334 hsa-miR-611 1 0 0
chr14:22847174|22847334 hsa-miR-638 1 0 0
chr14:22847174|22847334 hsa-miR-762 1 0 0
chr14:22847174|22847334 hsa-miR-921 0 1 0
chr14:22847174|22847334 hsa-miR-2861 0 1 0
chr14:22847174|22847334 hsa-miR-3131 1 0 0
chr14:22847174|22847334 hsa-miR-4449 0 1 0
chr14:22847174|22847334 hsa-miR-4512 0 1 0
chr14:22847174|22847334 hsa-miR-1587 1 0 0
chr14:22847174|22847334 hsa-miR-3972 0 1 0
chr14:22847174|22847334 hsa-miR-4656 1 0 0
chr14:22847174|22847334 hsa-miR-4688 1 1 0
chr14:22847174|22847334 hsa-miR-4739 1 0 0
chr14:22847174|22847334 hsa-miR-5194 1 0 0
chr14:22847174|22847334 hsa-miR-5787 1 1 0
chr14:22847174|22847334 hsa-miR-6085 1 1 0
chr14:22847174|22847334 hsa-miR-6133 1 0 0
chr14:22847174|22847334 hsa-miR-4433b-3p 1 0 0
chr14:22847174|22847334 hsa-miR-214-5p 0 1 0
chr14:22847174|22847334 hsa-miR-6734-5p 1 1 0
chr14:22847174|22847334 hsa-miR-4433a-3p 1 0 0
chr14:22847174|22847334 hsa-miR-766-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6089 1 0 0
chr14:22847174|22847334 hsa-miR-6757-5p 1 0 0
chr14:22847174|22847334 hsa-miR-3064-5p 0 1 0
chr14:22847174|22847334 hsa-miR-3928-3p 1 0 0
chr14:22847174|22847334 hsa-miR-6842-3p 0 1 0
chr14:22847174|22847334 hsa-miR-6721-5p 1 1 0
chr14:22847174|22847334 hsa-miR-4655-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6716-5p 1 0 0
chr14:22847174|22847334 hsa-miR-185-3p 1 0 0
chr14:22847174|22847334 hsa-miR-1226-5p 1 0 0
chr14:22847174|22847334 hsa-miR-3944-3p 1 0 0
chr14:22847174|22847334 hsa-miR-6771-5p 1 0 0
chr14:22847174|22847334 hsa-miR-149-3p 1 0 0
chr14:22847174|22847334 hsa-miR-3190-5p 0 1 0
chr14:22847174|22847334 hsa-miR-744-5p 1 0 0
chr14:22847174|22847334 hsa-miR-1296-5p 1 0 0
chr14:22847174|22847334 hsa-miR-4717-5p 0 1 0
chr14:22847174|22847334 hsa-miR-4763-3p 1 1 0
chr14:22847174|22847334 hsa-miR-6816-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6775-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6726-5p 1 1 0
chr14:22847174|22847334 hsa-miR-6743-5p 1 1 0
chr14:22847174|22847334 hsa-miR-6756-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6813-5p 1 1 0
chr14:22847174|22847334 hsa-miR-6722-3p 1 0 0
chr14:22847174|22847334 hsa-miR-3620-5p 1 0 0
chr14:22847174|22847334 hsa-miR-4728-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6836-5p 1 0 0
chr14:22847174|22847334 hsa-miR-10396a-5p 1 0 0
chr14:22847174|22847334 hsa-miR-1909-3p 1 1 0
chr14:22847174|22847334 hsa-miR-328-5p 1 1 0
chr14:22847174|22847334 hsa-miR-4726-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6738-5p 1 1 0
chr14:22847174|22847334 hsa-miR-6848-5p 1 0 0
chr14:22847174|22847334 hsa-miR-6885-5p 1 0 0
chr14:22847174|22847334 hsa-miR-939-5p 1 0 0
chr14:22847174|22847334 hsa-miR-1914-3p 1 0 0
chr14:22847174|22847334 hsa-miR-3173-3p 1 0 0
chr14:22847174|22847334 hsa-miR-6891-5p 1 0 0
chr14:22847174|22847334 hsa-miR-3184-5p 1 1 0
chr14:22847174|22847334 hsa-miR-3085-3p 0 1 0
chr14:22847174|22847334 hsa-miR-6824-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:22847174|22847334
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MAPGKRGPSLSEPQLLPLTEMVSRPGQRGQPGPVASREAPHSSFVC
Nucleotide Sequence CTGGCACCAGGGAAGCGTGGACCCAGCCTAAGCGAGCCCCAGCTCCTGCCCCTCACTGAGATGGTGAGCAGGCCGGGACAGCGTGGCCAGCCAGGCCCTGTGGCCTCTCGTGAAGCCCCTCATTCCTCGTTTGTGTGC
CircID chr14:22847174|22847334
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MRGFTRGHRAWLATLSRPAHHLSEGQELGLA
Nucleotide Sequence ATGAGGGGCTTCACGAGAGGCCACAGGGCCTGGCTGGCCACGCTGTCCCGGCCTGCTCACCATCTCAGTGAGGGGCAGGAGCTGGGGCTCGCTTAG
CircID chr14:22847174|22847334
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MLTISVRGRSWGSLRLGPRFPGASTPQACLT
Nucleotide Sequence CTGCTCACCATCTCAGTGAGGGGCAGGAGCTGGGGCTCGCTTAGGCTGGGTCCACGCTTCCCTGGTGCCAGCACCCCTCAAGCCTGTCTCACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab