CircRNA Information

General Information
circRNA Basic Information
CircID chr14:22875901|22876196
Strand +
CircType exon
Host Gene ENSG00000197324.7;
Algorism CIRI2;
Sequence CCACGTCTCATACACGCACTTCTCGTCCCGGCATCGGAAATTGCCAGGCTGGCAATGCCGACAGCGTCTCTCATCTGCTCCATCAGCACAGAAAGTCTGGTAGTTGCAGCGGTCAGCAGGCAGGTAGCAGGCTGTGGCACCAGAGGTGCCAGCAGCCCCACAGGGGAAGTGTCCAGGTGGGCAGCCTGGGCAGTCCTCCTCATCTGTGCCGTCAGCACAGTCCCATGAGCCGTCACAGCGCTGTGCCTCACTGTAGCAGCGCTCACCTAGGCCTTCGCCAGCTCCCAGGCCAGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:22875901|22876196 hsa-miR-221-5p 0 0 1
chr14:22875901|22876196 hsa-miR-221-3p 0 0 1
chr14:22875901|22876196 hsa-miR-222-5p 0 0 1
chr14:22875901|22876196 hsa-miR-222-3p 0 0 1
chr14:22875901|22876196 hsa-miR-370-5p 0 0 1
chr14:22875901|22876196 hsa-miR-370-3p 0 0 1
chr14:22875901|22876196 hsa-miR-596 0 0 1
chr14:22875901|22876196 hsa-miR-619-5p 0 0 1
chr14:22875901|22876196 hsa-miR-619-3p 0 0 1
chr14:22875901|22876196 hsa-miR-661 1 1 1
chr14:22875901|22876196 hsa-miR-891b 0 0 1
chr14:22875901|22876196 hsa-miR-920 0 1 1
chr14:22875901|22876196 hsa-miR-1227-5p 0 0 1
chr14:22875901|22876196 hsa-miR-1227-3p 0 0 1
chr14:22875901|22876196 hsa-miR-1202 0 0 1
chr14:22875901|22876196 hsa-miR-1256 0 0 1
chr14:22875901|22876196 hsa-miR-1288-5p 0 0 1
chr14:22875901|22876196 hsa-miR-1288-3p 0 0 1
chr14:22875901|22876196 hsa-miR-1827 0 0 1
chr14:22875901|22876196 hsa-miR-139-5p 0 0 1
chr14:22875901|22876196 hsa-miR-139-3p 0 0 1
chr14:22875901|22876196 hsa-miR-491-5p 0 0 1
chr14:22875901|22876196 hsa-miR-339-3p 0 0 1
chr14:22875901|22876196 hsa-miR-1224-3p 0 1 1
chr14:22875901|22876196 hsa-miR-331-3p 0 0 1
chr14:22875901|22876196 hsa-miR-628-5p 0 1 1
chr14:22875901|22876196 hsa-miR-1308 0 0 1
chr14:22875901|22876196 hsa-miR-623 1 1 0
chr14:22875901|22876196 hsa-miR-637 1 0 0
chr14:22875901|22876196 hsa-miR-762 1 0 0
chr14:22875901|22876196 hsa-miR-548q 0 1 0
chr14:22875901|22876196 hsa-miR-2861 1 0 0
chr14:22875901|22876196 hsa-miR-3135a 0 1 0
chr14:22875901|22876196 hsa-miR-3169 1 1 0
chr14:22875901|22876196 hsa-miR-3176 1 1 0
chr14:22875901|22876196 hsa-miR-320e 1 0 0
chr14:22875901|22876196 hsa-miR-3197 1 0 0
chr14:22875901|22876196 hsa-miR-4298 1 0 0
chr14:22875901|22876196 hsa-miR-4300 0 1 0
chr14:22875901|22876196 hsa-miR-4281 1 0 0
chr14:22875901|22876196 hsa-miR-4440 1 0 0
chr14:22875901|22876196 hsa-miR-4449 1 0 0
chr14:22875901|22876196 hsa-miR-4487 1 1 0
chr14:22875901|22876196 hsa-miR-4488 1 0 0
chr14:22875901|22876196 hsa-miR-4497 1 0 0
chr14:22875901|22876196 hsa-miR-4498 1 0 0
chr14:22875901|22876196 hsa-miR-4515 1 0 0
chr14:22875901|22876196 hsa-miR-4526 1 0 0
chr14:22875901|22876196 hsa-miR-4534 0 1 0
chr14:22875901|22876196 hsa-miR-4656 1 0 0
chr14:22875901|22876196 hsa-miR-4688 1 0 0
chr14:22875901|22876196 hsa-miR-4721 1 0 0
chr14:22875901|22876196 hsa-miR-5681b 0 1 0
chr14:22875901|22876196 hsa-miR-5787 1 0 0
chr14:22875901|22876196 hsa-miR-6081 1 0 0
chr14:22875901|22876196 hsa-miR-6090 1 0 0
chr14:22875901|22876196 hsa-miR-8052 1 1 0
chr14:22875901|22876196 hsa-miR-8073 1 0 0
chr14:22875901|22876196 hsa-miR-8075 1 1 0
chr14:22875901|22876196 hsa-miR-8082 0 1 0
chr14:22875901|22876196 hsa-miR-8085 1 0 0
chr14:22875901|22876196 hsa-miR-12115 1 0 0
chr14:22875901|22876196 hsa-miR-134-3p 0 1 0
chr14:22875901|22876196 hsa-miR-17-3p 0 1 0
chr14:22875901|22876196 hsa-miR-4433b-3p 1 0 0
chr14:22875901|22876196 hsa-miR-93-3p 0 1 0
chr14:22875901|22876196 hsa-miR-6747-3p 0 1 0
chr14:22875901|22876196 hsa-miR-4726-3p 0 1 0
chr14:22875901|22876196 hsa-miR-4433a-3p 1 0 0
chr14:22875901|22876196 hsa-miR-6799-5p 1 0 0
chr14:22875901|22876196 hsa-miR-3692-5p 0 1 0
chr14:22875901|22876196 hsa-miR-7851-3p 1 0 0
chr14:22875901|22876196 hsa-miR-5187-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6089 1 0 0
chr14:22875901|22876196 hsa-miR-3192-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6741-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6762-3p 0 1 0
chr14:22875901|22876196 hsa-miR-3622b-5p 1 0 0
chr14:22875901|22876196 hsa-miR-512-3p 0 1 0
chr14:22875901|22876196 hsa-miR-4728-3p 1 0 0
chr14:22875901|22876196 hsa-miR-6796-5p 0 1 0
chr14:22875901|22876196 hsa-miR-185-3p 1 1 0
chr14:22875901|22876196 hsa-miR-6829-5p 0 1 0
chr14:22875901|22876196 hsa-miR-6827-5p 1 0 0
chr14:22875901|22876196 hsa-miR-3934-3p 0 1 0
chr14:22875901|22876196 hsa-miR-5088-5p 1 0 0
chr14:22875901|22876196 hsa-miR-1226-5p 1 0 0
chr14:22875901|22876196 hsa-miR-92b-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6749-5p 1 0 0
chr14:22875901|22876196 hsa-miR-4638-3p 0 1 0
chr14:22875901|22876196 hsa-miR-194-3p 1 1 0
chr14:22875901|22876196 hsa-miR-3120-5p 0 1 0
chr14:22875901|22876196 hsa-miR-6782-3p 0 1 0
chr14:22875901|22876196 hsa-miR-2277-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6847-3p 0 1 0
chr14:22875901|22876196 hsa-miR-4712-3p 0 1 0
chr14:22875901|22876196 hsa-miR-499b-5p 0 1 0
chr14:22875901|22876196 hsa-miR-5002-3p 0 1 0
chr14:22875901|22876196 hsa-miR-1537-5p 0 1 0
chr14:22875901|22876196 hsa-miR-6726-5p 1 1 0
chr14:22875901|22876196 hsa-miR-6743-5p 1 0 0
chr14:22875901|22876196 hsa-miR-7107-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6779-5p 1 0 0
chr14:22875901|22876196 hsa-miR-3620-5p 1 0 0
chr14:22875901|22876196 hsa-miR-1237-5p 1 0 0
chr14:22875901|22876196 hsa-miR-4649-5p 1 0 0
chr14:22875901|22876196 hsa-miR-4726-5p 1 0 0
chr14:22875901|22876196 hsa-miR-4745-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6729-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6846-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6848-5p 1 0 0
chr14:22875901|22876196 hsa-miR-6858-5p 0 1 0
chr14:22875901|22876196 hsa-miR-939-5p 1 0 0
chr14:22875901|22876196 hsa-miR-3199 0 1 0
chr14:22875901|22876196 hsa-miR-5591-5p 0 1 0
chr14:22875901|22876196 hsa-miR-6893-3p 0 1 0
chr14:22875901|22876196 hsa-miR-9851-5p 0 1 0
chr14:22875901|22876196 hsa-miR-7157-3p 0 1 0
chr14:22875901|22876196 hsa-miR-3064-3p 0 1 0
chr14:22875901|22876196 hsa-miR-4720-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:22875901|22876196
ORF Type ORF1
Protein Length 59
Nucleotide Length 180
Protein Sequence MAMPTASLICSISTESLVVAAVSRQVAGCGTRGASSPTGEVSRWAAWAVLLICAVSTVP
Nucleotide Sequence CTGGCAATGCCGACAGCGTCTCTCATCTGCTCCATCAGCACAGAAAGTCTGGTAGTTGCAGCGGTCAGCAGGCAGGTAGCAGGCTGTGGCACCAGAGGTGCCAGCAGCCCCACAGGGGAAGTGTCCAGGTGGGCAGCCTGGGCAGTCCTCCTCATCTGTGCCGTCAGCACAGTCCCATGA
CircID chr14:22875901|22876196
ORF Type ORF2
Protein Length 74
Nucleotide Length 222
Protein Sequence MLHQHRKSGSCSGQQAGSRLWHQRCQQPHRGSVQVGSLGSPPHLCRQHSPMSRHSAVPHCSSAHLGLRQLPGQS
Nucleotide Sequence CTGCTCCATCAGCACAGAAAGTCTGGTAGTTGCAGCGGTCAGCAGGCAGGTAGCAGGCTGTGGCACCAGAGGTGCCAGCAGCCCCACAGGGGAAGTGTCCAGGTGGGCAGCCTGGGCAGTCCTCCTCATCTGTGCCGTCAGCACAGTCCCATGAGCCGTCACAGCGCTGTGCCTCACTGTAGCAGCGCTCACCTAGGCCTTCGCCAGCTCCCAGGCCAGAGC
CircID chr14:22875901|22876196
ORF Type ORF3
Protein Length 71
Nucleotide Length 213
Protein Sequence MTAQMRRTAQAAHLDTSPVGLLAPLVPQPATCLLTAATTRLSVLMEQMRDAVGIASLAISDAGTRSACMRR
Nucleotide Sequence CTGACGGCACAGATGAGGAGGACTGCCCAGGCTGCCCACCTGGACACTTCCCCTGTGGGGCTGCTGGCACCTCTGGTGCCACAGCCTGCTACCTGCCTGCTGACCGCTGCAACTACCAGACTTTCTGTGCTGATGGAGCAGATGAGAGACGCTGTCGGCATTGCCAGCCTGGCAATTTCCGATGCCGGGACGAGAAGTGCGTGTATGAGACGT
CircID chr14:22875901|22876196
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MPRLPTWTLPLWGCWHLWCHSLLPAC
Nucleotide Sequence CTGCCCAGGCTGCCCACCTGGACACTTCCCCTGTGGGGCTGCTGGCACCTCTGGTGCCACAGCCTGCTACCTGCCTGCTGA
CircID chr14:22875901|22876196
ORF Type ORF5
Protein Length 96
Nucleotide Length 288
Protein Sequence MGAGEGLGERCYSEAQRCDGSWDCADGTDEEDCPGCPPGHFPCGAAGTSGATACYLPADRCNYQTFCADGADERRCRHCQPGNFRCRDEKCVYETW
Nucleotide Sequence CTGGGAGCTGGCGAAGGCCTAGGTGAGCGCTGCTACAGTGAGGCACAGCGCTGTGACGGCTCATGGGACTGTGCTGACGGCACAGATGAGGAGGACTGCCCAGGCTGCCCACCTGGACACTTCCCCTGTGGGGCTGCTGGCACCTCTGGTGCCACAGCCTGCTACCTGCCTGCTGACCGCTGCAACTACCAGACTTTCTGTGCTGATGGAGCAGATGAGAGACGCTGTCGGCATTGCCAGCCTGGCAATTTCCGATGCCGGGACGAGAAGTGCGTGTATGAGACGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab