CircRNA Information

General Information
circRNA Basic Information
CircID chr14:22876771|22877012
Strand +
CircType exon
Host Gene ENSG00000197324.7;
Algorism CIRI2;
Sequence CTGGGCCACCTCCTGGAGTCATATCCTGGCGTAAGATCTGTAGCAGAGAACGCAGGTTGCCCAGCACTGAGTTCTGCAAGGAAATGAGGAGGCCTCAGAGTCAGAGGGCCAAAGGCTGAATGAAGGAGGGTACAGGGGCGGGGCCACAGCAGAACTGGGACCAGGAGGTGCTAGGGTTGTGGGGAGTGACTTACATCATTAGGATTCTCTGTAGGAAAGTCTTCTACAGGTGGGATGGCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:22876771|22877012 hsa-miR-29a-5p 0 0 1
chr14:22876771|22877012 hsa-miR-29a-3p 0 0 1
chr14:22876771|22877012 hsa-miR-148a-5p 0 0 1
chr14:22876771|22877012 hsa-miR-148a-3p 0 0 1
chr14:22876771|22877012 hsa-miR-205-5p 0 0 1
chr14:22876771|22877012 hsa-miR-205-3p 0 0 1
chr14:22876771|22877012 hsa-miR-221-5p 0 0 1
chr14:22876771|22877012 hsa-miR-221-3p 0 0 1
chr14:22876771|22877012 hsa-miR-222-5p 0 0 1
chr14:22876771|22877012 hsa-miR-222-3p 0 0 1
chr14:22876771|22877012 hsa-miR-224-5p 0 0 1
chr14:22876771|22877012 hsa-miR-224-3p 0 0 1
chr14:22876771|22877012 hsa-miR-152-5p 0 0 1
chr14:22876771|22877012 hsa-miR-152-3p 0 0 1
chr14:22876771|22877012 hsa-miR-29c-5p 0 0 1
chr14:22876771|22877012 hsa-miR-29c-3p 0 0 1
chr14:22876771|22877012 hsa-miR-328-5p 0 0 1
chr14:22876771|22877012 hsa-miR-328-3p 0 0 1
chr14:22876771|22877012 hsa-miR-148b-5p 0 0 1
chr14:22876771|22877012 hsa-miR-148b-3p 0 0 1
chr14:22876771|22877012 hsa-miR-345-5p 0 0 1
chr14:22876771|22877012 hsa-miR-345-3p 0 0 1
chr14:22876771|22877012 hsa-miR-384 0 0 1
chr14:22876771|22877012 hsa-miR-612 0 0 1
chr14:22876771|22877012 hsa-miR-668-5p 0 0 1
chr14:22876771|22877012 hsa-miR-668-3p 0 0 1
chr14:22876771|22877012 hsa-miR-1298-5p 0 0 1
chr14:22876771|22877012 hsa-miR-1298-3p 0 0 1
chr14:22876771|22877012 hsa-miR-298 0 0 1
chr14:22876771|22877012 hsa-miR-665 0 0 1
chr14:22876771|22877012 hsa-miR-663b 1 0 1
chr14:22876771|22877012 hsa-miR-1291 1 0 1
chr14:22876771|22877012 hsa-miR-486-5p 0 0 1
chr14:22876771|22877012 hsa-miR-512-3p 0 0 1
chr14:22876771|22877012 hsa-miR-508-5p 0 0 1
chr14:22876771|22877012 hsa-miR-1224-3p 1 0 1
chr14:22876771|22877012 hsa-miR-502-5p 0 0 1
chr14:22876771|22877012 hsa-miR-483-3p 0 0 1
chr14:22876771|22877012 hsa-miR-1260 0 0 1
chr14:22876771|22877012 hsa-miR-1280 0 0 1
chr14:22876771|22877012 hsa-miR-1285 0 0 1
chr14:22876771|22877012 hsa-miR-29b 0 0 1
chr14:22876771|22877012 hsa-miR-133b 1 0 0
chr14:22876771|22877012 hsa-miR-1825 1 0 0
chr14:22876771|22877012 hsa-miR-1913 1 0 0
chr14:22876771|22877012 hsa-miR-4286 1 0 0
chr14:22876771|22877012 hsa-miR-4292 1 0 0
chr14:22876771|22877012 hsa-miR-4642 1 0 0
chr14:22876771|22877012 hsa-miR-6749-3p 1 0 0
chr14:22876771|22877012 hsa-miR-149-5p 1 0 0
chr14:22876771|22877012 hsa-miR-210-5p 1 0 0
chr14:22876771|22877012 hsa-miR-3189-5p 1 0 0
chr14:22876771|22877012 hsa-miR-5006-5p 1 0 0
chr14:22876771|22877012 hsa-miR-6788-3p 1 0 0
chr14:22876771|22877012 hsa-miR-4763-5p 1 0 0
chr14:22876771|22877012 hsa-miR-7108-3p 1 0 0
chr14:22876771|22877012 hsa-miR-1247-5p 1 0 0
chr14:22876771|22877012 hsa-miR-4707-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6803-3p 1 0 0
chr14:22876771|22877012 hsa-miR-7161-3p 1 0 0
chr14:22876771|22877012 hsa-miR-146b-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6785-3p 1 0 0
chr14:22876771|22877012 hsa-miR-4758-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6752-3p 1 0 0
chr14:22876771|22877012 hsa-miR-1914-5p 1 0 0
chr14:22876771|22877012 hsa-miR-6886-3p 1 0 0
chr14:22876771|22877012 hsa-miR-5088-3p 1 0 0
chr14:22876771|22877012 hsa-miR-4749-3p 1 0 0
chr14:22876771|22877012 hsa-miR-4649-3p 1 0 0
chr14:22876771|22877012 hsa-miR-1292-3p 1 0 0
chr14:22876771|22877012 hsa-miR-331-3p 1 0 0
chr14:22876771|22877012 hsa-miR-4433a-5p 1 0 0
chr14:22876771|22877012 hsa-miR-3173-5p 1 0 0
chr14:22876771|22877012 hsa-miR-1249-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6780b-3p 1 0 0
chr14:22876771|22877012 hsa-miR-3162-3p 1 0 0
chr14:22876771|22877012 hsa-miR-133a-3p 1 0 0
chr14:22876771|22877012 hsa-miR-3187-5p 1 0 0
chr14:22876771|22877012 hsa-miR-10396a-3p 1 0 0
chr14:22876771|22877012 hsa-miR-10396b-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6799-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6877-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6756-3p 1 0 0
chr14:22876771|22877012 hsa-miR-10401-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6801-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6810-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6775-3p 1 0 0
chr14:22876771|22877012 hsa-miR-10392-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6819-3p 1 0 0
chr14:22876771|22877012 hsa-miR-6744-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:22876771|22877012
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LGHLLESYPGVRSVAENAGCPALSSARK
Nucleotide Sequence CTGGGCCACCTCCTGGAGTCATATCCTGGCGTAAGATCTGTAGCAGAGAACGCAGGTTGCCCAGCACTGAGTTCTGCAAGGAAATGA
CircID chr14:22876771|22877012
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MQGNEEASESEGQRLNEGGYRGGATAELGPGGARVVGSDLHH
Nucleotide Sequence CTGCAAGGAAATGAGGAGGCCTCAGAGTCAGAGGGCCAAAGGCTGAATGAAGGAGGGTACAGGGGCGGGGCCACAGCAGAACTGGGACCAGGAGGTGCTAGGGTTGTGGGGAGTGACTTACATCATTAG
CircID chr14:22876771|22877012
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MKEGTGAGPQQNWDQEVLGLWGVTYIIRILCRKVFYRWDGT
Nucleotide Sequence ATGAAGGAGGGTACAGGGGCGGGGCCACAGCAGAACTGGGACCAGGAGGTGCTAGGGTTGTGGGGAGTGACTTACATCATTAGGATTCTCTGTAGGAAAGTCTTCTACAGGTGGGATGGCACC
CircID chr14:22876771|22877012
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MVPVLLWPRPCTLLHSAFGPLTLRPPHFLAELSAGQPAFSATDLTPGYDSRRWP
Nucleotide Sequence CTGGTCCCAGTTCTGCTGTGGCCCCGCCCCTGTACCCTCCTTCATTCAGCCTTTGGCCCTCTGACTCTGAGGCCTCCTCATTTCCTTGCAGAACTCAGTGCTGGGCAACCTGCGTTCTCTGCTACAGATCTTACGCCAGGATATGACTCCAGGAGGTGGCCC
CircID chr14:22876771|22877012
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MQNSVLGNLRSLLQILRQDMTPGGGP
Nucleotide Sequence TTGCAGAACTCAGTGCTGGGCAACCTGCGTTCTCTGCTACAGATCTTACGCCAGGATATGACTCCAGGAGGTGGCCCA
CircID chr14:22876771|22877012
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MYPPSFSLWPSDSEASSFPCRTQCWATCVLCYRSYARI
Nucleotide Sequence CTGTACCCTCCTTCATTCAGCCTTTGGCCCTCTGACTCTGAGGCCTCCTCATTTCCTTGCAGAACTCAGTGCTGGGCAACCTGCGTTCTCTGCTACAGATCTTACGCCAGGATATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab