CircRNA Information

General Information
circRNA Basic Information
CircID chr14:22900917|22901085
Strand -
CircType exon
Host Gene ENSG00000100461.16;
Algorism CIRI2;
Sequence ACAGGAAGTGGTAGAGTAGCAGCCTCCCTCCATCCTCCTACCTCGGGCCAAAGGGAGGAAATGGGAGGAAGGACAAGTATACAAAGGAAGATGGAAGATACTGGAAAGGCATACTCCACCTTTTACTAAATTCCTGAAAGCCCCTAAATGCCTCACAGGACAGATCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:22900917|22901085 hsa-let-7b-5p 0 0 1
chr14:22900917|22901085 hsa-let-7b-3p 0 0 1
chr14:22900917|22901085 hsa-let-7c-5p 0 0 1
chr14:22900917|22901085 hsa-let-7c-3p 0 0 1
chr14:22900917|22901085 hsa-let-7d-5p 0 0 1
chr14:22900917|22901085 hsa-let-7d-3p 0 0 1
chr14:22900917|22901085 hsa-let-7e-5p 0 0 1
chr14:22900917|22901085 hsa-let-7e-3p 0 0 1
chr14:22900917|22901085 hsa-miR-98-5p 0 0 1
chr14:22900917|22901085 hsa-miR-98-3p 0 0 1
chr14:22900917|22901085 hsa-miR-204-5p 0 0 1
chr14:22900917|22901085 hsa-miR-204-3p 0 0 1
chr14:22900917|22901085 hsa-miR-211-5p 0 0 1
chr14:22900917|22901085 hsa-miR-211-3p 0 0 1
chr14:22900917|22901085 hsa-let-7g-5p 0 0 1
chr14:22900917|22901085 hsa-let-7g-3p 0 0 1
chr14:22900917|22901085 hsa-let-7i-5p 0 0 1
chr14:22900917|22901085 hsa-let-7i-3p 0 0 1
chr14:22900917|22901085 hsa-miR-328-5p 0 0 1
chr14:22900917|22901085 hsa-miR-328-3p 0 0 1
chr14:22900917|22901085 hsa-miR-568 0 0 1
chr14:22900917|22901085 hsa-miR-873-5p 0 0 1
chr14:22900917|22901085 hsa-miR-873-3p 0 0 1
chr14:22900917|22901085 hsa-miR-1238-5p 0 0 1
chr14:22900917|22901085 hsa-miR-1238-3p 0 0 1
chr14:22900917|22901085 hsa-miR-1294 0 0 1
chr14:22900917|22901085 hsa-miR-1321 0 0 1
chr14:22900917|22901085 hsa-miR-1827 0 0 1
chr14:22900917|22901085 hsa-miR-145-5p 0 0 1
chr14:22900917|22901085 hsa-miR-770-5p 0 0 1
chr14:22900917|22901085 hsa-miR-485-5p 0 0 1
chr14:22900917|22901085 hsa-miR-532-5p 0 0 1
chr14:22900917|22901085 hsa-let-7a 0 0 1
chr14:22900917|22901085 hsa-let-7f 0 0 1
chr14:22900917|22901085 hsa-miR-1245 0 0 1
chr14:22900917|22901085 hsa-miR-4458 0 1 0
chr14:22900917|22901085 hsa-miR-2392 0 1 0
chr14:22900917|22901085 hsa-miR-4534 0 1 0
chr14:22900917|22901085 hsa-miR-3975 1 0 0
chr14:22900917|22901085 hsa-miR-4739 0 1 0
chr14:22900917|22901085 hsa-miR-4741 1 0 0
chr14:22900917|22901085 hsa-miR-6133 0 1 0
chr14:22900917|22901085 hsa-miR-6134 0 1 0
chr14:22900917|22901085 hsa-miR-7974 1 0 0
chr14:22900917|22901085 hsa-miR-8079 0 1 0
chr14:22900917|22901085 hsa-miR-8082 0 1 0
chr14:22900917|22901085 hsa-miR-12114 0 1 0
chr14:22900917|22901085 hsa-miR-6749-3p 1 1 0
chr14:22900917|22901085 hsa-miR-6765-5p 1 0 0
chr14:22900917|22901085 hsa-miR-6894-5p 0 1 0
chr14:22900917|22901085 hsa-miR-6730-5p 1 0 0
chr14:22900917|22901085 hsa-miR-6875-3p 1 0 0
chr14:22900917|22901085 hsa-miR-6762-3p 0 1 0
chr14:22900917|22901085 hsa-miR-3605-5p 0 1 0
chr14:22900917|22901085 hsa-miR-6786-5p 1 0 0
chr14:22900917|22901085 hsa-miR-7109-5p 1 0 0
chr14:22900917|22901085 hsa-miR-3667-3p 0 1 0
chr14:22900917|22901085 hsa-miR-7111-3p 1 0 0
chr14:22900917|22901085 hsa-miR-6789-5p 0 1 0
chr14:22900917|22901085 hsa-let-7a-5p 0 1 0
chr14:22900917|22901085 hsa-miR-5584-3p 1 0 0
chr14:22900917|22901085 hsa-miR-6778-5p 0 1 0
chr14:22900917|22901085 hsa-miR-6775-5p 1 0 0
chr14:22900917|22901085 hsa-miR-1249-5p 1 1 0
chr14:22900917|22901085 hsa-miR-6797-5p 0 1 0
chr14:22900917|22901085 hsa-miR-4685-3p 0 1 0
chr14:22900917|22901085 hsa-miR-6848-5p 1 0 0
chr14:22900917|22901085 hsa-miR-6885-5p 1 0 0
chr14:22900917|22901085 hsa-miR-939-5p 1 0 0
chr14:22900917|22901085 hsa-miR-6753-3p 1 0 0
chr14:22900917|22901085 hsa-miR-4756-5p 1 1 0
chr14:22900917|22901085 hsa-miR-4769-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:22900917|22901085
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MSCEAFRGFQEFSKRWSMPFQYLPSSFVYLSFLPFPPFGPR
Nucleotide Sequence CTGTCCTGTGAGGCATTTAGGGGCTTTCAGGAATTTAGTAAAAGGTGGAGTATGCCTTTCCAGTATCTTCCATCTTCCTTTGTATACTTGTCCTTCCTCCCATTTCCTCCCTTTGGCCCGAGGTAG
CircID chr14:22900917|22901085
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MYTCPSSHFLPLARGRRMEGGCYSTTSC
Nucleotide Sequence TTGTATACTTGTCCTTCCTCCCATTTCCTCCCTTTGGCCCGAGGTAGGAGGATGGAGGGAGGCTGCTACTCTACCACTTCCTGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab