CircRNA Information

General Information
circRNA Basic Information
CircID chr14:23627293|23627391
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGACTACCTACTGTAAACACTTCCCCCATCAAGAGTTCATCCAAAACTCCCAATTCTTTGGGGAGAATGGACAAAGATCAGTCTTTTATAGCTACCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:23627293|23627391 hsa-let-7b-5p 0 0 1
chr14:23627293|23627391 hsa-let-7b-3p 0 0 1
chr14:23627293|23627391 hsa-let-7c-5p 0 0 1
chr14:23627293|23627391 hsa-let-7c-3p 0 0 1
chr14:23627293|23627391 hsa-let-7d-5p 0 0 1
chr14:23627293|23627391 hsa-let-7d-3p 0 0 1
chr14:23627293|23627391 hsa-let-7e-5p 0 0 1
chr14:23627293|23627391 hsa-let-7e-3p 0 0 1
chr14:23627293|23627391 hsa-miR-98-5p 0 0 1
chr14:23627293|23627391 hsa-miR-98-3p 0 0 1
chr14:23627293|23627391 hsa-let-7g-5p 0 0 1
chr14:23627293|23627391 hsa-let-7g-3p 0 0 1
chr14:23627293|23627391 hsa-let-7i-5p 0 0 1
chr14:23627293|23627391 hsa-let-7i-3p 0 0 1
chr14:23627293|23627391 hsa-miR-144-5p 0 0 1
chr14:23627293|23627391 hsa-miR-144-3p 0 0 1
chr14:23627293|23627391 hsa-miR-186-5p 0 0 1
chr14:23627293|23627391 hsa-miR-186-3p 0 0 1
chr14:23627293|23627391 hsa-miR-196b-5p 0 0 1
chr14:23627293|23627391 hsa-miR-196b-3p 0 0 1
chr14:23627293|23627391 hsa-miR-625-5p 0 0 1
chr14:23627293|23627391 hsa-miR-625-3p 0 0 1
chr14:23627293|23627391 hsa-miR-1255a 0 0 1
chr14:23627293|23627391 hsa-miR-1275 0 0 1
chr14:23627293|23627391 hsa-miR-582-5p 0 0 1
chr14:23627293|23627391 hsa-miR-1255b 0 0 1
chr14:23627293|23627391 hsa-let-7a 0 0 1
chr14:23627293|23627391 hsa-let-7f 0 0 1
chr14:23627293|23627391 hsa-miR-196a 0 0 1
chr14:23627293|23627391 hsa-miR-101 0 0 1
chr14:23627293|23627391 hsa-miR-4458 0 1 0
chr14:23627293|23627391 hsa-miR-4525 1 0 0
chr14:23627293|23627391 hsa-miR-5698 1 0 0
chr14:23627293|23627391 hsa-miR-6825-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6880-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6890-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6871-5p 1 0 0
chr14:23627293|23627391 hsa-miR-30b-3p 1 0 0
chr14:23627293|23627391 hsa-miR-3162-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6812-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6752-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6756-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6803-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6751-5p 1 0 0
chr14:23627293|23627391 hsa-miR-7111-5p 1 0 0
chr14:23627293|23627391 hsa-miR-6780b-5p 0 1 0
chr14:23627293|23627391 hsa-miR-4649-5p 1 0 0
chr14:23627293|23627391 hsa-miR-4725-3p 1 0 0
chr14:23627293|23627391 hsa-miR-6777-5p 1 0 0
chr14:23627293|23627391 hsa-miR-4665-5p 0 1 0
chr14:23627293|23627391 hsa-miR-4716-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:23627293|23627391
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence LTTYCKHFPHQEFIQNSQFFGENGQRSVFYSYL
Nucleotide Sequence CTGACTACCTACTGTAAACACTTCCCCCATCAAGAGTTCATCCAAAACTCCCAATTCTTTGGGGAGAATGGACAAAGATCAGTCTTTTATAGCTACCTC

CircID chr14:23627293|23627391
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MSILPKELGVLDELLMGEVFTVGSQ
Nucleotide Sequence TTGTCCATTCTCCCCAAAGAATTGGGAGTTTTGGATGAACTCTTGATGGGGGAAGTGTTTACAGTAGGTAGTCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites