CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24139545|24139650
Strand -
CircType exon
Host Gene ENSG00000100908.12;
Algorism CIRI2;
Sequence CATAATAAGTACTGCATCAGGGAAGAATTCTGCAATTCGCCCAGCAATTTTCAAGGCCAGGGGCCCAGGGCTGTGTAGAGGGAAGATCAGAGGAGTGAGGAGCCAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24139545|24139650 hsa-miR-298 0 0 1
chr14:24139545|24139650 hsa-miR-302f 0 0 1
chr14:24139545|24139650 hsa-miR-296-5p 1 0 1
chr14:24139545|24139650 hsa-miR-331-3p 1 0 1
chr14:24139545|24139650 hsa-miR-125a-5p 0 0 1
chr14:24139545|24139650 hsa-miR-483-3p 1 1 1
chr14:24139545|24139650 hsa-miR-1274a 0 0 1
chr14:24139545|24139650 hsa-miR-125b 0 0 1
chr14:24139545|24139650 hsa-miR-642 0 0 1
chr14:24139545|24139650 hsa-miR-661 0 1 0
chr14:24139545|24139650 hsa-miR-1262 0 1 0
chr14:24139545|24139650 hsa-miR-1284 0 1 0
chr14:24139545|24139650 hsa-miR-4268 1 1 0
chr14:24139545|24139650 hsa-miR-4292 1 1 0
chr14:24139545|24139650 hsa-miR-3651 1 0 0
chr14:24139545|24139650 hsa-miR-4448 1 0 0
chr14:24139545|24139650 hsa-miR-6860 1 0 0
chr14:24139545|24139650 hsa-miR-141-5p 0 1 0
chr14:24139545|24139650 hsa-miR-149-5p 1 0 0
chr14:24139545|24139650 hsa-miR-6881-3p 1 0 0
chr14:24139545|24139650 hsa-miR-218-1-3p 1 0 0
chr14:24139545|24139650 hsa-miR-1225-3p 1 0 0
chr14:24139545|24139650 hsa-miR-23b-5p 1 0 0
chr14:24139545|24139650 hsa-miR-874-3p 1 0 0
chr14:24139545|24139650 hsa-miR-5589-5p 1 0 0
chr14:24139545|24139650 hsa-miR-7110-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6845-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6829-5p 1 0 0
chr14:24139545|24139650 hsa-miR-6735-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6815-3p 1 0 0
chr14:24139545|24139650 hsa-miR-615-5p 1 0 0
chr14:24139545|24139650 hsa-miR-939-3p 1 1 0
chr14:24139545|24139650 hsa-miR-3667-3p 1 0 0
chr14:24139545|24139650 hsa-miR-7111-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6780a-3p 0 1 0
chr14:24139545|24139650 hsa-miR-378a-5p 1 0 0
chr14:24139545|24139650 hsa-miR-345-5p 1 0 0
chr14:24139545|24139650 hsa-miR-501-5p 1 0 0
chr14:24139545|24139650 hsa-miR-6856-3p 0 1 0
chr14:24139545|24139650 hsa-miR-937-3p 1 0 0
chr14:24139545|24139650 hsa-miR-3192-3p 1 1 0
chr14:24139545|24139650 hsa-miR-6779-3p 0 1 0
chr14:24139545|24139650 hsa-miR-6812-3p 1 0 0
chr14:24139545|24139650 hsa-miR-4685-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6729-5p 1 0 0
chr14:24139545|24139650 hsa-miR-10396a-3p 1 0 0
chr14:24139545|24139650 hsa-miR-10396b-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6724-5p 1 0 0
chr14:24139545|24139650 hsa-miR-10398-5p 1 0 0
chr14:24139545|24139650 hsa-miR-2682-3p 1 0 0
chr14:24139545|24139650 hsa-miR-6791-5p 1 0 0
chr14:24139545|24139650 hsa-miR-10400-3p 1 0 0
chr14:24139545|24139650 hsa-miR-3059-5p 1 0 0
chr14:24139545|24139650 hsa-miR-330-5p 0 1 0
chr14:24139545|24139650 hsa-miR-6824-3p 1 0 0
chr14:24139545|24139650 hsa-miR-3922-3p 0 1 0
chr14:24139545|24139650 hsa-miR-6764-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:24139545|24139650
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MHQGRILQFAQQFSRPGAQGCVEGRSEE
Nucleotide Sequence CTGCATCAGGGAAGAATTCTGCAATTCGCCCAGCAATTTTCAAGGCCAGGGGCCCAGGGCTGTGTAGAGGGAAGATCAGAGGAGTGA

CircID chr14:24139545|24139650
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence LAPHSSDLPSTQPWAPGLENCWANCRILP
Nucleotide Sequence TTGGCTCCTCACTCCTCTGATCTTCCCTCTACACAGCCCTGGGCCCCTGGCCTTGAAAATTGCTGGGCGAATTGCAGAATTCTTCCCTGA

CircID chr14:24139545|24139650
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MIFPLHSPGPLALKIAGRIAEFFPDAVLIM
Nucleotide Sequence CTGATCTTCCCTCTACACAGCCCTGGGCCCCTGGCCTTGAAAATTGCTGGGCGAATTGCAGAATTCTTCCCTGATGCAGTACTTATTATG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites