CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24148328|24148689
Strand +
CircType exon
Host Gene ENSG00000092098.15;
Algorism CIRI2;
Sequence CTTGTCTTCCAACAGCTGCTCCAGTGCCTGCTGTCTTGGATGAGTATTCTGCAATAATACAGATAAAAACGGTTTCCAGCTAGACCCCTAGAACAAAGCCCTCCCTCTAAGCCCTGGTCCCTTAACATTCACAGAAGGAAAATCAGTACCCGGAGCTCCCAGAATGCTGAACTATGCCCATAGTTCAGCAGCACGGGGGTCCTCAAACTTACTTGAGTTAGGCTGGGCTCCCCAGCCCTGGTGCATAAGTCCATCAAGACTAGAGGAGCATCTCACCTGCAATAGCAGGCTGAGCTCTGTCCGAAGCAGCAGTACTTCCAGTGTGACTGTAGCAACCTGGTGCTCATCTGGCTCCTCCTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24148328|24148689 hsa-miR-25-5p 0 0 1
chr14:24148328|24148689 hsa-miR-25-3p 0 0 1
chr14:24148328|24148689 hsa-miR-26b-5p 0 0 1
chr14:24148328|24148689 hsa-miR-26b-3p 0 0 1
chr14:24148328|24148689 hsa-miR-29a-5p 0 0 1
chr14:24148328|24148689 hsa-miR-29a-3p 0 0 1
chr14:24148328|24148689 hsa-miR-32-5p 0 0 1
chr14:24148328|24148689 hsa-miR-32-3p 0 0 1
chr14:24148328|24148689 hsa-miR-214-5p 0 0 1
chr14:24148328|24148689 hsa-miR-214-3p 0 0 1
chr14:24148328|24148689 hsa-miR-221-5p 0 0 1
chr14:24148328|24148689 hsa-miR-221-3p 0 0 1
chr14:24148328|24148689 hsa-miR-222-5p 0 0 1
chr14:24148328|24148689 hsa-miR-222-3p 0 0 1
chr14:24148328|24148689 hsa-miR-137-5p 0 0 1
chr14:24148328|24148689 hsa-miR-137-3p 0 0 1
chr14:24148328|24148689 hsa-miR-143-5p 0 0 1
chr14:24148328|24148689 hsa-miR-143-3p 0 0 1
chr14:24148328|24148689 hsa-miR-29c-5p 0 0 1
chr14:24148328|24148689 hsa-miR-29c-3p 0 0 1
chr14:24148328|24148689 hsa-miR-363-5p 0 0 1
chr14:24148328|24148689 hsa-miR-363-3p 0 0 1
chr14:24148328|24148689 hsa-miR-367-5p 0 0 1
chr14:24148328|24148689 hsa-miR-367-3p 0 0 1
chr14:24148328|24148689 hsa-miR-375-5p 0 0 1
chr14:24148328|24148689 hsa-miR-375-3p 0 0 1
chr14:24148328|24148689 hsa-miR-554 0 0 1
chr14:24148328|24148689 hsa-miR-92b-5p 0 0 1
chr14:24148328|24148689 hsa-miR-92b-3p 0 0 1
chr14:24148328|24148689 hsa-miR-596 0 0 1
chr14:24148328|24148689 hsa-miR-601 0 0 1
chr14:24148328|24148689 hsa-miR-646 0 0 1
chr14:24148328|24148689 hsa-miR-657 0 0 1
chr14:24148328|24148689 hsa-miR-765 0 0 1
chr14:24148328|24148689 hsa-miR-298 0 0 1
chr14:24148328|24148689 hsa-miR-877-5p 0 0 1
chr14:24148328|24148689 hsa-miR-877-3p 0 0 1
chr14:24148328|24148689 hsa-miR-920 0 1 1
chr14:24148328|24148689 hsa-miR-939-5p 0 0 1
chr14:24148328|24148689 hsa-miR-939-3p 0 0 1
chr14:24148328|24148689 hsa-miR-1179 0 0 1
chr14:24148328|24148689 hsa-miR-1237-5p 0 0 1
chr14:24148328|24148689 hsa-miR-1237-3p 0 0 1
chr14:24148328|24148689 hsa-miR-1297 0 0 1
chr14:24148328|24148689 hsa-miR-1304-5p 0 0 1
chr14:24148328|24148689 hsa-miR-1304-3p 0 0 1
chr14:24148328|24148689 hsa-miR-1248 0 0 1
chr14:24148328|24148689 hsa-miR-1257 0 0 1
chr14:24148328|24148689 hsa-miR-1278 0 0 1
chr14:24148328|24148689 hsa-miR-1321 0 0 1
chr14:24148328|24148689 hsa-miR-139-5p 0 0 1
chr14:24148328|24148689 hsa-miR-125a-3p 0 1 1
chr14:24148328|24148689 hsa-miR-1224-5p 0 0 1
chr14:24148328|24148689 hsa-miR-767-5p 0 0 1
chr14:24148328|24148689 hsa-miR-875-3p 0 0 1
chr14:24148328|24148689 hsa-miR-502-3p 0 1 1
chr14:24148328|24148689 hsa-miR-501-3p 0 1 1
chr14:24148328|24148689 hsa-miR-491-3p 0 0 1
chr14:24148328|24148689 hsa-miR-7 0 0 1
chr14:24148328|24148689 hsa-miR-26a 0 0 1
chr14:24148328|24148689 hsa-miR-29b 0 0 1
chr14:24148328|24148689 hsa-miR-92a 0 0 1
chr14:24148328|24148689 hsa-miR-451 0 0 1
chr14:24148328|24148689 hsa-miR-603 0 1 0
chr14:24148328|24148689 hsa-miR-637 1 1 0
chr14:24148328|24148689 hsa-miR-762 0 1 0
chr14:24148328|24148689 hsa-miR-1286 1 0 0
chr14:24148328|24148689 hsa-miR-1268a 1 0 0
chr14:24148328|24148689 hsa-miR-2861 1 0 0
chr14:24148328|24148689 hsa-miR-548v 0 1 0
chr14:24148328|24148689 hsa-miR-4326 1 0 0
chr14:24148328|24148689 hsa-miR-4268 0 1 0
chr14:24148328|24148689 hsa-miR-3659 1 0 0
chr14:24148328|24148689 hsa-miR-3665 0 1 0
chr14:24148328|24148689 hsa-miR-3907 1 0 0
chr14:24148328|24148689 hsa-miR-3945 1 1 0
chr14:24148328|24148689 hsa-miR-1268b 1 0 0
chr14:24148328|24148689 hsa-miR-4448 1 0 0
chr14:24148328|24148689 hsa-miR-4465 0 1 0
chr14:24148328|24148689 hsa-miR-4475 0 1 0
chr14:24148328|24148689 hsa-miR-4498 0 1 0
chr14:24148328|24148689 hsa-miR-4534 1 0 0
chr14:24148328|24148689 hsa-miR-4539 0 1 0
chr14:24148328|24148689 hsa-miR-4656 1 0 0
chr14:24148328|24148689 hsa-miR-4739 1 0 0
chr14:24148328|24148689 hsa-miR-4751 0 1 0
chr14:24148328|24148689 hsa-miR-5787 0 1 0
chr14:24148328|24148689 hsa-miR-6081 0 1 0
chr14:24148328|24148689 hsa-miR-6090 1 0 0
chr14:24148328|24148689 hsa-miR-6130 0 1 0
chr14:24148328|24148689 hsa-miR-6132 1 1 0
chr14:24148328|24148689 hsa-miR-6133 1 1 0
chr14:24148328|24148689 hsa-miR-8089 1 0 0
chr14:24148328|24148689 hsa-miR-12113 0 1 0
chr14:24148328|24148689 hsa-miR-93-3p 0 1 0
chr14:24148328|24148689 hsa-miR-4731-5p 0 1 0
chr14:24148328|24148689 hsa-miR-6861-5p 1 0 0
chr14:24148328|24148689 hsa-miR-7106-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6825-5p 1 0 0
chr14:24148328|24148689 hsa-miR-4708-5p 0 1 0
chr14:24148328|24148689 hsa-miR-3192-5p 0 1 0
chr14:24148328|24148689 hsa-miR-6867-5p 1 0 0
chr14:24148328|24148689 hsa-miR-4722-5p 1 1 0
chr14:24148328|24148689 hsa-miR-505-5p 0 1 0
chr14:24148328|24148689 hsa-miR-4655-5p 1 0 0
chr14:24148328|24148689 hsa-miR-7845-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6871-5p 0 1 0
chr14:24148328|24148689 hsa-miR-6772-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6868-3p 0 1 0
chr14:24148328|24148689 hsa-miR-6827-5p 1 1 0
chr14:24148328|24148689 hsa-miR-6798-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6782-5p 1 0 0
chr14:24148328|24148689 hsa-miR-5006-5p 1 0 0
chr14:24148328|24148689 hsa-miR-5088-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6784-5p 1 1 0
chr14:24148328|24148689 hsa-miR-4640-5p 1 1 0
chr14:24148328|24148689 hsa-miR-6753-5p 1 1 0
chr14:24148328|24148689 hsa-miR-3127-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6771-5p 1 0 0
chr14:24148328|24148689 hsa-miR-4690-5p 0 1 0
chr14:24148328|24148689 hsa-miR-6823-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6834-5p 1 1 0
chr14:24148328|24148689 hsa-miR-149-3p 1 0 0
chr14:24148328|24148689 hsa-miR-4733-3p 0 1 0
chr14:24148328|24148689 hsa-miR-6824-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6892-5p 1 1 0
chr14:24148328|24148689 hsa-miR-4776-5p 1 0 0
chr14:24148328|24148689 hsa-miR-1225-5p 1 0 0
chr14:24148328|24148689 hsa-miR-3158-3p 0 1 0
chr14:24148328|24148689 hsa-miR-106b-3p 1 1 0
chr14:24148328|24148689 hsa-miR-503-3p 1 0 0
chr14:24148328|24148689 hsa-miR-6859-3p 0 1 0
chr14:24148328|24148689 hsa-miR-3670 0 1 0
chr14:24148328|24148689 hsa-miR-29b-3p 0 1 0
chr14:24148328|24148689 hsa-miR-6870-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6775-5p 1 0 0
chr14:24148328|24148689 hsa-miR-1343-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6726-5p 1 1 0
chr14:24148328|24148689 hsa-miR-6754-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6803-5p 1 0 0
chr14:24148328|24148689 hsa-miR-11181-3p 0 1 0
chr14:24148328|24148689 hsa-miR-1249-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6722-3p 1 0 0
chr14:24148328|24148689 hsa-miR-6751-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6779-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6780a-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6797-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6780b-5p 1 0 0
chr14:24148328|24148689 hsa-miR-10396a-5p 1 0 0
chr14:24148328|24148689 hsa-miR-1909-3p 1 0 0
chr14:24148328|24148689 hsa-miR-328-5p 1 0 0
chr14:24148328|24148689 hsa-miR-4685-5p 1 1 0
chr14:24148328|24148689 hsa-miR-4726-5p 1 1 0
chr14:24148328|24148689 hsa-miR-6729-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6794-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6846-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6848-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6883-5p 1 1 0
chr14:24148328|24148689 hsa-miR-4723-5p 1 1 0
chr14:24148328|24148689 hsa-miR-6845-5p 1 0 0
chr14:24148328|24148689 hsa-miR-1266-5p 1 0 0
chr14:24148328|24148689 hsa-miR-6785-5p 1 1 0
chr14:24148328|24148689 hsa-miR-4667-5p 0 1 0
chr14:24148328|24148689 hsa-miR-6790-5p 1 0 0
chr14:24148328|24148689 hsa-miR-769-3p 1 0 0
chr14:24148328|24148689 hsa-miR-5009-5p 0 1 0
chr14:24148328|24148689 hsa-miR-6837-5p 1 1 0
chr14:24148328|24148689 hsa-miR-3619-5p 1 1 0
chr14:24148328|24148689 hsa-miR-4690-3p 1 0 0
chr14:24148328|24148689 hsa-miR-520a-3p 0 1 0
chr14:24148328|24148689 hsa-miR-7157-5p 0 1 0
chr14:24148328|24148689 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:24148328|24148689
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MLNYAHSSAARGSSNLLELGWAPQPWCISPSRLEEHLTCNSRLSSVRSSSTSSVTVATWCSSGSSC
Nucleotide Sequence ATGCTGAACTATGCCCATAGTTCAGCAGCACGGGGGTCCTCAAACTTACTTGAGTTAGGCTGGGCTCCCCAGCCCTGGTGCATAAGTCCATCAAGACTAGAGGAGCATCTCACCTGCAATAGCAGGCTGAGCTCTGTCCGAAGCAGCAGTACTTCCAGTGTGACTGTAGCAACCTGGTGCTCATCTGGCTCCTCCTGC
CircID chr14:24148328|24148689
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MMDLCTRAGEPSLTQVSLRTPVLLNYGHSSAFWELRVLIFLL
Nucleotide Sequence TTGATGGACTTATGCACCAGGGCTGGGGAGCCCAGCCTAACTCAAGTAAGTTTGAGGACCCCCGTGCTGCTGAACTATGGGCATAGTTCAGCATTCTGGGAGCTCCGGGTACTGATTTTCCTTCTGTGA
CircID chr14:24148328|24148689
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MLRDQGLEGGLCSRGLAGNRFYLYYCRILIQDSRHWSSCWKT
Nucleotide Sequence ATGTTAAGGGACCAGGGCTTAGAGGGAGGGCTTTGTTCTAGGGGTCTAGCTGGAAACCGTTTTTATCTGTATTATTGCAGAATACTCATCCAAGACAGCAGGCACTGGAGCAGCTGTTGGAAGACA
CircID chr14:24148328|24148689
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence METVFICIIAEYSSKTAGTGAAVGRQ
Nucleotide Sequence CTGGAAACCGTTTTTATCTGTATTATTGCAGAATACTCATCCAAGACAGCAGGCACTGGAGCAGCTGTTGGAAGACAA
CircID chr14:24148328|24148689
ORF Type ORF5
Protein Length 49
Nucleotide Length 150
Protein Sequence MEVLLLRTELSLLLQVRCSSSLDGLMHQGWGAQPNSSKFEDPRAAELWA
Nucleotide Sequence CTGGAAGTACTGCTGCTTCGGACAGAGCTCAGCCTGCTATTGCAGGTGAGATGCTCCTCTAGTCTTGATGGACTTATGCACCAGGGCTGGGGAGCCCAGCCTAACTCAAGTAAGTTTGAGGACCCCCGTGCTGCTGAACTATGGGCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab