CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24162144|24162254
Strand +
CircType exon
Host Gene ENSG00000259529.1;
Algorism CIRI2;
Sequence ATGGTCTTAGCTGTATCATCCCAGCACACTCCGGGAAACTGCCCACTCTCCACTTGCTCCACCACCCAGTTCCGGAGTTTTCGGGTGCAGCGTGCCCTGCCTGATGCCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24162144|24162254 hsa-miR-122-5p 0 0 1
chr14:24162144|24162254 hsa-miR-122-3p 0 0 1
chr14:24162144|24162254 hsa-miR-185-5p 0 0 1
chr14:24162144|24162254 hsa-miR-185-3p 0 0 1
chr14:24162144|24162254 hsa-miR-648 0 1 1
chr14:24162144|24162254 hsa-miR-940 1 1 1
chr14:24162144|24162254 hsa-miR-1293 1 0 1
chr14:24162144|24162254 hsa-miR-574-5p 0 0 1
chr14:24162144|24162254 hsa-miR-1207-5p 1 1 1
chr14:24162144|24162254 hsa-miR-608 1 0 0
chr14:24162144|24162254 hsa-miR-663a 1 1 0
chr14:24162144|24162254 hsa-miR-2861 1 0 0
chr14:24162144|24162254 hsa-miR-3138 1 0 0
chr14:24162144|24162254 hsa-miR-3147 1 0 0
chr14:24162144|24162254 hsa-miR-3165 1 0 0
chr14:24162144|24162254 hsa-miR-4260 1 0 0
chr14:24162144|24162254 hsa-miR-4425 1 0 0
chr14:24162144|24162254 hsa-miR-3135b 1 0 0
chr14:24162144|24162254 hsa-miR-4463 1 0 0
chr14:24162144|24162254 hsa-miR-3689c 1 0 0
chr14:24162144|24162254 hsa-miR-4492 1 0 0
chr14:24162144|24162254 hsa-miR-4539 1 0 0
chr14:24162144|24162254 hsa-miR-4692 0 1 0
chr14:24162144|24162254 hsa-miR-4718 0 1 0
chr14:24162144|24162254 hsa-miR-5192 1 1 0
chr14:24162144|24162254 hsa-miR-6081 1 0 0
chr14:24162144|24162254 hsa-miR-6090 1 0 0
chr14:24162144|24162254 hsa-miR-6127 1 0 0
chr14:24162144|24162254 hsa-miR-6165 1 0 0
chr14:24162144|24162254 hsa-miR-12114 1 0 0
chr14:24162144|24162254 hsa-miR-12115 1 1 0
chr14:24162144|24162254 hsa-miR-6861-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6799-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6728-5p 0 1 0
chr14:24162144|24162254 hsa-miR-8071 1 0 0
chr14:24162144|24162254 hsa-miR-3192-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6880-5p 1 1 0
chr14:24162144|24162254 hsa-miR-7847-3p 1 0 0
chr14:24162144|24162254 hsa-miR-6741-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6776-5p 1 1 0
chr14:24162144|24162254 hsa-miR-3682-3p 0 1 0
chr14:24162144|24162254 hsa-miR-3151-5p 1 0 0
chr14:24162144|24162254 hsa-miR-4711-5p 0 1 0
chr14:24162144|24162254 hsa-miR-6748-5p 1 0 0
chr14:24162144|24162254 hsa-miR-3130-3p 0 1 0
chr14:24162144|24162254 hsa-miR-6821-5p 1 0 0
chr14:24162144|24162254 hsa-miR-30b-3p 1 0 0
chr14:24162144|24162254 hsa-miR-6786-5p 1 0 0
chr14:24162144|24162254 hsa-miR-3944-3p 1 0 0
chr14:24162144|24162254 hsa-miR-1229-5p 1 0 0
chr14:24162144|24162254 hsa-miR-4690-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6749-5p 1 0 0
chr14:24162144|24162254 hsa-miR-7112-5p 1 1 0
chr14:24162144|24162254 hsa-miR-3689b-3p 1 0 0
chr14:24162144|24162254 hsa-miR-4763-3p 1 1 0
chr14:24162144|24162254 hsa-miR-6769b-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6812-5p 0 1 0
chr14:24162144|24162254 hsa-miR-6893-5p 1 1 0
chr14:24162144|24162254 hsa-miR-1343-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6726-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6737-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6756-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6819-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6851-5p 1 0 0
chr14:24162144|24162254 hsa-miR-1249-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6763-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6808-5p 0 1 0
chr14:24162144|24162254 hsa-miR-6879-5p 1 0 0
chr14:24162144|24162254 hsa-miR-10396b-5p 1 0 0
chr14:24162144|24162254 hsa-miR-328-5p 1 0 0
chr14:24162144|24162254 hsa-miR-3689a-3p 1 0 0
chr14:24162144|24162254 hsa-miR-4701-3p 1 0 0
chr14:24162144|24162254 hsa-miR-4745-5p 1 1 0
chr14:24162144|24162254 hsa-miR-6777-5p 1 0 0
chr14:24162144|24162254 hsa-miR-1238-5p 1 0 0
chr14:24162144|24162254 hsa-miR-4758-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6736-5p 1 0 0
chr14:24162144|24162254 hsa-miR-10398-3p 1 1 0
chr14:24162144|24162254 hsa-miR-6766-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6849-5p 1 0 0
chr14:24162144|24162254 hsa-miR-619-5p 0 1 0
chr14:24162144|24162254 hsa-miR-196b-5p 1 0 0
chr14:24162144|24162254 hsa-miR-6506-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:24162144|24162254
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MVLAVSSQHTPGNCPLSTCSTTQFRSFRVQRALPDAI
Nucleotide Sequence ATGGTCTTAGCTGTATCATCCCAGCACACTCCGGGAAACTGCCCACTCTCCACTTGCTCCACCACCCAGTTCCGGAGTTTTCGGGTGCAGCGTGCCCTGCCTGATGCCATC
CircID chr14:24162144|24162254
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MYHPSTLRETAHSPLAPPPSSGVFGCSVPCLMP
Nucleotide Sequence CTGTATCATCCCAGCACACTCCGGGAAACTGCCCACTCTCCACTTGCTCCACCACCCAGTTCCGGAGTTTTCGGGTGCAGCGTGCCCTGCCTGATGCCA
CircID chr14:24162144|24162254
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MASGRARCTRKLRNWVVEQVESGQFPGVCWDDTAKT
Nucleotide Sequence ATGGCATCAGGCAGGGCACGCTGCACCCGAAAACTCCGGAACTGGGTGGTGGAGCAAGTGGAGAGTGGGCAGTTTCCCGGAGTGTGCTGGGATGATACAGCTAAGACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab