CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24172548|24172923
Strand +
CircType exon
Host Gene ENSG00000100918.11;
Algorism CIRI2;
Sequence CAGCACGTAATTGAGGATTTCCTCGCAGGTTTTCACCACATTCACCCTCAGGTATTCGCGCTTCACCAACCGGCTGCCGCGAGTCGCCGCCAGCCTGAAGTGGGTGGGGAAGGTGGGAGAATGGGGATGGAGGGGGAGCTGTCAGGCTGGGATCCCGGGCAGCGTCCGCCATCGCGCGCCAACGGGCCCCGCCCTTACCAGATGGTGGCAAAGCAGCCGGTGTGGCGCTGAAGCACGTTGGGATAGTAGAACATTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24172548|24172923 hsa-miR-150-5p 0 0 1
chr14:24172548|24172923 hsa-miR-150-3p 0 0 1
chr14:24172548|24172923 hsa-miR-484 0 0 1
chr14:24172548|24172923 hsa-miR-570-5p 0 0 1
chr14:24172548|24172923 hsa-miR-570-3p 0 0 1
chr14:24172548|24172923 hsa-miR-744-5p 0 0 1
chr14:24172548|24172923 hsa-miR-744-3p 0 0 1
chr14:24172548|24172923 hsa-miR-1257 0 0 1
chr14:24172548|24172923 hsa-miR-1306-5p 0 0 1
chr14:24172548|24172923 hsa-miR-1306-3p 0 0 1
chr14:24172548|24172923 hsa-miR-532-3p 0 0 1
chr14:24172548|24172923 hsa-miR-1224-3p 0 1 1
chr14:24172548|24172923 hsa-miR-1260 0 0 1
chr14:24172548|24172923 hsa-miR-1280 0 0 1
chr14:24172548|24172923 hsa-miR-220a 0 0 1
chr14:24172548|24172923 hsa-miR-663 0 0 1
chr14:24172548|24172923 hsa-miR-923 0 0 1
chr14:24172548|24172923 hsa-miR-638 1 0 0
chr14:24172548|24172923 hsa-miR-661 1 1 0
chr14:24172548|24172923 hsa-miR-663a 0 1 0
chr14:24172548|24172923 hsa-miR-762 1 0 0
chr14:24172548|24172923 hsa-miR-1260a 0 1 0
chr14:24172548|24172923 hsa-miR-1469 1 0 0
chr14:24172548|24172923 hsa-miR-544b 0 1 0
chr14:24172548|24172923 hsa-miR-1260b 0 1 0
chr14:24172548|24172923 hsa-miR-4293 0 1 0
chr14:24172548|24172923 hsa-miR-4490 0 1 0
chr14:24172548|24172923 hsa-miR-3977 0 1 0
chr14:24172548|24172923 hsa-miR-4658 1 1 0
chr14:24172548|24172923 hsa-miR-5193 1 1 0
chr14:24172548|24172923 hsa-miR-7706 0 1 0
chr14:24172548|24172923 hsa-miR-6734-5p 1 0 0
chr14:24172548|24172923 hsa-miR-1247-3p 0 1 0
chr14:24172548|24172923 hsa-miR-6089 1 0 0
chr14:24172548|24172923 hsa-miR-6762-3p 0 1 0
chr14:24172548|24172923 hsa-miR-6727-5p 1 0 0
chr14:24172548|24172923 hsa-miR-6849-3p 1 1 0
chr14:24172548|24172923 hsa-miR-4713-5p 0 1 0
chr14:24172548|24172923 hsa-miR-615-3p 1 0 0
chr14:24172548|24172923 hsa-miR-3944-3p 1 1 0
chr14:24172548|24172923 hsa-miR-1908-5p 0 1 0
chr14:24172548|24172923 hsa-miR-5196-3p 0 1 0
chr14:24172548|24172923 hsa-miR-4446-3p 1 0 0
chr14:24172548|24172923 hsa-miR-6736-3p 1 1 0
chr14:24172548|24172923 hsa-miR-6789-5p 1 1 0
chr14:24172548|24172923 hsa-miR-6867-3p 0 1 0
chr14:24172548|24172923 hsa-miR-629-3p 0 1 0
chr14:24172548|24172923 hsa-miR-6887-3p 0 1 0
chr14:24172548|24172923 hsa-miR-3940-3p 0 1 0
chr14:24172548|24172923 hsa-miR-6826-3p 0 1 0
chr14:24172548|24172923 hsa-miR-1229-3p 0 1 0
chr14:24172548|24172923 hsa-miR-6734-3p 0 1 0
chr14:24172548|24172923 hsa-miR-6729-3p 0 1 0
chr14:24172548|24172923 hsa-miR-10400-5p 1 0 0
chr14:24172548|24172923 hsa-miR-5001-5p 1 0 0
chr14:24172548|24172923 hsa-miR-6751-5p 1 1 0
chr14:24172548|24172923 hsa-miR-320a-5p 0 1 0
chr14:24172548|24172923 hsa-miR-10396a-5p 0 1 0
chr14:24172548|24172923 hsa-miR-10396b-5p 0 1 0
chr14:24172548|24172923 hsa-miR-6724-5p 0 1 0
chr14:24172548|24172923 hsa-miR-6756-3p 1 0 0
chr14:24172548|24172923 hsa-miR-6751-3p 1 0 0
chr14:24172548|24172923 hsa-miR-3085-3p 0 1 0
chr14:24172548|24172923 hsa-miR-1234-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:24172548|24172923
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MGMEGELSGWDPGQRPPSRANGPRPYQMVAKQPVWR
Nucleotide Sequence ATGGGGATGGAGGGGGAGCTGTCAGGCTGGGATCCCGGGCAGCGTCCGCCATCGCGCGCCAACGGGCCCCGCCCTTACCAGATGGTGGCAAAGCAGCCGGTGTGGCGCTGA

CircID chr14:24172548|24172923
ORF Type ORF2
Protein Length 83
Nucleotide Length 249
Protein Sequence MRISSQVFTTFTLRYSRFTNRLPRVAASLKWVGKVGEWGWRGSCQAGIPGSVRHRAPTGPALTRWWQSSRCGAEARWDSRTLS
Nucleotide Sequence TTGAGGATTTCCTCGCAGGTTTTCACCACATTCACCCTCAGGTATTCGCGCTTCACCAACCGGCTGCCGCGAGTCGCCGCCAGCCTGAAGTGGGTGGGGAAGGTGGGAGAATGGGGATGGAGGGGGAGCTGTCAGGCTGGGATCCCGGGCAGCGTCCGCCATCGCGCGCCAACGGGCCCCGCCCTTACCAGATGGTGGCAAAGCAGCCGGTGTGGCGCTGAAGCACGTTGGGATAGTAGAACATTGTCC

CircID chr14:24172548|24172923
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MGSRAASAIARQRAPPLPDGGKAAGVALKHVGIVEHC
Nucleotide Sequence CTGGGATCCCGGGCAGCGTCCGCCATCGCGCGCCAACGGGCCCCGCCCTTACCAGATGGTGGCAAAGCAGCCGGTGTGGCGCTGAAGCACGTTGGGATAGTAGAACATTGT

CircID chr14:24172548|24172923
ORF Type ORF4
Protein Length 70
Nucleotide Length 210
Protein Sequence MPPSGKGGARWRAMADAARDPSLTAPPPSPFSHLPHPLQAGGDSRQPVGEARIPEGECGENLRGNPQLRA
Nucleotide Sequence TTGCCACCATCTGGTAAGGGCGGGGCCCGTTGGCGCGCGATGGCGGACGCTGCCCGGGATCCCAGCCTGACAGCTCCCCCTCCATCCCCATTCTCCCACCTTCCCCACCCACTTCAGGCTGGCGGCGACTCGCGGCAGCCGGTTGGTGAAGCGCGAATACCTGAGGGTGAATGTGGTGAAAACCTGCGAGGAAATCCTCAATTACGTGCT

CircID chr14:24172548|24172923
ORF Type ORF5
Protein Length 31
Nucleotide Length 93
Protein Sequence MAATRGSRLVKREYLRVNVVKTCEEILNYVL
Nucleotide Sequence CTGGCGGCGACTCGCGGCAGCCGGTTGGTGAAGCGCGAATACCTGAGGGTGAATGTGGTGAAAACCTGCGAGGAAATCCTCAATTACGTGCTG

CircID chr14:24172548|24172923
ORF Type ORF6
Protein Length 39
Nucleotide Length 120
Protein Sequence MARDGGRCPGSQPDSSPSIPILPPSPPTSGWRRLAAAGW
Nucleotide Sequence TTGGCGCGCGATGGCGGACGCTGCCCGGGATCCCAGCCTGACAGCTCCCCCTCCATCCCCATTCTCCCACCTTCCCCACCCACTTCAGGCTGGCGGCGACTCGCGGCAGCCGGTTGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites