CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24183590|24183835
Strand -
CircType exon
Host Gene ENSG00000196497.14;
Algorism CIRI2;
Sequence CTGGTGTTCACAGAGATCTCCCCCACGGCAGCACAGGTGTCTTCCTTCTCATCGAAGAAGGCATTCTCCACGCTGTACCTAGAGTAAGAAGGGGAGGCAGTGGTGATCAGGCACCAAGAGGAGCAGATCCAGCACTAGGCCCTTGTCTAAAGCCAAAGTCTAGATTCCTGATCAGAAGAGCACCCCTCCGCACCCTGAGATCTCTGAGTCATCCTCTTCTTCCACATCCTCATCCATGAGCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24183590|24183835 hsa-miR-197-5p 0 0 1
chr14:24183590|24183835 hsa-miR-197-3p 0 0 1
chr14:24183590|24183835 hsa-miR-383-5p 0 0 1
chr14:24183590|24183835 hsa-miR-383-3p 0 0 1
chr14:24183590|24183835 hsa-miR-520f-5p 0 0 1
chr14:24183590|24183835 hsa-miR-520f-3p 0 0 1
chr14:24183590|24183835 hsa-miR-625-5p 0 0 1
chr14:24183590|24183835 hsa-miR-625-3p 0 0 1
chr14:24183590|24183835 hsa-miR-658 0 1 1
chr14:24183590|24183835 hsa-miR-675-5p 0 0 1
chr14:24183590|24183835 hsa-miR-675-3p 0 0 1
chr14:24183590|24183835 hsa-miR-708-5p 0 0 1
chr14:24183590|24183835 hsa-miR-708-3p 0 0 1
chr14:24183590|24183835 hsa-miR-873-5p 0 0 1
chr14:24183590|24183835 hsa-miR-873-3p 0 0 1
chr14:24183590|24183835 hsa-miR-1287-5p 0 0 1
chr14:24183590|24183835 hsa-miR-1287-3p 0 0 1
chr14:24183590|24183835 hsa-miR-1248 0 0 1
chr14:24183590|24183835 hsa-miR-1253 0 0 1
chr14:24183590|24183835 hsa-miR-1255a 0 0 1
chr14:24183590|24183835 hsa-miR-1265 0 1 1
chr14:24183590|24183835 hsa-miR-1266-5p 0 0 1
chr14:24183590|24183835 hsa-miR-1266-3p 0 0 1
chr14:24183590|24183835 hsa-miR-1275 0 1 1
chr14:24183590|24183835 hsa-miR-1252-5p 0 0 1
chr14:24183590|24183835 hsa-miR-1252-3p 0 0 1
chr14:24183590|24183835 hsa-miR-512-3p 0 0 1
chr14:24183590|24183835 hsa-miR-532-5p 0 0 1
chr14:24183590|24183835 hsa-miR-28-5p 0 1 1
chr14:24183590|24183835 hsa-miR-490-5p 1 0 1
chr14:24183590|24183835 hsa-miR-767-3p 0 0 1
chr14:24183590|24183835 hsa-miR-342-5p 0 1 1
chr14:24183590|24183835 hsa-miR-220b 0 0 1
chr14:24183590|24183835 hsa-miR-550 0 0 1
chr14:24183590|24183835 hsa-miR-1255b 0 0 1
chr14:24183590|24183835 hsa-miR-7 0 0 1
chr14:24183590|24183835 hsa-miR-1300 0 0 1
chr14:24183590|24183835 hsa-miR-1201 0 0 1
chr14:24183590|24183835 hsa-miR-1185 0 0 1
chr14:24183590|24183835 hsa-miR-638 1 0 0
chr14:24183590|24183835 hsa-miR-920 1 0 0
chr14:24183590|24183835 hsa-miR-1303 1 0 0
chr14:24183590|24183835 hsa-miR-3139 1 1 0
chr14:24183590|24183835 hsa-miR-3185 1 1 0
chr14:24183590|24183835 hsa-miR-3911 1 0 0
chr14:24183590|24183835 hsa-miR-3916 1 0 0
chr14:24183590|24183835 hsa-miR-1268b 1 0 0
chr14:24183590|24183835 hsa-miR-4450 1 0 0
chr14:24183590|24183835 hsa-miR-4462 1 0 0
chr14:24183590|24183835 hsa-miR-4476 1 0 0
chr14:24183590|24183835 hsa-miR-2392 1 0 0
chr14:24183590|24183835 hsa-miR-4518 1 1 0
chr14:24183590|24183835 hsa-miR-4525 1 0 0
chr14:24183590|24183835 hsa-miR-4531 0 1 0
chr14:24183590|24183835 hsa-miR-4657 1 1 0
chr14:24183590|24183835 hsa-miR-4683 0 1 0
chr14:24183590|24183835 hsa-miR-4686 0 1 0
chr14:24183590|24183835 hsa-miR-4721 1 0 0
chr14:24183590|24183835 hsa-miR-5787 1 0 0
chr14:24183590|24183835 hsa-miR-6080 0 1 0
chr14:24183590|24183835 hsa-miR-6124 1 0 0
chr14:24183590|24183835 hsa-miR-6127 1 0 0
chr14:24183590|24183835 hsa-miR-6745 1 0 0
chr14:24183590|24183835 hsa-miR-12119 1 0 0
chr14:24183590|24183835 hsa-miR-12128 1 1 0
chr14:24183590|24183835 hsa-miR-7-5p 0 1 0
chr14:24183590|24183835 hsa-miR-6836-3p 0 1 0
chr14:24183590|24183835 hsa-miR-6894-5p 1 0 0
chr14:24183590|24183835 hsa-miR-766-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6804-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6833-5p 1 1 0
chr14:24183590|24183835 hsa-miR-5187-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6880-5p 1 0 0
chr14:24183590|24183835 hsa-miR-7847-3p 1 1 0
chr14:24183590|24183835 hsa-miR-6744-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6746-5p 1 0 0
chr14:24183590|24183835 hsa-miR-4653-3p 1 0 0
chr14:24183590|24183835 hsa-miR-4709-3p 1 0 0
chr14:24183590|24183835 hsa-miR-6776-5p 1 0 0
chr14:24183590|24183835 hsa-miR-3605-5p 0 1 0
chr14:24183590|24183835 hsa-miR-491-5p 0 1 0
chr14:24183590|24183835 hsa-miR-6772-5p 1 0 0
chr14:24183590|24183835 hsa-miR-3190-3p 1 1 0
chr14:24183590|24183835 hsa-miR-1224-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6770-5p 0 1 0
chr14:24183590|24183835 hsa-miR-6760-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6782-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6882-3p 1 1 0
chr14:24183590|24183835 hsa-miR-6788-3p 0 1 0
chr14:24183590|24183835 hsa-miR-5088-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6772-3p 0 1 0
chr14:24183590|24183835 hsa-miR-3691-5p 1 0 0
chr14:24183590|24183835 hsa-miR-4764-5p 1 1 0
chr14:24183590|24183835 hsa-miR-3127-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6823-5p 1 0 0
chr14:24183590|24183835 hsa-miR-877-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6717-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6828-3p 0 1 0
chr14:24183590|24183835 hsa-miR-4762-3p 0 1 0
chr14:24183590|24183835 hsa-miR-5088-3p 0 1 0
chr14:24183590|24183835 hsa-miR-5197-3p 0 1 0
chr14:24183590|24183835 hsa-miR-576-3p 0 1 0
chr14:24183590|24183835 hsa-miR-1233-5p 1 0 0
chr14:24183590|24183835 hsa-miR-4763-3p 0 1 0
chr14:24183590|24183835 hsa-miR-6778-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6870-5p 0 1 0
chr14:24183590|24183835 hsa-miR-6756-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6803-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6813-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6751-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6780a-5p 0 1 0
chr14:24183590|24183835 hsa-miR-6788-5p 1 1 0
chr14:24183590|24183835 hsa-miR-4649-5p 1 0 0
chr14:24183590|24183835 hsa-miR-4701-3p 1 1 0
chr14:24183590|24183835 hsa-miR-6858-5p 1 0 0
chr14:24183590|24183835 hsa-miR-6856-5p 1 0 0
chr14:24183590|24183835 hsa-miR-5008-3p 0 1 0
chr14:24183590|24183835 hsa-miR-4665-5p 1 1 0
chr14:24183590|24183835 hsa-miR-6736-5p 1 0 0
chr14:24183590|24183835 hsa-miR-4700-5p 1 0 0
chr14:24183590|24183835 hsa-miR-324-3p 1 1 0
chr14:24183590|24183835 hsa-miR-3679-5p 1 0 0
chr14:24183590|24183835 hsa-miR-4747-5p 1 0 0
chr14:24183590|24183835 hsa-miR-769-3p 1 0 0
chr14:24183590|24183835 hsa-miR-6529-5p 0 1 0
chr14:24183590|24183835 hsa-miR-7157-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:24183590|24183835
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LVFTEISPTAAQVSSFSSKKAFSTLYLE
Nucleotide Sequence CTGGTGTTCACAGAGATCTCCCCCACGGCAGCACAGGTGTCTTCCTTCTCATCGAAGAAGGCATTCTCCACGCTGTACCTAGAGTAA
CircID chr14:24183590|24183835
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MALDKGLVLDLLLLVPDHHCLPFLL
Nucleotide Sequence TTGGCTTTAGACAAGGGCCTAGTGCTGGATCTGCTCCTCTTGGTGCCTGATCACCACTGCCTCCCCTTCTTACTCTAG
CircID chr14:24183590|24183835
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MRMWKKRMTQRSQGAEGCSSDQESRLWL
Nucleotide Sequence ATGAGGATGTGGAAGAAGAGGATGACTCAGAGATCTCAGGGTGCGGAGGGGTGCTCTTCTGATCAGGAATCTAGACTTTGGCTTTAG
CircID chr14:24183590|24183835
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MITTASPSYSRYSVENAFFDEKEDTCAAVGEISVNT
Nucleotide Sequence CTGATCACCACTGCCTCCCCTTCTTACTCTAGGTACAGCGTGGAGAATGCCTTCTTCGATGAGAAGGAAGACACCTGTGCTGCCGTGGGGGAGATCTCTGTGAACACC
CircID chr14:24183590|24183835
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MPPLLTLGTAWRMPSSMRRKTPVLPWGRSL
Nucleotide Sequence CTGCCTCCCCTTCTTACTCTAGGTACAGCGTGGAGAATGCCTTCTTCGATGAGAAGGAAGACACCTGTGCTGCCGTGGGGGAGATCTCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab