CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24184895|24185235
Strand +
CircType exon
Host Gene ENSG00000196497.14;
Algorism CIRI2;
Sequence ACACCACCTAGCCAAGGCCTGCTATGCCCTGGAGAATTTTGTGGAGAACCTAGGTAGTGATGGCAGTGGGGAGCTTGGGGAAGGGGGATGAGGCGGCGGCTTTGGCTGAATGTACAGGATGTGCATCTCCCTGCATTGCTGCCTGTGGTAGGGGAAAGGGTGTGATGGTGCCAAAAAAAGGTTTCCGCCTGGAGGGAGGTGGGCGTGCAGGTAGCAGACCTGGGTTGGTTGGTAGAGGAGCATCCTTTCCCACAGGGCCCAAGGTGCAGCCCTACCTTCCGGAGCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24184895|24185235 hsa-miR-96-5p 0 0 1
chr14:24184895|24185235 hsa-miR-96-3p 0 0 1
chr14:24184895|24185235 hsa-miR-107 0 0 1
chr14:24184895|24185235 hsa-miR-181c-5p 0 0 1
chr14:24184895|24185235 hsa-miR-181c-3p 0 0 1
chr14:24184895|24185235 hsa-miR-182-5p 0 0 1
chr14:24184895|24185235 hsa-miR-182-3p 0 0 1
chr14:24184895|24185235 hsa-miR-328-5p 0 0 1
chr14:24184895|24185235 hsa-miR-328-3p 0 0 1
chr14:24184895|24185235 hsa-miR-181d-5p 0 0 1
chr14:24184895|24185235 hsa-miR-181d-3p 0 0 1
chr14:24184895|24185235 hsa-miR-586 0 0 1
chr14:24184895|24185235 hsa-miR-587 0 0 1
chr14:24184895|24185235 hsa-miR-635 0 1 1
chr14:24184895|24185235 hsa-miR-1271-5p 0 0 1
chr14:24184895|24185235 hsa-miR-1271-3p 0 0 1
chr14:24184895|24185235 hsa-miR-766-5p 0 0 1
chr14:24184895|24185235 hsa-miR-766-3p 0 0 1
chr14:24184895|24185235 hsa-miR-1228-5p 0 0 1
chr14:24184895|24185235 hsa-miR-1228-3p 0 0 1
chr14:24184895|24185235 hsa-miR-1291 0 0 1
chr14:24184895|24185235 hsa-miR-1288-5p 0 0 1
chr14:24184895|24185235 hsa-miR-1288-3p 0 0 1
chr14:24184895|24185235 hsa-miR-129-5p 0 0 1
chr14:24184895|24185235 hsa-miR-486-5p 1 0 1
chr14:24184895|24185235 hsa-miR-296-5p 0 0 1
chr14:24184895|24185235 hsa-miR-767-5p 0 0 1
chr14:24184895|24185235 hsa-miR-146b-3p 0 0 1
chr14:24184895|24185235 hsa-miR-1184 0 0 1
chr14:24184895|24185235 hsa-miR-1224-3p 0 1 1
chr14:24184895|24185235 hsa-miR-140-3p 0 0 1
chr14:24184895|24185235 hsa-miR-34c-3p 0 0 1
chr14:24184895|24185235 hsa-miR-515-5p 0 0 1
chr14:24184895|24185235 hsa-miR-103 0 0 1
chr14:24184895|24185235 hsa-miR-181a 0 0 1
chr14:24184895|24185235 hsa-miR-181b 0 0 1
chr14:24184895|24185235 hsa-miR-220a 0 0 1
chr14:24184895|24185235 hsa-miR-346 1 0 0
chr14:24184895|24185235 hsa-miR-760 1 0 0
chr14:24184895|24185235 hsa-miR-1181 1 0 0
chr14:24184895|24185235 hsa-miR-1204 1 0 0
chr14:24184895|24185235 hsa-miR-1281 1 0 0
chr14:24184895|24185235 hsa-miR-1538 1 1 0
chr14:24184895|24185235 hsa-miR-1913 1 0 0
chr14:24184895|24185235 hsa-miR-3170 0 1 0
chr14:24184895|24185235 hsa-miR-3908 0 1 0
chr14:24184895|24185235 hsa-miR-3937 0 1 0
chr14:24184895|24185235 hsa-miR-3945 0 1 0
chr14:24184895|24185235 hsa-miR-4448 0 1 0
chr14:24184895|24185235 hsa-miR-4449 1 0 0
chr14:24184895|24185235 hsa-miR-4469 0 1 0
chr14:24184895|24185235 hsa-miR-4514 0 1 0
chr14:24184895|24185235 hsa-miR-4525 0 1 0
chr14:24184895|24185235 hsa-miR-4642 1 0 0
chr14:24184895|24185235 hsa-miR-5193 0 1 0
chr14:24184895|24185235 hsa-miR-6072 0 1 0
chr14:24184895|24185235 hsa-miR-6125 0 1 0
chr14:24184895|24185235 hsa-miR-8052 0 1 0
chr14:24184895|24185235 hsa-miR-9899 1 0 0
chr14:24184895|24185235 hsa-miR-12133 0 1 0
chr14:24184895|24185235 hsa-miR-4731-5p 0 1 0
chr14:24184895|24185235 hsa-miR-3157-5p 1 0 0
chr14:24184895|24185235 hsa-miR-4726-3p 0 1 0
chr14:24184895|24185235 hsa-miR-212-5p 0 1 0
chr14:24184895|24185235 hsa-miR-4708-5p 0 1 0
chr14:24184895|24185235 hsa-miR-6892-3p 1 0 0
chr14:24184895|24185235 hsa-miR-210-5p 1 0 0
chr14:24184895|24185235 hsa-miR-593-5p 1 1 0
chr14:24184895|24185235 hsa-miR-4761-3p 0 1 0
chr14:24184895|24185235 hsa-miR-23b-5p 0 1 0
chr14:24184895|24185235 hsa-miR-3189-5p 1 0 0
chr14:24184895|24185235 hsa-miR-877-3p 1 1 0
chr14:24184895|24185235 hsa-miR-4655-3p 1 0 0
chr14:24184895|24185235 hsa-miR-23a-5p 0 1 0
chr14:24184895|24185235 hsa-miR-6798-5p 0 1 0
chr14:24184895|24185235 hsa-miR-6882-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6884-3p 1 1 0
chr14:24184895|24185235 hsa-miR-1226-5p 1 1 0
chr14:24184895|24185235 hsa-miR-1908-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6894-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6753-5p 1 1 0
chr14:24184895|24185235 hsa-miR-7113-3p 1 0 0
chr14:24184895|24185235 hsa-miR-4690-5p 1 1 0
chr14:24184895|24185235 hsa-miR-4783-5p 1 1 0
chr14:24184895|24185235 hsa-miR-5196-3p 1 0 0
chr14:24184895|24185235 hsa-miR-4667-3p 1 0 0
chr14:24184895|24185235 hsa-miR-1306-5p 0 1 0
chr14:24184895|24185235 hsa-miR-3189-3p 0 1 0
chr14:24184895|24185235 hsa-miR-6870-3p 1 1 0
chr14:24184895|24185235 hsa-miR-1236-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6785-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6813-3p 0 1 0
chr14:24184895|24185235 hsa-miR-7112-3p 1 1 0
chr14:24184895|24185235 hsa-miR-4632-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6746-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6738-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6795-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6880-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6798-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6734-3p 0 1 0
chr14:24184895|24185235 hsa-miR-6515-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6812-3p 1 0 0
chr14:24184895|24185235 hsa-miR-1249-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6729-3p 1 1 0
chr14:24184895|24185235 hsa-miR-3162-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6509-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6731-3p 1 0 0
chr14:24184895|24185235 hsa-miR-500a-3p 0 1 0
chr14:24184895|24185235 hsa-miR-885-5p 1 0 0
chr14:24184895|24185235 hsa-miR-3127-3p 1 1 0
chr14:24184895|24185235 hsa-miR-4685-3p 1 0 0
chr14:24184895|24185235 hsa-miR-4685-5p 0 1 0
chr14:24184895|24185235 hsa-miR-4745-3p 0 1 0
chr14:24184895|24185235 hsa-miR-6846-5p 1 0 0
chr14:24184895|24185235 hsa-miR-6889-5p 1 0 0
chr14:24184895|24185235 hsa-miR-365a-5p 1 0 0
chr14:24184895|24185235 hsa-miR-6773-5p 0 1 0
chr14:24184895|24185235 hsa-miR-6855-5p 0 1 0
chr14:24184895|24185235 hsa-miR-6877-3p 1 0 0
chr14:24184895|24185235 hsa-miR-324-3p 1 0 0
chr14:24184895|24185235 hsa-miR-4747-5p 0 1 0
chr14:24184895|24185235 hsa-miR-769-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6756-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6837-5p 0 1 0
chr14:24184895|24185235 hsa-miR-9851-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6819-3p 1 0 0
chr14:24184895|24185235 hsa-miR-6891-3p 1 1 0
chr14:24184895|24185235 hsa-miR-6817-5p 0 1 0
chr14:24184895|24185235 hsa-miR-3619-5p 1 0 0
chr14:24184895|24185235 hsa-miR-6827-3p 1 0 0
chr14:24184895|24185235 hsa-miR-4769-3p 0 1 0
chr14:24184895|24185235 hsa-miR-6503-5p 0 1 0
chr14:24184895|24185235 hsa-miR-3059-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:24184895|24185235
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MRRRLWLNVQDVHLPALLPVVGERV
Nucleotide Sequence ATGAGGCGGCGGCTTTGGCTGAATGTACAGGATGTGCATCTCCCTGCATTGCTGCCTGTGGTAGGGGAAAGGGTGTGA
CircID chr14:24184895|24185235
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MGWLVEEHPFPQGPRCSPTFRSLWNACCSF
Nucleotide Sequence CTGGGTTGGTTGGTAGAGGAGCATCCTTTCCCACAGGGCCCAAGGTGCAGCCCTACCTTCCGGAGCTTATGGAATGCATGCTGCAGCTTCTGA
CircID chr14:24184895|24185235
ORF Type ORF3
Protein Length 94
Nucleotide Length 282
Protein Sequence MAVGSLGKGDEAAALAECTGCASPCIAACGRGKGVMVPKKGFRLEGGGRAGSRPGLVGRGASFPTGPKVQPYLPELMECMLQLLRNPSSPRAKE
Nucleotide Sequence ATGGCAGTGGGGAGCTTGGGGAAGGGGGATGAGGCGGCGGCTTTGGCTGAATGTACAGGATGTGCATCTCCCTGCATTGCTGCCTGTGGTAGGGGAAAGGGTGTGATGGTGCCAAAAAAAGGTTTCCGCCTGGAGGGAGGTGGGCGTGCAGGTAGCAGACCTGGGTTGGTTGGTAGAGGAGCATCCTTTCCCACAGGGCCCAAGGTGCAGCCCTACCTTCCGGAGCTTATGGAATGCATGCTGCAGCTTCTGAGGAACCCCAGCAGTCCCCGGGCCAAGGAG
CircID chr14:24184895|24185235
ORF Type ORF4
Protein Length 101
Nucleotide Length 303
Protein Sequence MQHAFHKLRKVGLHLGPCGKGCSSTNQPRSATCTPTSLQAETFFWHHHTLSPTTGSNAGRCTSCTFSQSRRLIPLPQAPHCHHYLGSPQNSPGHSRPWLGG
Nucleotide Sequence CTGCAGCATGCATTCCATAAGCTCCGGAAGGTAGGGCTGCACCTTGGGCCCTGTGGGAAAGGATGCTCCTCTACCAACCAACCCAGGTCTGCTACCTGCACGCCCACCTCCCTCCAGGCGGAAACCTTTTTTTGGCACCATCACACCCTTTCCCCTACCACAGGCAGCAATGCAGGGAGATGCACATCCTGTACATTCAGCCAAAGCCGCCGCCTCATCCCCCTTCCCCAAGCTCCCCACTGCCATCACTACCTAGGTTCTCCACAAAATTCTCCAGGGCATAGCAGGCCTTGGCTAGGTGGT
CircID chr14:24184895|24185235
ORF Type ORF5
Protein Length 70
Nucleotide Length 213
Protein Sequence MGPVGKDAPLPTNPGLLPARPPPSRRKPFFGTITPFPLPQAAMQGDAHPVHSAKAAASSPFPKLPTAITT
Nucleotide Sequence TTGGGCCCTGTGGGAAAGGATGCTCCTCTACCAACCAACCCAGGTCTGCTACCTGCACGCCCACCTCCCTCCAGGCGGAAACCTTTTTTTGGCACCATCACACCCTTTCCCCTACCACAGGCAGCAATGCAGGGAGATGCACATCCTGTACATTCAGCCAAAGCCGCCGCCTCATCCCCCTTCCCCAAGCTCCCCACTGCCATCACTACCTAG
CircID chr14:24184895|24185235
ORF Type ORF6
Protein Length 77
Nucleotide Length 234
Protein Sequence MWERMLLYQPTQVCYLHAHLPPGGNLFLAPSHPFPYHRQQCREMHILYIQPKPPPHPPSPSSPLPSLPRFSTKFSRA
Nucleotide Sequence CTGTGGGAAAGGATGCTCCTCTACCAACCAACCCAGGTCTGCTACCTGCACGCCCACCTCCCTCCAGGCGGAAACCTTTTTTTGGCACCATCACACCCTTTCCCCTACCACAGGCAGCAATGCAGGGAGATGCACATCCTGTACATTCAGCCAAAGCCGCCGCCTCATCCCCCTTCCCCAAGCTCCCCACTGCCATCACTACCTAGGTTCTCCACAAAATTCTCCAGGGCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab