CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24240774|24241072
Strand +
CircType exon
Host Gene ENSG00000092330.14;
Algorism CIRI2;
Sequence CTCTTCTCTTGCCTGGAGACAATATGGTGTGGACATGGGGTGGCTGCTTCCAGGTACTAGGAATTTGGAGGTGTAGTGTTTAGCCTGAGACCTTTTGAGGCAGTCCACTGGAATAGTTCCATGGGCTCCGGGCATAAGAAACCAGTTATTCTGTTACTATCTGTTCTCTTTATAAGGGGCCTCATTTTCTTTTTCAGAGTGCTCTGTTACTGACTCAGTGAACCTGGCTGAGCCCATGGAACAGAATCCTCCTCAGCAACAAAGACTAGCACTCCACAATCCCCTGCCAAAAGCCAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24240774|24241072 hsa-miR-31-5p 0 0 1
chr14:24240774|24241072 hsa-miR-31-3p 0 0 1
chr14:24240774|24241072 hsa-miR-96-5p 0 0 1
chr14:24240774|24241072 hsa-miR-96-3p 0 0 1
chr14:24240774|24241072 hsa-miR-182-5p 0 0 1
chr14:24240774|24241072 hsa-miR-182-3p 0 0 1
chr14:24240774|24241072 hsa-miR-122-5p 0 0 1
chr14:24240774|24241072 hsa-miR-122-3p 0 0 1
chr14:24240774|24241072 hsa-miR-340-5p 0 0 1
chr14:24240774|24241072 hsa-miR-340-3p 0 0 1
chr14:24240774|24241072 hsa-miR-384 0 0 1
chr14:24240774|24241072 hsa-miR-484 0 0 1
chr14:24240774|24241072 hsa-miR-583 0 0 1
chr14:24240774|24241072 hsa-miR-619-5p 0 0 1
chr14:24240774|24241072 hsa-miR-619-3p 0 0 1
chr14:24240774|24241072 hsa-miR-1271-5p 0 0 1
chr14:24240774|24241072 hsa-miR-1271-3p 0 0 1
chr14:24240774|24241072 hsa-miR-766-5p 0 0 1
chr14:24240774|24241072 hsa-miR-766-3p 0 0 1
chr14:24240774|24241072 hsa-miR-802 0 0 1
chr14:24240774|24241072 hsa-miR-1203 0 1 1
chr14:24240774|24241072 hsa-miR-1253 0 0 1
chr14:24240774|24241072 hsa-miR-1266-5p 0 0 1
chr14:24240774|24241072 hsa-miR-1266-3p 0 0 1
chr14:24240774|24241072 hsa-miR-1276 0 0 1
chr14:24240774|24241072 hsa-miR-1279 0 0 1
chr14:24240774|24241072 hsa-miR-1288-5p 0 0 1
chr14:24240774|24241072 hsa-miR-1288-3p 0 0 1
chr14:24240774|24241072 hsa-miR-1825 0 0 1
chr14:24240774|24241072 hsa-miR-671-5p 0 0 1
chr14:24240774|24241072 hsa-miR-145-5p 0 0 1
chr14:24240774|24241072 hsa-miR-142-5p 0 0 1
chr14:24240774|24241072 hsa-miR-199a-5p 0 0 1
chr14:24240774|24241072 hsa-miR-628-5p 0 0 1
chr14:24240774|24241072 hsa-miR-199b-5p 0 0 1
chr14:24240774|24241072 hsa-miR-1207-5p 1 1 1
chr14:24240774|24241072 hsa-miR-582-3p 0 0 1
chr14:24240774|24241072 hsa-miR-1269 0 0 1
chr14:24240774|24241072 hsa-miR-24 0 0 1
chr14:24240774|24241072 hsa-miR-194 0 0 1
chr14:24240774|24241072 hsa-miR-4420 0 1 0
chr14:24240774|24241072 hsa-miR-4437 0 1 0
chr14:24240774|24241072 hsa-miR-4450 0 1 0
chr14:24240774|24241072 hsa-miR-4525 1 0 0
chr14:24240774|24241072 hsa-miR-3975 0 1 0
chr14:24240774|24241072 hsa-miR-4673 0 1 0
chr14:24240774|24241072 hsa-miR-5093 1 0 0
chr14:24240774|24241072 hsa-miR-5702 0 1 0
chr14:24240774|24241072 hsa-miR-5787 1 0 0
chr14:24240774|24241072 hsa-miR-7150 1 1 0
chr14:24240774|24241072 hsa-miR-8077 1 0 0
chr14:24240774|24241072 hsa-miR-29b-1-5p 0 1 0
chr14:24240774|24241072 hsa-miR-3157-5p 0 1 0
chr14:24240774|24241072 hsa-miR-205-3p 0 1 0
chr14:24240774|24241072 hsa-miR-4687-3p 1 0 0
chr14:24240774|24241072 hsa-miR-6510-5p 1 0 0
chr14:24240774|24241072 hsa-miR-6089 1 0 0
chr14:24240774|24241072 hsa-miR-7847-3p 1 0 0
chr14:24240774|24241072 hsa-miR-7160-5p 1 0 0
chr14:24240774|24241072 hsa-miR-6721-5p 1 0 0
chr14:24240774|24241072 hsa-miR-3189-5p 1 0 0
chr14:24240774|24241072 hsa-miR-5008-5p 1 1 0
chr14:24240774|24241072 hsa-miR-6858-3p 1 0 0
chr14:24240774|24241072 hsa-miR-3944-3p 1 0 0
chr14:24240774|24241072 hsa-miR-1229-5p 1 0 0
chr14:24240774|24241072 hsa-miR-1228-5p 1 0 0
chr14:24240774|24241072 hsa-miR-937-5p 0 1 0
chr14:24240774|24241072 hsa-miR-3925-5p 1 1 0
chr14:24240774|24241072 hsa-miR-6828-5p 0 1 0
chr14:24240774|24241072 hsa-miR-208a-5p 1 0 0
chr14:24240774|24241072 hsa-miR-4632-3p 1 0 0
chr14:24240774|24241072 hsa-miR-6746-3p 1 1 0
chr14:24240774|24241072 hsa-miR-3675-5p 1 1 0
chr14:24240774|24241072 hsa-miR-4797-3p 0 1 0
chr14:24240774|24241072 hsa-miR-5002-3p 0 1 0
chr14:24240774|24241072 hsa-miR-4763-3p 1 1 0
chr14:24240774|24241072 hsa-miR-6787-5p 1 0 0
chr14:24240774|24241072 hsa-miR-6812-5p 1 0 0
chr14:24240774|24241072 hsa-miR-6752-5p 1 0 0
chr14:24240774|24241072 hsa-miR-6722-3p 1 1 0
chr14:24240774|24241072 hsa-miR-6808-5p 1 0 0
chr14:24240774|24241072 hsa-miR-3620-5p 1 0 0
chr14:24240774|24241072 hsa-miR-1909-3p 1 0 0
chr14:24240774|24241072 hsa-miR-6858-5p 0 1 0
chr14:24240774|24241072 hsa-miR-3199 0 1 0
chr14:24240774|24241072 hsa-miR-10398-3p 0 1 0
chr14:24240774|24241072 hsa-miR-6784-3p 1 0 0
chr14:24240774|24241072 hsa-miR-520d-3p 0 1 0
chr14:24240774|24241072 hsa-miR-3059-3p 0 1 0
chr14:24240774|24241072 hsa-miR-4645-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:24240774|24241072
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MRPFEAVHWNSSMGSGHKKPVILLLSVLFIRGLIFFFRVLCY
Nucleotide Sequence CTGAGACCTTTTGAGGCAGTCCACTGGAATAGTTCCATGGGCTCCGGGCATAAGAAACCAGTTATTCTGTTACTATCTGTTCTCTTTATAAGGGGCCTCATTTTCTTTTTCAGAGTGCTCTGTTACTGA
CircID chr14:24240774|24241072
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MRQSTGIVPWAPGIRNQLFCYYLFSL
Nucleotide Sequence TTGAGGCAGTCCACTGGAATAGTTCCATGGGCTCCGGGCATAAGAAACCAGTTATTCTGTTACTATCTGTTCTCTTTATAA
CircID chr14:24240774|24241072
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MAEPMEQNPPQQQRLALHNPLPKAK
Nucleotide Sequence CTGGCTGAGCCCATGGAACAGAATCCTCCTCAGCAACAAAGACTAGCACTCCACAATCCCCTGCCAAAAGCCAAG
CircID chr14:24240774|24241072
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MAGDCGVLVFVAEEDSVPWAQPGSLSQ
Nucleotide Sequence TTGGCAGGGGATTGTGGAGTGCTAGTCTTTGTTGCTGAGGAGGATTCTGTTCCATGGGCTCAGCCAGGTTCACTGAGTCAGTAA
CircID chr14:24240774|24241072
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MKKKMRPLIKRTDSNRITGFLCPEPMELFQWTASKGLRLNTTPPNS
Nucleotide Sequence CTGAAAAAGAAAATGAGGCCCCTTATAAAGAGAACAGATAGTAACAGAATAACTGGTTTCTTATGCCCGGAGCCCATGGAACTATTCCAGTGGACTGCCTCAAAAGGTCTCAGGCTAAACACTACACCTCCAAATTCCTAG
CircID chr14:24240774|24241072
ORF Type ORF6
Protein Length 26
Nucleotide Length 81
Protein Sequence MGSARFTESVTEHSEKENEAPYKENR
Nucleotide Sequence ATGGGCTCAGCCAGGTTCACTGAGTCAGTAACAGAGCACTCTGAAAAAGAAAATGAGGCCCCTTATAAAGAGAACAGATAG
CircID chr14:24240774|24241072
ORF Type ORF7
Protein Length 45
Nucleotide Length 135
Protein Sequence MPGAHGTIPVDCLKRSQAKHYTSKFLVPGSSHPMSTPYCLQAREE
Nucleotide Sequence ATGCCCGGAGCCCATGGAACTATTCCAGTGGACTGCCTCAAAAGGTCTCAGGCTAAACACTACACCTCCAAATTCCTAGTACCTGGAAGCAGCCACCCCATGTCCACACCATATTGTCTCCAGGCAAGAGAAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab