CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24369837|24370015
Strand -
CircType exon
Host Gene ENSG00000100968.12;
Algorism CIRI2;
Sequence CCCCCACCAGAAGGCTTTGGGGGCTACAGAGAAGCAGGGGGCCAGGGTGGGGGGGCCTTCTTCAGCCCAAGCCCTGGCAGCAGCAGCCTGTCCTCGTGGAGCTTCTTCTCCGATGCCTCTGACGAGGCAGCCCTGTATGCAGCCTGCGACGAGGTGGAGTCTGAGCTAAATGAGGCGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24369837|24370015 hsa-miR-611 0 0 1
chr14:24369837|24370015 hsa-miR-635 0 0 1
chr14:24369837|24370015 hsa-miR-541-5p 0 0 1
chr14:24369837|24370015 hsa-miR-541-3p 0 0 1
chr14:24369837|24370015 hsa-miR-942-5p 0 0 1
chr14:24369837|24370015 hsa-miR-942-3p 0 0 1
chr14:24369837|24370015 hsa-miR-1181 0 0 1
chr14:24369837|24370015 hsa-miR-1237-5p 0 0 1
chr14:24369837|24370015 hsa-miR-1237-3p 0 0 1
chr14:24369837|24370015 hsa-miR-1253 0 0 1
chr14:24369837|24370015 hsa-miR-654-5p 0 0 1
chr14:24369837|24370015 hsa-miR-3131 0 1 0
chr14:24369837|24370015 hsa-miR-3137 0 1 0
chr14:24369837|24370015 hsa-miR-3185 0 1 0
chr14:24369837|24370015 hsa-miR-3943 0 1 0
chr14:24369837|24370015 hsa-miR-4493 0 1 0
chr14:24369837|24370015 hsa-miR-4656 0 1 0
chr14:24369837|24370015 hsa-miR-4741 0 1 0
chr14:24369837|24370015 hsa-miR-149-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6854-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6762-3p 0 1 0
chr14:24369837|24370015 hsa-miR-5006-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6740-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6784-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6878-3p 0 1 0
chr14:24369837|24370015 hsa-miR-6501-5p 1 0 0
chr14:24369837|24370015 hsa-miR-4640-3p 0 1 0
chr14:24369837|24370015 hsa-miR-7106-3p 0 1 0
chr14:24369837|24370015 hsa-miR-6887-3p 0 1 0
chr14:24369837|24370015 hsa-miR-6801-5p 0 1 0
chr14:24369837|24370015 hsa-miR-2277-5p 1 0 0
chr14:24369837|24370015 hsa-miR-5004-5p 0 1 0
chr14:24369837|24370015 hsa-miR-5195-5p 1 0 0
chr14:24369837|24370015 hsa-miR-3620-3p 0 1 0
chr14:24369837|24370015 hsa-miR-4524b-3p 0 1 0
chr14:24369837|24370015 hsa-miR-6775-5p 1 0 0
chr14:24369837|24370015 hsa-miR-6774-5p 1 1 0
chr14:24369837|24370015 hsa-miR-3620-5p 0 1 0
chr14:24369837|24370015 hsa-miR-4685-5p 1 1 0
chr14:24369837|24370015 hsa-miR-6511b-5p 0 1 0
chr14:24369837|24370015 hsa-miR-3940-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6801-3p 0 1 0
chr14:24369837|24370015 hsa-miR-6810-3p 0 1 0
chr14:24369837|24370015 hsa-miR-3928-5p 0 1 0
chr14:24369837|24370015 hsa-miR-6811-5p 0 1 0
chr14:24369837|24370015 hsa-miR-340-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:24369837|24370015
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MSSWSFFSDASDEAALYAACDEVESELNEA
Nucleotide Sequence CTGTCCTCGTGGAGCTTCTTCTCCGATGCCTCTGACGAGGCAGCCCTGTATGCAGCCTGCGACGAGGTGGAGTCTGAGCTAAATGAGGCG

CircID chr14:24369837|24370015
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MGATEKQGARVGGPSSAQALAAAACPRGASSPMPLTRQPCMQPATRWSLS
Nucleotide Sequence TTGGGGGCTACAGAGAAGCAGGGGGCCAGGGTGGGGGGGCCTTCTTCAGCCCAAGCCCTGGCAGCAGCAGCCTGTCCTCGTGGAGCTTCTTCTCCGATGCCTCTGACGAGGCAGCCCTGTATGCAGCCTGCGACGAGGTGGAGTCTGAGCTAA

CircID chr14:24369837|24370015
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MHTGLPRQRHRRRSSTRTGCCCQGLG
Nucleotide Sequence CTGCATACAGGGCTGCCTCGTCAGAGGCATCGGAGAAGAAGCTCCACGAGGACAGGCTGCTGCTGCCAGGGCTTGGGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites