CircRNA Information

General Information
circRNA Basic Information
CircID chr14:24428951|24429117
Strand -
CircType exon
Host Gene ENSG00000139899.9;
Algorism CIRI2;
Sequence CCCTCCTGGGCCCACCCGGCCCCCAGGGCCAGAAGCACCAGAACCAAGGGCAGCCCGGGACTGTGTAGGGGACCTGGTAGCCAGTGTGGCTTGGCTCCCAACATGGCTGAGGGGCTCTGCAACCCACAAGTGCCCCGGTCTTCTGCCCCTCTTCTGTTTCCGCTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:24428951|24429117 hsa-miR-328-5p 0 0 1
chr14:24428951|24429117 hsa-miR-328-3p 0 0 1
chr14:24428951|24429117 hsa-miR-637 1 1 1
chr14:24428951|24429117 hsa-miR-659-5p 0 0 1
chr14:24428951|24429117 hsa-miR-659-3p 0 0 1
chr14:24428951|24429117 hsa-miR-298 0 1 1
chr14:24428951|24429117 hsa-miR-892b 0 0 1
chr14:24428951|24429117 hsa-miR-541-5p 0 0 1
chr14:24428951|24429117 hsa-miR-541-3p 0 0 1
chr14:24428951|24429117 hsa-miR-665 0 0 1
chr14:24428951|24429117 hsa-miR-920 0 0 1
chr14:24428951|24429117 hsa-miR-938 0 0 1
chr14:24428951|24429117 hsa-miR-1291 0 0 1
chr14:24428951|24429117 hsa-miR-1225-3p 0 1 1
chr14:24428951|24429117 hsa-miR-296-5p 0 0 1
chr14:24428951|24429117 hsa-miR-486-3p 0 0 1
chr14:24428951|24429117 hsa-miR-423-5p 1 1 1
chr14:24428951|24429117 hsa-miR-654-5p 0 1 1
chr14:24428951|24429117 hsa-miR-663a 1 0 0
chr14:24428951|24429117 hsa-miR-762 1 0 0
chr14:24428951|24429117 hsa-miR-1284 0 1 0
chr14:24428951|24429117 hsa-miR-1538 1 0 0
chr14:24428951|24429117 hsa-miR-3196 1 0 0
chr14:24428951|24429117 hsa-miR-4425 0 1 0
chr14:24428951|24429117 hsa-miR-4449 1 1 0
chr14:24428951|24429117 hsa-miR-4463 1 0 0
chr14:24428951|24429117 hsa-miR-1587 1 0 0
chr14:24428951|24429117 hsa-miR-4656 1 0 0
chr14:24428951|24429117 hsa-miR-4688 1 1 0
chr14:24428951|24429117 hsa-miR-4741 1 0 0
chr14:24428951|24429117 hsa-miR-5090 1 1 0
chr14:24428951|24429117 hsa-miR-5739 1 0 0
chr14:24428951|24429117 hsa-miR-6124 1 0 0
chr14:24428951|24429117 hsa-miR-4747-3p 1 0 0
chr14:24428951|24429117 hsa-miR-18a-3p 0 1 0
chr14:24428951|24429117 hsa-miR-504-3p 1 0 0
chr14:24428951|24429117 hsa-miR-4726-3p 1 0 0
chr14:24428951|24429117 hsa-miR-6089 1 0 0
chr14:24428951|24429117 hsa-miR-6873-5p 1 0 0
chr14:24428951|24429117 hsa-miR-505-5p 0 1 0
chr14:24428951|24429117 hsa-miR-6727-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6759-5p 0 1 0
chr14:24428951|24429117 hsa-miR-4655-5p 1 0 0
chr14:24428951|24429117 hsa-miR-197-5p 1 0 0
chr14:24428951|24429117 hsa-miR-3180-3p 1 0 0
chr14:24428951|24429117 hsa-miR-185-3p 0 1 0
chr14:24428951|24429117 hsa-miR-6827-5p 0 1 0
chr14:24428951|24429117 hsa-miR-3944-3p 1 0 0
chr14:24428951|24429117 hsa-miR-6784-5p 1 1 0
chr14:24428951|24429117 hsa-miR-6753-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6757-3p 0 1 0
chr14:24428951|24429117 hsa-miR-3677-3p 1 0 0
chr14:24428951|24429117 hsa-miR-4743-5p 0 1 0
chr14:24428951|24429117 hsa-miR-6500-3p 0 1 0
chr14:24428951|24429117 hsa-miR-6781-5p 0 1 0
chr14:24428951|24429117 hsa-miR-6877-5p 1 0 0
chr14:24428951|24429117 hsa-miR-887-5p 0 1 0
chr14:24428951|24429117 hsa-miR-7846-3p 1 0 0
chr14:24428951|24429117 hsa-miR-449b-3p 0 1 0
chr14:24428951|24429117 hsa-miR-548ao-3p 0 1 0
chr14:24428951|24429117 hsa-miR-4763-3p 1 0 0
chr14:24428951|24429117 hsa-miR-6787-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6816-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6775-5p 1 1 0
chr14:24428951|24429117 hsa-miR-3180 1 0 0
chr14:24428951|24429117 hsa-miR-6743-5p 1 1 0
chr14:24428951|24429117 hsa-miR-6756-5p 0 1 0
chr14:24428951|24429117 hsa-miR-6803-5p 1 0 0
chr14:24428951|24429117 hsa-miR-3620-5p 1 0 0
chr14:24428951|24429117 hsa-miR-10396b-5p 1 0 0
chr14:24428951|24429117 hsa-miR-1909-3p 1 0 0
chr14:24428951|24429117 hsa-miR-4745-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6738-5p 1 1 0
chr14:24428951|24429117 hsa-miR-675-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6846-5p 1 1 0
chr14:24428951|24429117 hsa-miR-6848-5p 1 1 0
chr14:24428951|24429117 hsa-miR-6858-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6773-5p 0 1 0
chr14:24428951|24429117 hsa-miR-3184-5p 1 1 0
chr14:24428951|24429117 hsa-miR-6849-5p 1 0 0
chr14:24428951|24429117 hsa-miR-5591-5p 1 1 0
chr14:24428951|24429117 hsa-miR-6724-5p 0 1 0
chr14:24428951|24429117 hsa-miR-6791-5p 0 1 0
chr14:24428951|24429117 hsa-miR-3085-3p 0 1 0
chr14:24428951|24429117 hsa-miR-6500-5p 1 0 0
chr14:24428951|24429117 hsa-miR-6874-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:24428951|24429117
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MCRGPGSQCGLAPNMAEGLCNPQVPRSSAPLLFPL
Nucleotide Sequence CTGTGTAGGGGACCTGGTAGCCAGTGTGGCTTGGCTCCCAACATGGCTGAGGGGCTCTGCAACCCACAAGTGCCCCGGTCTTCTGCCCCTCTTCTGTTTCCGCTC
CircID chr14:24428951|24429117
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MVASVAWLPTWLRGSATHKCPGLLPLFCFRS
Nucleotide Sequence CTGGTAGCCAGTGTGGCTTGGCTCCCAACATGGCTGAGGGGCTCTGCAACCCACAAGTGCCCCGGTCTTCTGCCCCTCTTCTGTTTCCGCTCC
CircID chr14:24428951|24429117
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MQSPSAMLGAKPHWLPGPLHSPGLPLVLVLLALGAGWAQE
Nucleotide Sequence TTGCAGAGCCCCTCAGCCATGTTGGGAGCCAAGCCACACTGGCTACCAGGTCCCCTACACAGTCCCGGGCTGCCCTTGGTTCTGGTGCTTCTGGCCCTGGGGGCCGGGTGGGCCCAGGAG
CircID chr14:24428951|24429117
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MWVAEPLSHVGSQATLATRSPTQSRAALGSGASGPGGRVGPGG
Nucleotide Sequence TTGTGGGTTGCAGAGCCCCTCAGCCATGTTGGGAGCCAAGCCACACTGGCTACCAGGTCCCCTACACAGTCCCGGGCTGCCCTTGGTTCTGGTGCTTCTGGCCCTGGGGGCCGGGTGGGCCCAGGAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab