CircRNA Information

General Information
circRNA Basic Information
CircID chr14:31343896|31345276
Strand -
CircType exon
Host Gene ENSG00000203546.7;ENSG00000129493.14;
Algorism find_circ;CIRI2;CIRC
Sequence ACCTGGGCATTACATTCTCTATCATTGATCATTGATTCTGCTGGCCCACTCTATTATGTGCATGTGGAACCTACCCTTTCTCTTATTATAATGTTGTTGTTAAATGTGCCTCCTACTCATGCTGAAGTTCACCAAAGCCTTGGTCGCTGTTTGAATGCCCTTATTACCACGTTAGGTCCAGAGCTACAAGGTAACAGTACTTCAATTTCTACCTTAAGGACTTCCTGTCTACTGGGTTGTGCAGTAATGCAAGATAACCCAGACTGCCTTGTTCAAGCTCAGGCCATCTCTTGCCTTCAGCAGCTTCATATGTTTGCTCCACGACATGTCAACTTGTCTAGCCTGGTTAGCTGCCTCTGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:31343896|31345276 hsa-miR-143-5p 0 1 1
chr14:31343896|31345276 hsa-miR-15a-3p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:31343896|31345276 NOP56 0 1 0
chr14:31343896|31345276 ELAVL1 1 4 0
chr14:31343896|31345276 PRPF8 0 2 1
chr14:31343896|31345276 UPF1 0 1 1
chr14:31343896|31345276 TNRC6A 1 0 0
chr14:31343896|31345276 FMR1 0 0 1
chr14:31343896|31345276 FUS 0 1 0
chr14:31343896|31345276 NOP58 1 0 0
chr14:31343896|31345276 U2AF2 8 8 2
chr14:31343896|31345276 SRSF9 1 0 0
chr14:31343896|31345276 DDX54 0 0 6
chr14:31343896|31345276 HNRNPL 1 0 0
chr14:31343896|31345276 HNRNPM 0 1 0
chr14:31343896|31345276 PTBP1 2 3 2
chr14:31343896|31345276 HNRNPC 1 2 0
chr14:31343896|31345276 ACIN1 0 3 1
chr14:31343896|31345276 SMNDC1 0 0 1
chr14:31343896|31345276 HNRNPA1 1 0 0
chr14:31343896|31345276 LIN28B 0 0 1
chr14:31343896|31345276 FXR1 0 0 3
chr14:31343896|31345276 FXR2 1 0 0
chr14:31343896|31345276 IGF2BP1 2 0 1
chr14:31343896|31345276 IGF2BP3 0 0 3
chr14:31343896|31345276 IGF2BP2 2 0 0
chr14:31343896|31345276 BUD13 0 0 1
chr14:31343896|31345276 KHSRP 0 1 0
chr14:31343896|31345276 RBM47 1 1 0
chr14:31343896|31345276 DDX42 0 1 0
chr14:31343896|31345276 TIA1 1 1 0
chr14:31343896|31345276 TIAL1 0 1 1
chr14:31343896|31345276 FBL 0 0 1
chr14:31343896|31345276 EIF4A3 1 2 3
chr14:31343896|31345276 AGO2 1 0 3