CircRNA Information

General Information
circRNA Basic Information
CircID chr14:35403690|35404437
Strand -
CircType exon
Host Gene ENSG00000100906.9;
Algorism CIRI2;
Sequence CTGCTGCAGGTTGTTCTGGAAGTTGAGGAAGGCCAGGTCTCCCTTCACCTGGCGGATCACTTCCATGGTCAGTGCCTTTTCTTCATGGATGATGGCCAAGTGCAGGAACGAGTCCCCGTCCTCGGTGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:35403690|35404437 hsa-miR-107 0 0 1
chr14:35403690|35404437 hsa-miR-506-5p 0 0 1
chr14:35403690|35404437 hsa-miR-506-3p 0 0 1
chr14:35403690|35404437 hsa-miR-588 0 0 1
chr14:35403690|35404437 hsa-miR-591 0 0 1
chr14:35403690|35404437 hsa-miR-611 0 0 1
chr14:35403690|35404437 hsa-miR-631 1 1 1
chr14:35403690|35404437 hsa-miR-125a-3p 0 0 1
chr14:35403690|35404437 hsa-miR-769-5p 0 0 1
chr14:35403690|35404437 hsa-miR-1184 0 0 1
chr14:35403690|35404437 hsa-miR-525-5p 0 0 1
chr14:35403690|35404437 hsa-miR-520a-5p 0 0 1
chr14:35403690|35404437 hsa-miR-103 0 0 1
chr14:35403690|35404437 hsa-miR-124 0 0 1
chr14:35403690|35404437 hsa-miR-1245 0 0 1
chr14:35403690|35404437 hsa-miR-762 1 0 0
chr14:35403690|35404437 hsa-miR-3131 1 0 0
chr14:35403690|35404437 hsa-miR-3142 0 1 0
chr14:35403690|35404437 hsa-miR-548an 0 1 0
chr14:35403690|35404437 hsa-miR-6084 0 1 0
chr14:35403690|35404437 hsa-miR-8060 0 1 0
chr14:35403690|35404437 hsa-miR-6894-5p 1 0 0
chr14:35403690|35404437 hsa-miR-6089 1 0 0
chr14:35403690|35404437 hsa-miR-4709-3p 0 1 0
chr14:35403690|35404437 hsa-miR-191-3p 1 1 0
chr14:35403690|35404437 hsa-miR-1908-5p 1 0 0
chr14:35403690|35404437 hsa-miR-3191-3p 1 0 0
chr14:35403690|35404437 hsa-miR-4652-5p 0 1 0
chr14:35403690|35404437 hsa-miR-3180-5p 0 1 0
chr14:35403690|35404437 hsa-miR-670-3p 0 1 0
chr14:35403690|35404437 hsa-miR-4529-5p 0 1 0
chr14:35403690|35404437 hsa-miR-6501-3p 0 1 0
chr14:35403690|35404437 hsa-miR-5197-3p 0 1 0
chr14:35403690|35404437 hsa-miR-589-3p 0 1 0
chr14:35403690|35404437 hsa-miR-431-5p 1 0 0
chr14:35403690|35404437 hsa-miR-4749-5p 1 0 0
chr14:35403690|35404437 hsa-miR-6848-5p 1 0 0
chr14:35403690|35404437 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:35403690|35404437
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence LLQVVLEVEEGQVSLHLADHFHGQCLFFMDDGQVQERVPVLGE
Nucleotide Sequence CTGCTGCAGGTTGTTCTGGAAGTTGAGGAAGGCCAGGTCTCCCTTCACCTGGCGGATCACTTCCATGGTCAGTGCCTTTTCTTCATGGATGATGGCCAAGTGCAGGAACGAGTCCCCGTCCTCGGTGAG

CircID chr14:35403690|35404437
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MFWKLRKARSPFTWRITSMVSAFSSWMMAKCRNESPSSV
Nucleotide Sequence TTGTTCTGGAAGTTGAGGAAGGCCAGGTCTCCCTTCACCTGGCGGATCACTTCCATGGTCAGTGCCTTTTCTTCATGGATGATGGCCAAGTGCAGGAACGAGTCCCCGTCCTCGGTG

CircID chr14:35403690|35404437
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ
Nucleotide Sequence CTGCACTTGGCCATCATCCATGAAGAAAAGGCACTGACCATGGAAGTGATCCGCCAGGTGAAGGGAGACCTGGCCTTCCTCAACTTCCAGAACAACCTGCAGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites