CircRNA Information

General Information
circRNA Basic Information
CircID chr14:35705029|35705184
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TATGGACTTTAGCAATACTGTATCAATATGAGCTTGTTAATTGTAGCAAATGTACCATGCTAATACAAGATGTTAATAATTGGGGAAACTGGTAGGGAGGGGGAAAGGGATGTATGGAAACTCTTTGTAGTTGACACTCATTTTTTATCTGTAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:35705029|35705184 hsa-miR-204-5p 0 0 1
chr14:35705029|35705184 hsa-miR-204-3p 0 0 1
chr14:35705029|35705184 hsa-miR-211-5p 0 0 1
chr14:35705029|35705184 hsa-miR-211-3p 0 0 1
chr14:35705029|35705184 hsa-miR-221-5p 0 0 1
chr14:35705029|35705184 hsa-miR-221-3p 0 0 1
chr14:35705029|35705184 hsa-miR-222-5p 0 0 1
chr14:35705029|35705184 hsa-miR-222-3p 0 0 1
chr14:35705029|35705184 hsa-miR-137-5p 0 0 1
chr14:35705029|35705184 hsa-miR-137-3p 0 0 1
chr14:35705029|35705184 hsa-miR-144-5p 0 0 1
chr14:35705029|35705184 hsa-miR-144-3p 0 0 1
chr14:35705029|35705184 hsa-miR-505-5p 0 0 1
chr14:35705029|35705184 hsa-miR-505-3p 0 0 1
chr14:35705029|35705184 hsa-miR-577 0 0 1
chr14:35705029|35705184 hsa-miR-587 0 0 1
chr14:35705029|35705184 hsa-miR-643 0 0 1
chr14:35705029|35705184 hsa-miR-944 0 0 1
chr14:35705029|35705184 hsa-miR-1279 0 0 1
chr14:35705029|35705184 hsa-miR-1283 0 0 1
chr14:35705029|35705184 hsa-miR-574-5p 0 0 1
chr14:35705029|35705184 hsa-miR-188-5p 0 0 1
chr14:35705029|35705184 hsa-miR-524-5p 0 0 1
chr14:35705029|35705184 hsa-miR-520d-5p 0 0 1
chr14:35705029|35705184 hsa-miR-101 0 0 1
chr14:35705029|35705184 hsa-miR-1470 1 0 0
chr14:35705029|35705184 hsa-miR-3659 0 1 0
chr14:35705029|35705184 hsa-miR-4469 1 0 0
chr14:35705029|35705184 hsa-miR-4658 0 1 0
chr14:35705029|35705184 hsa-miR-5193 1 0 0
chr14:35705029|35705184 hsa-miR-6749-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6836-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6892-3p 1 0 0
chr14:35705029|35705184 hsa-miR-145-5p 0 1 0
chr14:35705029|35705184 hsa-miR-7110-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6832-3p 1 0 0
chr14:35705029|35705184 hsa-miR-4713-5p 1 0 0
chr14:35705029|35705184 hsa-miR-1247-5p 1 0 0
chr14:35705029|35705184 hsa-miR-7113-3p 1 0 0
chr14:35705029|35705184 hsa-miR-4667-3p 1 0 0
chr14:35705029|35705184 hsa-miR-1236-3p 1 0 0
chr14:35705029|35705184 hsa-miR-3180-5p 1 0 0
chr14:35705029|35705184 hsa-miR-6867-3p 0 1 0
chr14:35705029|35705184 hsa-miR-6887-3p 0 1 0
chr14:35705029|35705184 hsa-miR-4749-3p 1 0 0
chr14:35705029|35705184 hsa-miR-3124-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6748-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6851-3p 1 0 0
chr14:35705029|35705184 hsa-miR-3173-5p 1 0 0
chr14:35705029|35705184 hsa-miR-6729-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6800-3p 1 0 0
chr14:35705029|35705184 hsa-miR-3162-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6731-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6866-3p 0 1 0
chr14:35705029|35705184 hsa-miR-6790-5p 0 1 0
chr14:35705029|35705184 hsa-miR-6756-3p 1 0 0
chr14:35705029|35705184 hsa-miR-4723-3p 1 0 0
chr14:35705029|35705184 hsa-miR-5006-3p 1 0 0
chr14:35705029|35705184 hsa-miR-6827-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:35705029|35705184
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MLIIGETGREGERDVWKLFVVDTHFLSVN
Nucleotide Sequence ATGTTAATAATTGGGGAAACTGGTAGGGAGGGGGAAAGGGATGTATGGAAACTCTTTGTAGTTGACACTCATTTTTTATCTGTAAAC
CircID chr14:35705029|35705184
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MYQYELVNCSKCTMLIQDVNNWGNW
Nucleotide Sequence CTGTATCAATATGAGCTTGTTAATTGTAGCAAATGTACCATGCTAATACAAGATGTTAATAATTGGGGAAACTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab