CircRNA Information

General Information
circRNA Basic Information
CircID chr14:36516769|36517044
Strand +
CircType exon
Host Gene ENSG00000136352.16;
Algorism CIRI2;
Sequence CAAGCGCATCCAATCTCAAGGAATCTTTAAGCAGAGAAGGGCATAAAACAGCTTTGGGGTGTCTTTTTTTGGTGATTCAAATGGGTTTTCCACGCTAGGGCGGGGCACAGATTGGAGAGGGCTCTGTGCTGACATGGCTCTGGACTCTAAAGACCAAACTTCACTCTGGGCACACTCTGCCAGCAAAGAGGACTCGCTTGTAAATACCAGGATTTTTTTTTTTTTTTGAAGGGAGGACGGGAGCTGGGGAGAGGAAAGAGTCTTCAACATAACCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:36516769|36517044 hsa-miR-198 0 1 1
chr14:36516769|36517044 hsa-miR-320a-5p 0 0 1
chr14:36516769|36517044 hsa-miR-320a-3p 0 0 1
chr14:36516769|36517044 hsa-miR-133b 0 0 1
chr14:36516769|36517044 hsa-miR-648 0 0 1
chr14:36516769|36517044 hsa-miR-653-5p 0 0 1
chr14:36516769|36517044 hsa-miR-653-3p 0 0 1
chr14:36516769|36517044 hsa-miR-660-5p 0 0 1
chr14:36516769|36517044 hsa-miR-660-3p 0 0 1
chr14:36516769|36517044 hsa-miR-938 0 0 1
chr14:36516769|36517044 hsa-miR-942-5p 0 0 1
chr14:36516769|36517044 hsa-miR-942-3p 0 0 1
chr14:36516769|36517044 hsa-miR-1238-5p 0 0 1
chr14:36516769|36517044 hsa-miR-1238-3p 0 0 1
chr14:36516769|36517044 hsa-miR-1303 0 0 1
chr14:36516769|36517044 hsa-miR-1247-5p 0 0 1
chr14:36516769|36517044 hsa-miR-1247-3p 0 0 1
chr14:36516769|36517044 hsa-miR-574-5p 0 1 1
chr14:36516769|36517044 hsa-miR-525-5p 0 0 1
chr14:36516769|36517044 hsa-miR-502-5p 0 0 1
chr14:36516769|36517044 hsa-miR-520a-5p 0 0 1
chr14:36516769|36517044 hsa-miR-320b 0 0 1
chr14:36516769|36517044 hsa-miR-320c 0 0 1
chr14:36516769|36517044 hsa-miR-320d 0 0 1
chr14:36516769|36517044 hsa-miR-491-3p 0 0 1
chr14:36516769|36517044 hsa-miR-515-5p 0 0 1
chr14:36516769|36517044 hsa-miR-548c-3p 0 0 1
chr14:36516769|36517044 hsa-miR-1233 0 0 1
chr14:36516769|36517044 hsa-miR-133a 0 0 1
chr14:36516769|36517044 hsa-miR-2113 0 1 0
chr14:36516769|36517044 hsa-miR-1233-3p 0 1 0
chr14:36516769|36517044 hsa-miR-6892-3p 0 1 0
chr14:36516769|36517044 hsa-miR-6875-3p 1 0 0
chr14:36516769|36517044 hsa-miR-7110-3p 0 1 0
chr14:36516769|36517044 hsa-miR-6787-3p 1 1 0
chr14:36516769|36517044 hsa-miR-6845-3p 1 0 0
chr14:36516769|36517044 hsa-miR-877-3p 1 0 0
chr14:36516769|36517044 hsa-miR-6853-5p 0 1 0
chr14:36516769|36517044 hsa-miR-6763-3p 1 0 0
chr14:36516769|36517044 hsa-miR-7111-3p 1 1 0
chr14:36516769|36517044 hsa-miR-6830-3p 0 1 0
chr14:36516769|36517044 hsa-miR-6736-3p 0 1 0
chr14:36516769|36517044 hsa-miR-6889-3p 0 1 0
chr14:36516769|36517044 hsa-miR-1914-5p 1 0 0
chr14:36516769|36517044 hsa-miR-6886-3p 0 1 0
chr14:36516769|36517044 hsa-miR-3124-3p 0 1 0
chr14:36516769|36517044 hsa-miR-130b-5p 0 1 0
chr14:36516769|36517044 hsa-miR-642a-5p 0 1 0
chr14:36516769|36517044 hsa-miR-6831-5p 1 0 0
chr14:36516769|36517044 hsa-miR-2682-3p 1 0 0
chr14:36516769|36517044 hsa-miR-9851-5p 0 1 0
chr14:36516769|36517044 hsa-miR-6529-5p 1 0 0
chr14:36516769|36517044 hsa-miR-6810-3p 1 0 0
chr14:36516769|36517044 hsa-miR-3059-5p 0 1 0
chr14:36516769|36517044 hsa-miR-4723-3p 1 0 0
chr14:36516769|36517044 hsa-miR-483-3p 1 0 0
chr14:36516769|36517044 hsa-miR-6891-3p 1 0 0
chr14:36516769|36517044 hsa-miR-6833-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:36516769|36517044
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MGTLCQQRGLACKYQDFFFFLKGGRELGRGKSLQHNP
Nucleotide Sequence CTGGGCACACTCTGCCAGCAAAGAGGACTCGCTTGTAAATACCAGGATTTTTTTTTTTTTTTGAAGGGAGGACGGGAGCTGGGGAGAGGAAAGAGTCTTCAACATAACCCA

CircID chr14:36516769|36517044
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MALDSKDQTSLWAHSASKEDSLVNTRIFFFF
Nucleotide Sequence ATGGCTCTGGACTCTAAAGACCAAACTTCACTCTGGGCACACTCTGCCAGCAAAGAGGACTCGCTTGTAAATACCAGGATTTTTTTTTTTTTTTGA

CircID chr14:36516769|36517044
ORF Type ORF3
Protein Length 84
Nucleotide Length 255
Protein Sequence MLKTLSSPQLPSSLQKKKKILVFTSESSLLAECAQSEVWSLESRAMSAQSPLQSVPRPSVENPFESPKKDTPKLFYALLCLKIP
Nucleotide Sequence ATGTTGAAGACTCTTTCCTCTCCCCAGCTCCCGTCCTCCCTTCAAAAAAAAAAAAAAATCCTGGTATTTACAAGCGAGTCCTCTTTGCTGGCAGAGTGTGCCCAGAGTGAAGTTTGGTCTTTAGAGTCCAGAGCCATGTCAGCACAGAGCCCTCTCCAATCTGTGCCCCGCCCTAGCGTGGAAAACCCATTTGAATCACCAAAAAAAGACACCCCAAAGCTGTTTTATGCCCTTCTCTGCTTAAAGATTCCTTGA

CircID chr14:36516769|36517044
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MCPALAWKTHLNHQKKTPQSCFMPFSA
Nucleotide Sequence CTGTGCCCCGCCCTAGCGTGGAAAACCCATTTGAATCACCAAAAAAAGACACCCCAAAGCTGTTTTATGCCCTTCTCTGCTTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites