CircNet

General Information

circRNA Basic Information

CircID	chr14:39154211\|39158402
Strand	-
CircType	exon
Host Gene	ENSG00000182400.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTTACAAAAGATACTGCAAGGTTCAAGGATGAGTTAGATATCATGAAGTTCATTTGTAAAGATTTTTGGACTACGGTATTCAAGAAACAAATCGACAATCTAAGGACAAATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAGATGTCTGCAGGAAAACAGTATTTAGAACATGCATCTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr14:39154211\|39158402	hsa-miR-217-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-217-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-144-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-144-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-346	0	0	1
chr14:39154211\|39158402	hsa-miR-510-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-510-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-570-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-570-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-579-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-579-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-632	0	0	1
chr14:39154211\|39158402	hsa-miR-1205	0	0	1
chr14:39154211\|39158402	hsa-miR-1286	0	0	1
chr14:39154211\|39158402	hsa-miR-1255a	0	0	1
chr14:39154211\|39158402	hsa-miR-512-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-1184	0	0	1
chr14:39154211\|39158402	hsa-miR-654-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-524-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-509-3-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-509-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-513a-3p	0	0	1
chr14:39154211\|39158402	hsa-miR-520d-5p	0	0	1
chr14:39154211\|39158402	hsa-miR-1255b	0	0	1
chr14:39154211\|39158402	hsa-miR-1269	0	0	1
chr14:39154211\|39158402	hsa-miR-1290	1	0	0
chr14:39154211\|39158402	hsa-miR-12128	1	0	0
chr14:39154211\|39158402	hsa-miR-5088-5p	1	0	0
chr14:39154211\|39158402	hsa-miR-3127-5p	0	1	0
chr14:39154211\|39158402	hsa-miR-2681-3p	0	1	0
chr14:39154211\|39158402	hsa-miR-2276-3p	0	1	0
chr14:39154211\|39158402	hsa-miR-6722-3p	1	0	0
chr14:39154211\|39158402	hsa-miR-200c-3p	0	1	0
chr14:39154211\|39158402	hsa-miR-7-1-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr14:39154211\|39158402
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMSAGKQYLEHASK
Nucleotide Sequence	ATGAAGTTCATTTGTAAAGATTTTTGGACTACGGTATTCAAGAAACAAATCGACAATCTAAGGACAAATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAGATGTCTGCAGGAAAACAGTATTTAGAACATGCATCTAAG

CircID	chr14:39154211\|39158402
ORF Type	ORF1
Protein Length	26
Nucleotide Length	81
Protein Sequence	MFSCRHLSKQAKFVVLKYIDALMICP
Nucleotide Sequence	CTGTTTTCCTGCAGACATCTGAGTAAGCAGGCGAAATTTGTTGTCCTGAAGTACATAGATGCCCTGATGATTTGTCCTTAG

CircID	chr14:39154211\|39158402
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MSICFLNTVVQKSLQMNFMISNSSLNLAVSFVN
Nucleotide Sequence	TTGTCGATTTGTTTCTTGAATACCGTAGTCCAAAAATCTTTACAAATGAACTTCATGATATCTAACTCATCCTTGAACCTTGCAGTATCTTTTGTAAAC

CircID	chr14:39154211\|39158402
ORF Type	ORF3
Protein Length	44
Nucleotide Length	135
Protein Sequence	MDYGIQETNRQSKDKSSGHLCTSGQQISPAYSDVCRKTVFRTCI
Nucleotide Sequence	TTGGACTACGGTATTCAAGAAACAAATCGACAATCTAAGGACAAATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAGATGTCTGCAGGAAAACAGTATTTAGAACATGCATCTAA

CircID	chr14:39154211\|39158402
ORF Type	ORF4
Protein Length	53
Nucleotide Length	159
Protein Sequence	MKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMSAGKQYLEHASK
Nucleotide Sequence	ATGAAGTTCATTTGTAAAGATTTTTGGACTACGGTATTCAAGAAACAAATCGACAATCTAAGGACAAATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAGATGTCTGCAGGAAAACAGTATTTAGAACATGCATCTAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr14:39154211\|39158402	NOP56	3	1	0
chr14:39154211\|39158402	ELAVL1	8	1	2
chr14:39154211\|39158402	NUMA1	1	0	0
chr14:39154211\|39158402	SF3B4	1	0	0
chr14:39154211\|39158402	FAM120A	2	0	0
chr14:39154211\|39158402	FKBP4	0	0	1
chr14:39154211\|39158402	PRPF8	2	1	0
chr14:39154211\|39158402	UPF1	2	1	0
chr14:39154211\|39158402	TAF15	3	0	0
chr14:39154211\|39158402	FMR1	1	0	1
chr14:39154211\|39158402	CPSF6	1	0	1
chr14:39154211\|39158402	FUS	1	0	0
chr14:39154211\|39158402	SRSF7	1	0	0
chr14:39154211\|39158402	SRSF1	2	0	2
chr14:39154211\|39158402	NOP58	1	0	2
chr14:39154211\|39158402	DHX9	0	1	0
chr14:39154211\|39158402	U2AF1	5	0	1
chr14:39154211\|39158402	U2AF2	21	2	3
chr14:39154211\|39158402	HNRNPU	1	0	0
chr14:39154211\|39158402	DDX54	0	1	6
chr14:39154211\|39158402	PCBP2	1	0	0
chr14:39154211\|39158402	HNRNPA2B1	4	0	0
chr14:39154211\|39158402	SF3A3	2	0	0
chr14:39154211\|39158402	HNRNPL	0	2	0
chr14:39154211\|39158402	PTBP1	0	0	1
chr14:39154211\|39158402	HNRNPC	0	4	0
chr14:39154211\|39158402	HNRNPD	0	1	0
chr14:39154211\|39158402	TRA2A	0	0	1
chr14:39154211\|39158402	ZNF184	1	0	1
chr14:39154211\|39158402	HNRNPA1	5	0	0
chr14:39154211\|39158402	KHSRP	4	0	0
chr14:39154211\|39158402	AUH	1	0	0
chr14:39154211\|39158402	ACIN1	0	0	1
chr14:39154211\|39158402	RANGAP1	1	0	0
chr14:39154211\|39158402	BCCIP	2	0	0
chr14:39154211\|39158402	SND1	1	0	1
chr14:39154211\|39158402	IGF2BP1	1	0	1
chr14:39154211\|39158402	GTF2F1	2	0	0
chr14:39154211\|39158402	IGF2BP3	1	0	1
chr14:39154211\|39158402	IGF2BP2	1	0	4
chr14:39154211\|39158402	MBNL2	0	1	0
chr14:39154211\|39158402	HNRNPUL1	1	0	0
chr14:39154211\|39158402	TARDBP	1	0	1
chr14:39154211\|39158402	BUD13	3	0	1
chr14:39154211\|39158402	RBFOX2	1	0	0
chr14:39154211\|39158402	CNBP	0	1	0
chr14:39154211\|39158402	SLTM	1	0	0
chr14:39154211\|39158402	DDX42	1	0	0
chr14:39154211\|39158402	CSTF2T	3	0	2
chr14:39154211\|39158402	SAFB2	1	0	0
chr14:39154211\|39158402	RBM27	0	0	1
chr14:39154211\|39158402	RBM22	0	1	0
chr14:39154211\|39158402	AGO2	1	1	0
chr14:39154211\|39158402	EIF4A3	0	1	2
chr14:39154211\|39158402	FBL	1	1	4

CircRNA Information