CircRNA Information

General Information
circRNA Basic Information
CircID chr14:39180706|39180822
Strand +
CircType exon
Host Gene ENSG00000100941.7;
Algorism CIRI2;
Sequence CTCAGTTTCCTCCTCCATCTTAACCTCCATTTCCTGTTTTTGTTCTTCCTCCTCCTGTTCTTTCTCTGCATCACTATGAACAATCGCTATTTCCTTTTCCTCTTCCTCTCCTGCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:39180706|39180822 hsa-miR-376b-5p 0 0 1
chr14:39180706|39180822 hsa-miR-376b-3p 0 0 1
chr14:39180706|39180822 hsa-miR-765 1 0 1
chr14:39180706|39180822 hsa-miR-1206 0 0 1
chr14:39180706|39180822 hsa-miR-376a 0 0 1
chr14:39180706|39180822 hsa-miR-1245 0 0 1
chr14:39180706|39180822 hsa-miR-198 1 0 0
chr14:39180706|39180822 hsa-miR-650 1 0 0
chr14:39180706|39180822 hsa-miR-921 1 0 0
chr14:39180706|39180822 hsa-miR-936 1 0 0
chr14:39180706|39180822 hsa-miR-3125 1 0 0
chr14:39180706|39180822 hsa-miR-3154 1 0 0
chr14:39180706|39180822 hsa-miR-4306 1 0 0
chr14:39180706|39180822 hsa-miR-4271 1 0 0
chr14:39180706|39180822 hsa-miR-3652 1 0 0
chr14:39180706|39180822 hsa-miR-3916 1 0 0
chr14:39180706|39180822 hsa-miR-4436a 1 0 0
chr14:39180706|39180822 hsa-miR-4476 1 0 0
chr14:39180706|39180822 hsa-miR-2392 1 0 0
chr14:39180706|39180822 hsa-miR-4510 1 0 0
chr14:39180706|39180822 hsa-miR-4534 1 0 0
chr14:39180706|39180822 hsa-miR-4644 1 0 0
chr14:39180706|39180822 hsa-miR-4689 1 0 0
chr14:39180706|39180822 hsa-miR-4739 1 0 0
chr14:39180706|39180822 hsa-miR-4748 1 0 0
chr14:39180706|39180822 hsa-miR-4779 1 0 0
chr14:39180706|39180822 hsa-miR-5093 1 0 0
chr14:39180706|39180822 hsa-miR-5191 1 0 0
chr14:39180706|39180822 hsa-miR-5192 1 0 0
chr14:39180706|39180822 hsa-miR-5698 1 0 0
chr14:39180706|39180822 hsa-miR-6086 1 0 0
chr14:39180706|39180822 hsa-miR-6088 1 0 0
chr14:39180706|39180822 hsa-miR-6124 1 0 0
chr14:39180706|39180822 hsa-miR-6127 1 0 0
chr14:39180706|39180822 hsa-miR-6133 1 0 0
chr14:39180706|39180822 hsa-miR-6165 1 0 0
chr14:39180706|39180822 hsa-miR-8085 1 0 0
chr14:39180706|39180822 hsa-miR-12114 1 0 0
chr14:39180706|39180822 hsa-miR-12115 1 0 0
chr14:39180706|39180822 hsa-miR-12118 1 0 0
chr14:39180706|39180822 hsa-miR-4433b-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6734-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4433a-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6765-5p 1 0 0
chr14:39180706|39180822 hsa-miR-7106-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6825-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6894-5p 1 0 0
chr14:39180706|39180822 hsa-miR-125a-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6510-5p 1 0 0
chr14:39180706|39180822 hsa-miR-5187-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4768-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6515-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6880-5p 1 0 0
chr14:39180706|39180822 hsa-miR-7847-3p 1 0 0
chr14:39180706|39180822 hsa-miR-4695-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6746-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4709-3p 1 0 0
chr14:39180706|39180822 hsa-miR-4722-5p 1 0 0
chr14:39180706|39180822 hsa-miR-197-5p 1 0 0
chr14:39180706|39180822 hsa-miR-3605-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6716-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6871-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6798-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6760-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6881-5p 1 0 0
chr14:39180706|39180822 hsa-miR-2467-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6782-5p 1 0 0
chr14:39180706|39180822 hsa-miR-185-5p 1 0 0
chr14:39180706|39180822 hsa-miR-1908-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4690-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4732-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6847-5p 1 0 0
chr14:39180706|39180822 hsa-miR-3202 1 0 0
chr14:39180706|39180822 hsa-miR-3158-5p 1 0 0
chr14:39180706|39180822 hsa-miR-5010-5p 1 0 0
chr14:39180706|39180822 hsa-miR-664b-5p 1 0 0
chr14:39180706|39180822 hsa-miR-423-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6826-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6832-5p 1 0 0
chr14:39180706|39180822 hsa-miR-302c-5p 1 0 0
chr14:39180706|39180822 hsa-miR-1207-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4763-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6778-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6787-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6870-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6893-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6803-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6851-5p 1 0 0
chr14:39180706|39180822 hsa-miR-11181-3p 1 0 0
chr14:39180706|39180822 hsa-miR-1249-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6722-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6751-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6797-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6808-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6879-5p 1 0 0
chr14:39180706|39180822 hsa-miR-7111-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6780b-5p 1 0 0
chr14:39180706|39180822 hsa-miR-10526-3p 1 0 0
chr14:39180706|39180822 hsa-miR-4649-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6729-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6738-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6794-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6858-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4436b-3p 1 0 0
chr14:39180706|39180822 hsa-miR-4723-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6831-5p 1 0 0
chr14:39180706|39180822 hsa-miR-30c-1-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6731-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6856-5p 1 0 0
chr14:39180706|39180822 hsa-miR-6855-5p 1 0 0
chr14:39180706|39180822 hsa-miR-3173-3p 1 0 0
chr14:39180706|39180822 hsa-miR-6891-5p 1 0 0
chr14:39180706|39180822 hsa-miR-4716-3p 1 0 0
chr14:39180706|39180822 hsa-miR-4667-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:39180706|39180822
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MFLFFLLLFFLCITMNNRYFLFLFLSCF
Nucleotide Sequence CTGTTTTTGTTCTTCCTCCTCCTGTTCTTTCTCTGCATCACTATGAACAATCGCTATTTCCTTTTCCTCTTCCTCTCCTGCTTC
CircID chr14:39180706|39180822
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MFIVMQRKNRRRKNKNRKWRLRWRRKL
Nucleotide Sequence TTGTTCATAGTGATGCAGAGAAAGAACAGGAGGAGGAAGAACAAAAACAGGAAATGGAGGTTAAGATGGAGGAGGAAACTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab