CircRNA Information

General Information
circRNA Basic Information
CircID chr14:39181446|39181656
Strand +
CircType exon
Host Gene ENSG00000100941.7;
Algorism CIRI2;
Sequence GCTCCTTCTGTGCTTTCTATCTCTATTATGTCCCCGGCCCCTACTCCGACTTCTACTCTCACTACTACTACTAGTGCTACTGCTACTATCTCTGCTGCTGCTGCCACTTGTACTGGAGCTGCTACTGGAACTACTGCGACTGCTACTACTTCCACTGCTGGAACTACTTCCACTGCTGCTACTGGTTGAACTGCTACTAGAACTGCTACTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:39181446|39181656 hsa-miR-15a-5p 0 0 1
chr14:39181446|39181656 hsa-miR-15a-3p 0 0 1
chr14:39181446|39181656 hsa-miR-15b-5p 0 0 1
chr14:39181446|39181656 hsa-miR-15b-3p 0 0 1
chr14:39181446|39181656 hsa-miR-195-5p 0 0 1
chr14:39181446|39181656 hsa-miR-195-3p 0 0 1
chr14:39181446|39181656 hsa-miR-325 0 1 1
chr14:39181446|39181656 hsa-miR-424-5p 0 0 1
chr14:39181446|39181656 hsa-miR-424-3p 0 0 1
chr14:39181446|39181656 hsa-miR-497-5p 0 0 1
chr14:39181446|39181656 hsa-miR-497-3p 0 0 1
chr14:39181446|39181656 hsa-miR-503-5p 0 0 1
chr14:39181446|39181656 hsa-miR-503-3p 0 0 1
chr14:39181446|39181656 hsa-miR-646 0 0 1
chr14:39181446|39181656 hsa-miR-921 1 1 1
chr14:39181446|39181656 hsa-miR-922 0 1 1
chr14:39181446|39181656 hsa-miR-145-5p 0 0 1
chr14:39181446|39181656 hsa-miR-770-5p 0 1 1
chr14:39181446|39181656 hsa-miR-885-3p 1 0 1
chr14:39181446|39181656 hsa-miR-628-3p 1 0 1
chr14:39181446|39181656 hsa-miR-1244 0 0 1
chr14:39181446|39181656 hsa-miR-338-3p 0 0 1
chr14:39181446|39181656 hsa-miR-199b-3p 0 0 1
chr14:39181446|39181656 hsa-miR-199a-3p 0 0 1
chr14:39181446|39181656 hsa-miR-16 0 0 1
chr14:39181446|39181656 hsa-miR-637 1 0 0
chr14:39181446|39181656 hsa-miR-762 1 0 0
chr14:39181446|39181656 hsa-miR-298 1 0 0
chr14:39181446|39181656 hsa-miR-936 1 0 0
chr14:39181446|39181656 hsa-miR-1183 0 1 0
chr14:39181446|39181656 hsa-miR-3132 1 0 0
chr14:39181446|39181656 hsa-miR-3154 1 0 0
chr14:39181446|39181656 hsa-miR-3196 1 0 0
chr14:39181446|39181656 hsa-miR-4277 0 1 0
chr14:39181446|39181656 hsa-miR-3923 1 0 0
chr14:39181446|39181656 hsa-miR-3937 1 0 0
chr14:39181446|39181656 hsa-miR-4447 1 0 0
chr14:39181446|39181656 hsa-miR-4488 1 0 0
chr14:39181446|39181656 hsa-miR-4489 1 0 0
chr14:39181446|39181656 hsa-miR-4492 1 0 0
chr14:39181446|39181656 hsa-miR-4498 1 0 0
chr14:39181446|39181656 hsa-miR-4508 1 0 0
chr14:39181446|39181656 hsa-miR-4510 1 0 0
chr14:39181446|39181656 hsa-miR-4516 1 0 0
chr14:39181446|39181656 hsa-miR-4519 0 1 0
chr14:39181446|39181656 hsa-miR-1587 1 0 0
chr14:39181446|39181656 hsa-miR-3960 1 0 0
chr14:39181446|39181656 hsa-miR-4651 1 0 0
chr14:39181446|39181656 hsa-miR-4656 1 0 0
chr14:39181446|39181656 hsa-miR-4660 1 1 0
chr14:39181446|39181656 hsa-miR-4688 1 0 0
chr14:39181446|39181656 hsa-miR-5703 1 0 0
chr14:39181446|39181656 hsa-miR-5787 1 0 0
chr14:39181446|39181656 hsa-miR-6085 1 0 0
chr14:39181446|39181656 hsa-miR-6088 1 0 0
chr14:39181446|39181656 hsa-miR-6127 1 0 0
chr14:39181446|39181656 hsa-miR-7704 1 0 0
chr14:39181446|39181656 hsa-miR-8089 1 0 0
chr14:39181446|39181656 hsa-miR-12115 1 0 0
chr14:39181446|39181656 hsa-miR-203a-5p 0 1 0
chr14:39181446|39181656 hsa-miR-222-5p 0 1 0
chr14:39181446|39181656 hsa-miR-4433b-3p 1 0 0
chr14:39181446|39181656 hsa-miR-128-1-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6734-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4731-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4433a-3p 1 0 0
chr14:39181446|39181656 hsa-miR-125b-1-3p 1 0 0
chr14:39181446|39181656 hsa-miR-6825-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6510-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6089 1 0 0
chr14:39181446|39181656 hsa-miR-4695-5p 1 0 0
chr14:39181446|39181656 hsa-miR-3677-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6820-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6727-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6721-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4655-5p 1 0 0
chr14:39181446|39181656 hsa-miR-197-5p 1 1 0
chr14:39181446|39181656 hsa-miR-432-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6871-5p 1 0 0
chr14:39181446|39181656 hsa-miR-3190-3p 1 1 0
chr14:39181446|39181656 hsa-miR-6805-5p 1 0 0
chr14:39181446|39181656 hsa-miR-486-3p 1 0 0
chr14:39181446|39181656 hsa-miR-6881-5p 1 0 0
chr14:39181446|39181656 hsa-miR-2467-3p 1 0 0
chr14:39181446|39181656 hsa-miR-6782-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6810-5p 1 0 0
chr14:39181446|39181656 hsa-miR-1226-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4693-3p 1 1 0
chr14:39181446|39181656 hsa-miR-1229-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4640-5p 1 0 0
chr14:39181446|39181656 hsa-let-7d-5p 1 1 0
chr14:39181446|39181656 hsa-let-7b-5p 1 1 0
chr14:39181446|39181656 hsa-miR-92b-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4743-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4446-3p 1 0 0
chr14:39181446|39181656 hsa-miR-202-3p 1 0 0
chr14:39181446|39181656 hsa-miR-6824-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6789-5p 1 0 0
chr14:39181446|39181656 hsa-let-7g-5p 1 1 0
chr14:39181446|39181656 hsa-miR-2276-3p 1 0 0
chr14:39181446|39181656 hsa-miR-6781-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6877-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6869-5p 1 0 0
chr14:39181446|39181656 hsa-miR-423-5p 1 0 0
chr14:39181446|39181656 hsa-miR-3191-3p 1 0 0
chr14:39181446|39181656 hsa-let-7i-5p 1 1 0
chr14:39181446|39181656 hsa-let-7f-5p 0 1 0
chr14:39181446|39181656 hsa-let-7c-5p 1 1 0
chr14:39181446|39181656 hsa-let-7a-5p 1 1 0
chr14:39181446|39181656 hsa-miR-214-3p 1 0 0
chr14:39181446|39181656 hsa-miR-4796-3p 1 0 0
chr14:39181446|39181656 hsa-miR-98-5p 0 1 0
chr14:39181446|39181656 hsa-miR-16-5p 0 1 0
chr14:39181446|39181656 hsa-miR-1233-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4763-3p 1 0 0
chr14:39181446|39181656 hsa-miR-6778-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6787-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6816-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6865-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6775-5p 1 0 0
chr14:39181446|39181656 hsa-miR-5001-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6743-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6756-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6813-5p 1 0 0
chr14:39181446|39181656 hsa-miR-11181-3p 1 0 0
chr14:39181446|39181656 hsa-miR-3620-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4728-5p 1 0 0
chr14:39181446|39181656 hsa-miR-5196-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6780b-5p 1 0 0
chr14:39181446|39181656 hsa-miR-1237-5p 1 0 0
chr14:39181446|39181656 hsa-miR-1909-3p 1 0 0
chr14:39181446|39181656 hsa-miR-328-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4745-5p 1 1 0
chr14:39181446|39181656 hsa-miR-4749-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6831-5p 1 1 0
chr14:39181446|39181656 hsa-miR-6845-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4758-5p 1 0 0
chr14:39181446|39181656 hsa-miR-1914-3p 1 0 0
chr14:39181446|39181656 hsa-miR-4665-5p 1 0 0
chr14:39181446|39181656 hsa-miR-3679-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4667-5p 1 0 0
chr14:39181446|39181656 hsa-miR-3184-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6762-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6529-5p 1 0 0
chr14:39181446|39181656 hsa-miR-9851-3p 1 0 0
chr14:39181446|39181656 hsa-miR-3619-5p 1 0 0
chr14:39181446|39181656 hsa-miR-128-2-5p 1 0 0
chr14:39181446|39181656 hsa-miR-6838-5p 1 1 0
chr14:39181446|39181656 hsa-miR-3129-5p 1 0 0
chr14:39181446|39181656 hsa-miR-4712-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:39181446|39181656
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MSPAPTPTSTLTTTTSATATISAAAATCTGAATGTTATATTSTAGTTSTAATG
Nucleotide Sequence ATGTCCCCGGCCCCTACTCCGACTTCTACTCTCACTACTACTACTAGTGCTACTGCTACTATCTCTGCTGCTGCTGCCACTTGTACTGGAGCTGCTACTGGAACTACTGCGACTGCTACTACTTCCACTGCTGGAACTACTTCCACTGCTGCTACTGGTTGA
CircID chr14:39181446|39181656
ORF Type ORF2
Protein Length 68
Nucleotide Length 204
Protein Sequence MCFLSLLCPRPLLRLLLSLLLLVLLLLSLLLLPLVLELLLELLRLLLLPLLELLPLLLLVELLLELLL
Nucleotide Sequence CTGTGCTTTCTATCTCTATTATGTCCCCGGCCCCTACTCCGACTTCTACTCTCACTACTACTACTAGTGCTACTGCTACTATCTCTGCTGCTGCTGCCACTTGTACTGGAGCTGCTACTGGAACTACTGCGACTGCTACTACTTCCACTGCTGGAACTACTTCCACTGCTGCTACTGGTTGAACTGCTACTAGAACTGCTACTG
CircID chr14:39181446|39181656
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MYWSCYWNYCDCYYFHCWNYFHCCYWLNCY
Nucleotide Sequence TTGTACTGGAGCTGCTACTGGAACTACTGCGACTGCTACTACTTCCACTGCTGGAACTACTTCCACTGCTGCTACTGGTTGAACTGCTACTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab