CircRNA Information

General Information
circRNA Basic Information
CircID chr14:50359028|50396329
Strand -
CircType exon
Host Gene ENSG00000100490.9;
Algorism find_circ;CIRI2;DCC;
Sequence CAACTCAAGCATCCCAACCTTGTTAACCTCCTGGAAGTCTTCAGGAGGAAACGGAGGCTTCACCTGGTGTTTGAATATTGTGACCACACAGTTCTCCATGAGTTGGACAGATACCAAAGAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr14:50359028|50396329
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MENCVVTIFKHQVKPPFPPEDFQEVNKVGMLEL
Nucleotide Sequence ATGGAGAACTGTGTGGTCACAATATTCAAACACCAGGTGAAGCCTCCGTTTCCTCCTGAAGACTTCCAGGAGGTTAACAAGGTTGGGATGCTTGAGTTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:50359028|50396329 NOP56 1 1 0
chr14:50359028|50396329 ELAVL1 1 3 0
chr14:50359028|50396329 NUMA1 0 1 0
chr14:50359028|50396329 CNBP 0 1 0
chr14:50359028|50396329 TAF15 2 0 0
chr14:50359028|50396329 CPSF4 0 1 0
chr14:50359028|50396329 FUS 1 0 0
chr14:50359028|50396329 DGCR8 1 0 0
chr14:50359028|50396329 NOP58 1 0 0
chr14:50359028|50396329 NONO 1 0 0
chr14:50359028|50396329 U2AF2 6 2 0
chr14:50359028|50396329 PTBP1 1 3 0
chr14:50359028|50396329 HNRNPC 0 5 0
chr14:50359028|50396329 DDX3X 1 0 0
chr14:50359028|50396329 ZC3H7B 0 1 0
chr14:50359028|50396329 LARP7 0 1 0
chr14:50359028|50396329 HNRNPA1 0 1 0
chr14:50359028|50396329 IGF2BP2 0 1 0
chr14:50359028|50396329 DIS3L2 1 0 0
chr14:50359028|50396329 PRPF8 1 0 0
chr14:50359028|50396329 SLTM 1 0 0
chr14:50359028|50396329 DKC1 1 0 0
chr14:50359028|50396329 AGO2 2 0 0
chr14:50359028|50396329 EIF4A3 4 2 0
chr14:50359028|50396329 FBL 2 0 0