CircRNA Information

General Information
circRNA Basic Information
CircID chr14:63980986|63986617
Strand +
CircType exon
Host Gene ENSG00000054654.15;
Algorism CIRI2;find_circ;DCC;
Sequence CTGGAGAATGTCAGAATATTAATAAACAGTATATGATGGTGAAATCTGATGTTTGTATGTATAGAAAAAATATATATAATGTGAAGTCCACTCTACAAAAAGTGCTGGCATGTTGGGCTACTTATGTGGAAAACCTTCGCTTACTAAGGGCTTGCTTTGAGGAGACAAAGAAGGAAGAAATTAAAGAGGTACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACACGCTACTTTAAATGAAGCAGGAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTGGATCATCTATTTCTAAAGAACTGAGAAGGCTGAATAAAAGATGGAGAAAGTTGGTTTCAAAAACTCAACTTGAAATGAACCTGCCACTGATGATAAAAAAACAGGATCAGCCCACTTTTGACAATTCTGGAAATATTCTATCTAAAGAAGAGAAAGCAACTGTTGAGTTTTCAACAGATATGTCAGTAGAACTTCCTGAAAATTATAATCAAAATATAAAGGCTGGAGAGAAACATGAAAAAGAAAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAAAGATGTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATCAAGATGATGTGGACACCTCAATGGAAGAATCTTTGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr14:63980986|63986617
ORF Type ORF1
Protein Length 211
Nucleotide Length 633
Protein Sequence MMVKSDVCMYRKNIYNVKSTLQKVLACWATYVENLRLLRACFEETKKEEIKEVPFETLAQWNLEHATLNEAGNFLVEVSNDVVGSSISKELRRLNKRWRKLVSKTQLEMNLPLMIKKQDQPTFDNSGNILSKEEKATVEFSTDMSVELPENYNQNIKAGEKHEKENEEFTGQLKVAKDVEKLIGQVEIWEAEAKSVLDQDDVDTSMEESLK
Nucleotide Sequence ATGATGGTGAAATCTGATGTTTGTATGTATAGAAAAAATATATATAATGTGAAGTCCACTCTACAAAAAGTGCTGGCATGTTGGGCTACTTATGTGGAAAACCTTCGCTTACTAAGGGCTTGCTTTGAGGAGACAAAGAAGGAAGAAATTAAAGAGGTACCCTTTGAGACACTAGCCCAGTGGAATCTAGAACACGCTACTTTAAATGAAGCAGGAAATTTCTTAGTCGAAGTCAGCAATGATGTGGTTGGATCATCTATTTCTAAAGAACTGAGAAGGCTGAATAAAAGATGGAGAAAGTTGGTTTCAAAAACTCAACTTGAAATGAACCTGCCACTGATGATAAAAAAACAGGATCAGCCCACTTTTGACAATTCTGGAAATATTCTATCTAAAGAAGAGAAAGCAACTGTTGAGTTTTCAACAGATATGTCAGTAGAACTTCCTGAAAATTATAATCAAAATATAAAGGCTGGAGAGAAACATGAAAAAGAAAATGAAGAATTCACAGGGCAACTAAAAGTGGCTAAAGATGTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATCAAGATGATGTGGACACCTCAATGGAAGAATCTTTGAAG

CircID chr14:63980986|63986617
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MLKNSLDKWKSGRQKPNLFWIKMMWTPQWKNL*
Nucleotide Sequence ATGTTGAAAAACTCATTGGACAAGTGGAAATCTGGGAGGCAGAAGCCAAATCTGTTTTGGATCAAGATGATGTGGACACCTCAATGGAAGAATCTTTGA

CircID chr14:63980986|63986617
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MPALFVEWTSHYIYFFYTYKHQISPSYTVY*
Nucleotide Sequence ATGCCAGCACTTTTTGTAGAGTGGACTTCACATTATATATATTTTTTCTATACATACAAACATCAGATTTCACCATCATATACTGTTTATTAA

CircID chr14:63980986|63986617
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MSFSTSLATFSCPVNSSFSFSCFSPAFIF*
Nucleotide Sequence ATGAGTTTTTCAACATCTTTAGCCACTTTTAGTTGCCCTGTGAATTCTTCATTTTCTTTTTCATGTTTCTCTCCAGCCTTTATATTTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:63980986|63986617 FMR1 0 1 3
chr14:63980986|63986617 NOP56 0 1 0
chr14:63980986|63986617 ELAVL1 6 0 2
chr14:63980986|63986617 CNBP 0 0 1
chr14:63980986|63986617 YTHDF1 0 1 0
chr14:63980986|63986617 UPF1 1 2 0
chr14:63980986|63986617 TAF15 0 0 2
chr14:63980986|63986617 CPSF7 0 2 1
chr14:63980986|63986617 CPSF6 0 3 0
chr14:63980986|63986617 NUDT21 0 3 0
chr14:63980986|63986617 TIA1 0 1 0
chr14:63980986|63986617 FUS 0 1 1
chr14:63980986|63986617 DGCR8 0 0 1
chr14:63980986|63986617 SRSF1 3 2 6
chr14:63980986|63986617 NOP58 2 2 10
chr14:63980986|63986617 U2AF2 24 16 2
chr14:63980986|63986617 DDX54 2 1 21
chr14:63980986|63986617 IGF2BP1 0 1 0
chr14:63980986|63986617 GRWD1 0 0 1
chr14:63980986|63986617 RBM10 5 0 0
chr14:63980986|63986617 HNRNPL 1 0 0
chr14:63980986|63986617 HNRNPA2B1 0 1 1
chr14:63980986|63986617 FIP1L1 1 0 3
chr14:63980986|63986617 PTBP1 1 7 0
chr14:63980986|63986617 HNRNPC 40 28 6
chr14:63980986|63986617 ZNF184 0 0 3
chr14:63980986|63986617 HNRNPA1 0 3 2
chr14:63980986|63986617 DDX3X 0 3 0
chr14:63980986|63986617 ZC3H7B 0 1 1
chr14:63980986|63986617 ACIN1 4 1 8
chr14:63980986|63986617 RANGAP1 0 0 1
chr14:63980986|63986617 LIN28A 0 0 1
chr14:63980986|63986617 LIN28B 1 1 1
chr14:63980986|63986617 FXR2 0 0 2
chr14:63980986|63986617 UCHL5 0 0 1
chr14:63980986|63986617 DICER1 1 0 0
chr14:63980986|63986617 IGF2BP3 0 0 2
chr14:63980986|63986617 IGF2BP2 1 3 13
chr14:63980986|63986617 FTO 1 0 0
chr14:63980986|63986617 TARDBP 0 4 0
chr14:63980986|63986617 YTHDC1 0 2 0
chr14:63980986|63986617 BUD13 1 2 3
chr14:63980986|63986617 RBFOX2 0 1 0
chr14:63980986|63986617 PRPF8 0 3 1
chr14:63980986|63986617 CSTF2T 2 1 5
chr14:63980986|63986617 SRRM4 0 1 0
chr14:63980986|63986617 CSTF2 0 2 1
chr14:63980986|63986617 TARBP2 0 1 0
chr14:63980986|63986617 RNF219 0 0 1
chr14:63980986|63986617 TIAL1 0 1 0
chr14:63980986|63986617 PPIG 0 1 1
chr14:63980986|63986617 FBL 0 0 5
chr14:63980986|63986617 ATXN2 0 1 2
chr14:63980986|63986617 EIF4A3 7 0 5
chr14:63980986|63986617 AGO2 1 0 2