CircRNA Information

General Information
circRNA Basic Information
CircID chr14:64733935|64734116
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TGCTCCACCTTCTCGAAGGCTAACACCCACATGTCAATCCACACACACATTCAGGGGACCCACAGGTCATCACCAATCAAAACCCAACACATCTGTGGGACCCAAGCCAGGACACCACTCTCAGTCACTTTAGAATCCTTCTCTCCCAGGGTCTTAAAGACAATTCTCACCCCAACTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:64733935|64734116 hsa-miR-17-5p 0 0 1
chr14:64733935|64734116 hsa-miR-17-3p 0 0 1
chr14:64733935|64734116 hsa-miR-20a-5p 0 0 1
chr14:64733935|64734116 hsa-miR-20a-3p 0 0 1
chr14:64733935|64734116 hsa-miR-93-5p 0 0 1
chr14:64733935|64734116 hsa-miR-93-3p 0 0 1
chr14:64733935|64734116 hsa-miR-106a-5p 0 0 1
chr14:64733935|64734116 hsa-miR-106a-3p 0 0 1
chr14:64733935|64734116 hsa-miR-208a-5p 0 0 1
chr14:64733935|64734116 hsa-miR-208a-3p 0 0 1
chr14:64733935|64734116 hsa-miR-134-5p 0 0 1
chr14:64733935|64734116 hsa-miR-134-3p 0 0 1
chr14:64733935|64734116 hsa-miR-185-5p 0 0 1
chr14:64733935|64734116 hsa-miR-185-3p 0 0 1
chr14:64733935|64734116 hsa-miR-106b-5p 0 0 1
chr14:64733935|64734116 hsa-miR-106b-3p 0 0 1
chr14:64733935|64734116 hsa-miR-20b-5p 0 0 1
chr14:64733935|64734116 hsa-miR-20b-3p 0 0 1
chr14:64733935|64734116 hsa-miR-489-5p 0 0 1
chr14:64733935|64734116 hsa-miR-489-3p 0 0 1
chr14:64733935|64734116 hsa-miR-511-5p 0 0 1
chr14:64733935|64734116 hsa-miR-511-3p 0 0 1
chr14:64733935|64734116 hsa-miR-519d-5p 0 0 1
chr14:64733935|64734116 hsa-miR-519d-3p 0 0 1
chr14:64733935|64734116 hsa-miR-504-5p 0 0 1
chr14:64733935|64734116 hsa-miR-504-3p 0 0 1
chr14:64733935|64734116 hsa-miR-571 0 0 1
chr14:64733935|64734116 hsa-miR-580-5p 0 0 1
chr14:64733935|64734116 hsa-miR-580-3p 0 0 1
chr14:64733935|64734116 hsa-miR-608 0 0 1
chr14:64733935|64734116 hsa-miR-609 0 0 1
chr14:64733935|64734116 hsa-miR-629-5p 0 0 1
chr14:64733935|64734116 hsa-miR-629-3p 0 0 1
chr14:64733935|64734116 hsa-miR-631 0 0 1
chr14:64733935|64734116 hsa-miR-208b-5p 0 0 1
chr14:64733935|64734116 hsa-miR-208b-3p 0 0 1
chr14:64733935|64734116 hsa-miR-299-3p 0 0 1
chr14:64733935|64734116 hsa-miR-509-3p 0 0 1
chr14:64733935|64734116 hsa-miR-331-3p 0 0 1
chr14:64733935|64734116 hsa-miR-188-3p 0 0 1
chr14:64733935|64734116 hsa-miR-576-3p 0 0 1
chr14:64733935|64734116 hsa-miR-342-5p 0 0 1
chr14:64733935|64734116 hsa-miR-644 0 0 1
chr14:64733935|64734116 hsa-miR-219-2-3p 0 0 1
chr14:64733935|64734116 hsa-miR-147 0 0 1
chr14:64733935|64734116 hsa-miR-499-5p 0 0 1
chr14:64733935|64734116 hsa-miR-765 1 0 0
chr14:64733935|64734116 hsa-miR-1268a 1 0 0
chr14:64733935|64734116 hsa-miR-711 1 0 0
chr14:64733935|64734116 hsa-miR-3147 1 0 0
chr14:64733935|64734116 hsa-miR-3175 1 0 0
chr14:64733935|64734116 hsa-miR-4322 1 0 0
chr14:64733935|64734116 hsa-miR-4259 1 0 0
chr14:64733935|64734116 hsa-miR-3609 1 0 0
chr14:64733935|64734116 hsa-miR-3911 1 0 0
chr14:64733935|64734116 hsa-miR-1268b 1 0 0
chr14:64733935|64734116 hsa-miR-4463 1 0 0
chr14:64733935|64734116 hsa-miR-4499 1 0 0
chr14:64733935|64734116 hsa-miR-4507 1 0 0
chr14:64733935|64734116 hsa-miR-4513 1 0 0
chr14:64733935|64734116 hsa-miR-4523 1 0 0
chr14:64733935|64734116 hsa-miR-4656 1 0 0
chr14:64733935|64734116 hsa-miR-4658 1 0 0
chr14:64733935|64734116 hsa-miR-5190 1 0 0
chr14:64733935|64734116 hsa-miR-5192 1 0 0
chr14:64733935|64734116 hsa-miR-5698 1 0 0
chr14:64733935|64734116 hsa-miR-6068 1 0 0
chr14:64733935|64734116 hsa-miR-7974 1 0 0
chr14:64733935|64734116 hsa-miR-8077 1 0 0
chr14:64733935|64734116 hsa-miR-8085 1 0 0
chr14:64733935|64734116 hsa-miR-12119 1 0 0
chr14:64733935|64734116 hsa-miR-6894-5p 1 0 0
chr14:64733935|64734116 hsa-miR-7851-3p 1 0 0
chr14:64733935|64734116 hsa-miR-6867-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6746-5p 1 0 0
chr14:64733935|64734116 hsa-miR-432-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6742-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6748-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6772-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6793-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6796-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6798-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6760-5p 1 0 0
chr14:64733935|64734116 hsa-miR-7109-5p 1 0 0
chr14:64733935|64734116 hsa-miR-149-3p 1 0 0
chr14:64733935|64734116 hsa-miR-574-5p 1 0 0
chr14:64733935|64734116 hsa-miR-873-3p 1 0 0
chr14:64733935|64734116 hsa-miR-6761-5p 1 0 0
chr14:64733935|64734116 hsa-miR-541-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6857-3p 1 0 0
chr14:64733935|64734116 hsa-miR-670-5p 1 0 0
chr14:64733935|64734116 hsa-miR-1207-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6812-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6737-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6752-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6803-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6819-5p 1 0 0
chr14:64733935|64734116 hsa-miR-10401-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6751-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6779-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6780a-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6788-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6797-5p 1 0 0
chr14:64733935|64734116 hsa-miR-5196-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6848-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6858-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6889-5p 1 0 0
chr14:64733935|64734116 hsa-miR-1238-5p 1 0 0
chr14:64733935|64734116 hsa-miR-4758-5p 1 0 0
chr14:64733935|64734116 hsa-miR-4769-5p 1 0 0
chr14:64733935|64734116 hsa-miR-3940-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6731-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6856-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6855-5p 1 0 0
chr14:64733935|64734116 hsa-miR-4646-5p 1 0 0
chr14:64733935|64734116 hsa-miR-4747-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6785-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6790-5p 1 0 0
chr14:64733935|64734116 hsa-miR-6855-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:64733935|64734116
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MSIHTHIQGTHRSSPIKTQHICGTQARTPLSVTLESFSPRVLKTILTPTP
Nucleotide Sequence ATGTCAATCCACACACACATTCAGGGGACCCACAGGTCATCACCAATCAAAACCCAACACATCTGTGGGACCCAAGCCAGGACACCACTCTCAGTCACTTTAGAATCCTTCTCTCCCAGGGTCTTAAAGACAATTCTCACCCCAACTCCC
CircID chr14:64733935|64734116
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MWDPSQDTTLSHFRILLSQGLKDNSHPNSH
Nucleotide Sequence CTGTGGGACCCAAGCCAGGACACCACTCTCAGTCACTTTAGAATCCTTCTCTCCCAGGGTCTTAAAGACAATTCTCACCCCAACTCCCAC
CircID chr14:64733935|64734116
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MGEKDSKVTESGVLAWVPQMCWVLIGDDLWVP
Nucleotide Sequence CTGGGAGAGAAGGATTCTAAAGTGACTGAGAGTGGTGTCCTGGCTTGGGTCCCACAGATGTGTTGGGTTTTGATTGGTGATGACCTGTGGGTCCCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab