CircRNA Information

General Information
circRNA Basic Information
CircID chr14:64743572|64743739
Strand +
CircType exon
Host Gene ENSG00000126822.14;
Algorism CIRI2;
Sequence CTCCAACATGACTCCTCCCTCCCCCAGGAGTCAGCATCAACCGACAGAGTTCAAGGCCTGGAACTTCTCTCTAAGGTTTCTCACTCTGCCCTGCTGGCTCGGGTCTGCCGGGTCCCTGGAACCCTCTTCCTTCGGCTGGCACTCTGCAGACTGCTGGAAGTCCTGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:64743572|64743739 hsa-miR-214-5p 0 0 1
chr14:64743572|64743739 hsa-miR-214-3p 0 0 1
chr14:64743572|64743739 hsa-miR-345-5p 0 0 1
chr14:64743572|64743739 hsa-miR-345-3p 0 0 1
chr14:64743572|64743739 hsa-miR-539-5p 0 0 1
chr14:64743572|64743739 hsa-miR-539-3p 0 0 1
chr14:64743572|64743739 hsa-miR-617 0 1 1
chr14:64743572|64743739 hsa-miR-622 0 1 1
chr14:64743572|64743739 hsa-miR-625-5p 0 0 1
chr14:64743572|64743739 hsa-miR-625-3p 0 0 1
chr14:64743572|64743739 hsa-miR-637 0 0 1
chr14:64743572|64743739 hsa-miR-765 0 0 1
chr14:64743572|64743739 hsa-miR-1202 0 1 1
chr14:64743572|64743739 hsa-miR-1205 0 0 1
chr14:64743572|64743739 hsa-miR-1303 0 1 1
chr14:64743572|64743739 hsa-miR-1275 0 0 1
chr14:64743572|64743739 hsa-miR-1252-5p 0 0 1
chr14:64743572|64743739 hsa-miR-1252-3p 0 0 1
chr14:64743572|64743739 hsa-miR-1321 0 1 1
chr14:64743572|64743739 hsa-miR-615-3p 0 0 1
chr14:64743572|64743739 hsa-miR-941 0 0 1
chr14:64743572|64743739 hsa-miR-1184 0 0 1
chr14:64743572|64743739 hsa-miR-628-5p 0 0 1
chr14:64743572|64743739 hsa-miR-338-3p 0 0 1
chr14:64743572|64743739 hsa-miR-612 1 0 0
chr14:64743572|64743739 hsa-miR-658 1 0 0
chr14:64743572|64743739 hsa-miR-761 0 1 0
chr14:64743572|64743739 hsa-miR-3132 1 1 0
chr14:64743572|64743739 hsa-miR-3661 0 1 0
chr14:64743572|64743739 hsa-miR-4510 0 1 0
chr14:64743572|64743739 hsa-miR-4530 0 1 0
chr14:64743572|64743739 hsa-miR-3972 1 0 0
chr14:64743572|64743739 hsa-miR-4689 0 1 0
chr14:64743572|64743739 hsa-miR-4721 1 0 0
chr14:64743572|64743739 hsa-miR-4739 0 1 0
chr14:64743572|64743739 hsa-miR-5698 0 1 0
chr14:64743572|64743739 hsa-miR-6133 0 1 0
chr14:64743572|64743739 hsa-miR-8083 0 1 0
chr14:64743572|64743739 hsa-miR-8089 1 0 0
chr14:64743572|64743739 hsa-miR-9718 0 1 0
chr14:64743572|64743739 hsa-miR-7106-5p 1 1 0
chr14:64743572|64743739 hsa-miR-6825-5p 1 1 0
chr14:64743572|64743739 hsa-miR-6894-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6510-5p 1 1 0
chr14:64743572|64743739 hsa-miR-3928-3p 1 1 0
chr14:64743572|64743739 hsa-miR-23b-5p 0 1 0
chr14:64743572|64743739 hsa-miR-4728-3p 0 1 0
chr14:64743572|64743739 hsa-miR-6732-5p 1 0 0
chr14:64743572|64743739 hsa-miR-23a-5p 0 1 0
chr14:64743572|64743739 hsa-miR-6798-5p 1 0 0
chr14:64743572|64743739 hsa-miR-3194-5p 0 1 0
chr14:64743572|64743739 hsa-miR-6852-5p 1 1 0
chr14:64743572|64743739 hsa-miR-7109-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6749-5p 1 0 0
chr14:64743572|64743739 hsa-miR-149-3p 1 1 0
chr14:64743572|64743739 hsa-miR-3158-5p 0 1 0
chr14:64743572|64743739 hsa-miR-423-5p 1 0 0
chr14:64743572|64743739 hsa-miR-3158-3p 0 1 0
chr14:64743572|64743739 hsa-miR-199b-3p 0 1 0
chr14:64743572|64743739 hsa-miR-199a-3p 0 1 0
chr14:64743572|64743739 hsa-miR-6870-5p 1 1 0
chr14:64743572|64743739 hsa-miR-6775-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6756-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6803-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6851-5p 1 0 0
chr14:64743572|64743739 hsa-miR-1249-5p 1 1 0
chr14:64743572|64743739 hsa-miR-6722-3p 1 0 0
chr14:64743572|64743739 hsa-miR-6751-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6780a-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6797-5p 1 1 0
chr14:64743572|64743739 hsa-miR-7111-5p 1 1 0
chr14:64743572|64743739 hsa-miR-4728-5p 1 1 0
chr14:64743572|64743739 hsa-miR-328-5p 1 0 0
chr14:64743572|64743739 hsa-miR-4632-5p 0 1 0
chr14:64743572|64743739 hsa-miR-6735-5p 1 1 0
chr14:64743572|64743739 hsa-miR-6858-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6883-5p 1 1 0
chr14:64743572|64743739 hsa-miR-4723-5p 0 1 0
chr14:64743572|64743739 hsa-miR-6831-5p 1 0 0
chr14:64743572|64743739 hsa-miR-5586-3p 0 1 0
chr14:64743572|64743739 hsa-miR-3085-5p 1 1 0
chr14:64743572|64743739 hsa-miR-7843-5p 0 1 0
chr14:64743572|64743739 hsa-miR-4665-5p 0 1 0
chr14:64743572|64743739 hsa-miR-4700-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6785-5p 0 1 0
chr14:64743572|64743739 hsa-miR-6791-5p 1 0 0
chr14:64743572|64743739 hsa-miR-6837-5p 1 0 0
chr14:64743572|64743739 hsa-miR-3619-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:64743572|64743739
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MELLSKVSHSALLARVCRVPGTLFLRLALCRLLEVLN
Nucleotide Sequence CTGGAACTTCTCTCTAAGGTTTCTCACTCTGCCCTGCTGGCTCGGGTCTGCCGGGTCCCTGGAACCCTCTTCCTTCGGCTGGCACTCTGCAGACTGCTGGAAGTCCTGAAC
CircID chr14:64743572|64743739
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MTPPSPRSQHQPTEFKAWNFSLRFLTLPCWLGSAGSLEPSSFGWHSADCWKS
Nucleotide Sequence ATGACTCCTCCCTCCCCCAGGAGTCAGCATCAACCGACAGAGTTCAAGGCCTGGAACTTCTCTCTAAGGTTTCTCACTCTGCCCTGCTGGCTCGGGTCTGCCGGGTCCCTGGAACCCTCTTCCTTCGGCTGGCACTCTGCAGACTGCTGGAAGTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab