CircRNA Information

General Information
circRNA Basic Information
CircID chr14:64945939|64946078
Strand +
CircType exon
Host Gene ENSG00000139998.13;
Algorism CIRI2;
Sequence CCTAAACTTTTGGTGGCCTGGGGCATGTCTTGAGGCCCAGACTGTTAACCAGGCTCTGCTGGCCTGTTTACTCGTCACCACCTCTGCACCTGCTGTCTTGAGACTCCATCCAGCCCCAGGCACGCCACCTGCTCCTGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:64945939|64946078 hsa-miR-30a-5p 0 0 1
chr14:64945939|64946078 hsa-miR-30a-3p 0 0 1
chr14:64945939|64946078 hsa-miR-30d-5p 0 0 1
chr14:64945939|64946078 hsa-miR-30d-3p 0 0 1
chr14:64945939|64946078 hsa-miR-212-5p 0 0 1
chr14:64945939|64946078 hsa-miR-212-3p 0 0 1
chr14:64945939|64946078 hsa-miR-214-5p 0 0 1
chr14:64945939|64946078 hsa-miR-214-3p 0 0 1
chr14:64945939|64946078 hsa-miR-30b-5p 0 0 1
chr14:64945939|64946078 hsa-miR-30b-3p 0 0 1
chr14:64945939|64946078 hsa-miR-132-5p 0 0 1
chr14:64945939|64946078 hsa-miR-132-3p 0 0 1
chr14:64945939|64946078 hsa-miR-30e-5p 0 0 1
chr14:64945939|64946078 hsa-miR-30e-3p 0 0 1
chr14:64945939|64946078 hsa-miR-561-5p 0 0 1
chr14:64945939|64946078 hsa-miR-561-3p 0 0 1
chr14:64945939|64946078 hsa-miR-612 0 0 1
chr14:64945939|64946078 hsa-miR-622 0 0 1
chr14:64945939|64946078 hsa-miR-641 0 1 1
chr14:64945939|64946078 hsa-miR-661 1 0 1
chr14:64945939|64946078 hsa-miR-922 0 0 1
chr14:64945939|64946078 hsa-miR-1287-5p 0 0 1
chr14:64945939|64946078 hsa-miR-1287-3p 0 0 1
chr14:64945939|64946078 hsa-miR-513c-5p 0 0 1
chr14:64945939|64946078 hsa-miR-513c-3p 0 0 1
chr14:64945939|64946078 hsa-miR-1289 0 0 1
chr14:64945939|64946078 hsa-miR-550 0 0 1
chr14:64945939|64946078 hsa-miR-30c 0 0 1
chr14:64945939|64946078 hsa-miR-1285 0 0 1
chr14:64945939|64946078 hsa-miR-1254 0 0 1
chr14:64945939|64946078 hsa-miR-608 1 0 0
chr14:64945939|64946078 hsa-miR-1183 1 0 0
chr14:64945939|64946078 hsa-miR-4294 1 1 0
chr14:64945939|64946078 hsa-miR-4257 0 1 0
chr14:64945939|64946078 hsa-miR-3665 1 1 0
chr14:64945939|64946078 hsa-miR-3937 1 0 0
chr14:64945939|64946078 hsa-miR-4436a 1 0 0
chr14:64945939|64946078 hsa-miR-3135b 1 0 0
chr14:64945939|64946078 hsa-miR-4466 1 0 0
chr14:64945939|64946078 hsa-miR-4651 1 0 0
chr14:64945939|64946078 hsa-miR-4669 1 0 0
chr14:64945939|64946078 hsa-miR-4688 1 0 0
chr14:64945939|64946078 hsa-miR-5090 1 0 0
chr14:64945939|64946078 hsa-miR-5787 1 0 0
chr14:64945939|64946078 hsa-miR-6081 1 1 0
chr14:64945939|64946078 hsa-miR-6085 1 0 0
chr14:64945939|64946078 hsa-miR-6134 0 1 0
chr14:64945939|64946078 hsa-miR-8089 1 0 0
chr14:64945939|64946078 hsa-miR-4433a-3p 1 0 0
chr14:64945939|64946078 hsa-miR-7106-5p 1 0 0
chr14:64945939|64946078 hsa-miR-1972 0 1 0
chr14:64945939|64946078 hsa-miR-125a-3p 1 0 0
chr14:64945939|64946078 hsa-miR-6799-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6746-5p 1 0 0
chr14:64945939|64946078 hsa-miR-4722-5p 1 0 0
chr14:64945939|64946078 hsa-miR-185-3p 0 1 0
chr14:64945939|64946078 hsa-miR-6732-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6805-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6798-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6852-5p 0 1 0
chr14:64945939|64946078 hsa-miR-939-3p 1 0 0
chr14:64945939|64946078 hsa-miR-4640-5p 1 0 0
chr14:64945939|64946078 hsa-miR-296-3p 1 0 0
chr14:64945939|64946078 hsa-miR-4690-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6749-5p 1 1 0
chr14:64945939|64946078 hsa-miR-4743-5p 1 0 0
chr14:64945939|64946078 hsa-miR-550b-2-5p 1 0 0
chr14:64945939|64946078 hsa-miR-7846-3p 0 1 0
chr14:64945939|64946078 hsa-miR-3120-3p 1 0 0
chr14:64945939|64946078 hsa-miR-3944-5p 1 0 0
chr14:64945939|64946078 hsa-miR-1295b-3p 1 0 0
chr14:64945939|64946078 hsa-miR-3664-3p 0 1 0
chr14:64945939|64946078 hsa-miR-3157-3p 0 1 0
chr14:64945939|64946078 hsa-miR-4763-3p 1 0 0
chr14:64945939|64946078 hsa-miR-6893-5p 1 0 0
chr14:64945939|64946078 hsa-miR-5001-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6726-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6743-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6752-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6756-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6813-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6815-5p 1 1 0
chr14:64945939|64946078 hsa-miR-6819-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6851-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6722-3p 1 0 0
chr14:64945939|64946078 hsa-miR-4726-5p 1 1 0
chr14:64945939|64946078 hsa-miR-675-5p 1 0 0
chr14:64945939|64946078 hsa-miR-6846-5p 1 1 0
chr14:64945939|64946078 hsa-miR-6858-5p 1 0 0
chr14:64945939|64946078 hsa-miR-10396a-3p 1 0 0
chr14:64945939|64946078 hsa-miR-10396b-3p 1 0 0
chr14:64945939|64946078 hsa-miR-6791-5p 1 0 0
chr14:64945939|64946078 hsa-miR-550a-3-5p 0 1 0
chr14:64945939|64946078 hsa-miR-550a-5p 0 1 0
chr14:64945939|64946078 hsa-miR-330-5p 1 0 0
chr14:64945939|64946078 hsa-miR-3619-5p 1 1 0
chr14:64945939|64946078 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:64945939|64946078
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MLACLLVTTSAPAVLRLHPAPGTPPAPE
Nucleotide Sequence CTGCTGGCCTGTTTACTCGTCACCACCTCTGCACCTGCTGTCTTGAGACTCCATCCAGCCCCAGGCACGCCACCTGCTCCTGAG
CircID chr14:64945939|64946078
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MGHVLRPRLLTRLCWPVYSSPPLHLLS
Nucleotide Sequence CTGGGGCATGTCTTGAGGCCCAGACTGTTAACCAGGCTCTGCTGGCCTGTTTACTCGTCACCACCTCTGCACCTGCTGTCTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab