CircRNA Information

General Information
circRNA Basic Information
CircID chr14:67312527|67316903
Strand +
CircType exon
Host Gene ENSG00000072415.8;
Algorism find_circ;CIRI2;DCC;
Sequence ATCCATGTAAAAGCTCATTTTGACTATGACCCCTCAGATGACCCTTATGTTCCATGTCGAGAGTTAGGTCTGTCTTTTCAAAAAGGTGATATACTTCATGTGATCAGTCAAGAAGATCCAAACTGGTGGCAGGCCTACAGGGAAGGGGACGAAGATAATCAACCTCTAGCCGGGCTTGTTCCAGGGAAAAGCTTTCAGCAGCAAAGGGAAGCCATGAAACAAACCATAGAAGAAGATAAGGAGCCAGAAAAATCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:67312527|67316903 hsa-miR-93-3p 0 1 1
chr14:67312527|67316903 hsa-miR-149-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:67312527|67316903 KHSRP 1 0 0
chr14:67312527|67316903 ELAVL1 1 3 2
chr14:67312527|67316903 FAM120A 0 0 1
chr14:67312527|67316903 FKBP4 1 0 0
chr14:67312527|67316903 PRPF8 0 2 1
chr14:67312527|67316903 UPF1 0 1 0
chr14:67312527|67316903 SRSF10 0 1 0
chr14:67312527|67316903 TAF15 0 1 0
chr14:67312527|67316903 CAPRIN1 0 1 0
chr14:67312527|67316903 FMR1 0 1 2
chr14:67312527|67316903 CPSF6 0 1 2
chr14:67312527|67316903 NUDT21 1 0 0
chr14:67312527|67316903 FUS 0 3 0
chr14:67312527|67316903 SRSF1 1 1 2
chr14:67312527|67316903 NOP58 6 1 2
chr14:67312527|67316903 U2AF1 0 2 2
chr14:67312527|67316903 U2AF2 4 2 2
chr14:67312527|67316903 NOP56 2 0 0
chr14:67312527|67316903 DDX54 1 4 3
chr14:67312527|67316903 RBM10 0 1 0
chr14:67312527|67316903 FIP1L1 1 0 0
chr14:67312527|67316903 PTBP1 0 2 0
chr14:67312527|67316903 HNRNPC 10 1 0
chr14:67312527|67316903 TRA2A 0 0 1
chr14:67312527|67316903 ZNF184 0 1 0
chr14:67312527|67316903 HNRNPA1 1 0 0
chr14:67312527|67316903 ACIN1 0 1 1
chr14:67312527|67316903 LIN28B 0 1 1
chr14:67312527|67316903 FXR1 0 0 1
chr14:67312527|67316903 FXR2 0 0 1
chr14:67312527|67316903 SND1 0 0 1
chr14:67312527|67316903 IGF2BP2 1 5 4
chr14:67312527|67316903 YTHDC1 0 1 0
chr14:67312527|67316903 BUD13 0 1 1
chr14:67312527|67316903 RBM47 0 0 1
chr14:67312527|67316903 CSTF2T 1 1 0
chr14:67312527|67316903 TIAL1 1 0 0
chr14:67312527|67316903 AGO2 0 1 1
chr14:67312527|67316903 EIF4A3 1 4 3
chr14:67312527|67316903 FBL 0 0 1