CircRNA Information

General Information
circRNA Basic Information
CircID chr14:67471724|67471877
Strand -
CircType exon
Host Gene ENSG00000198133.7;
Algorism CIRI2;
Sequence CTAGGACACAACTGTGGCCCACCCCACCACACCCTGCACCCCACCACACCCTGCACAGTATGGGCAGGGCAGCCAGCAGGGAAGAGGACATTCTCTCCACAGGTGATACCGTCACTTTGTAATGATCCATAAAAAGGGGAAGGCTAATTTCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:67471724|67471877 hsa-miR-185-5p 0 0 1
chr14:67471724|67471877 hsa-miR-185-3p 0 0 1
chr14:67471724|67471877 hsa-miR-370-5p 0 0 1
chr14:67471724|67471877 hsa-miR-370-3p 0 0 1
chr14:67471724|67471877 hsa-miR-520g-5p 0 0 1
chr14:67471724|67471877 hsa-miR-520g-3p 0 0 1
chr14:67471724|67471877 hsa-miR-520h 0 0 1
chr14:67471724|67471877 hsa-miR-592 0 0 1
chr14:67471724|67471877 hsa-miR-599 0 0 1
chr14:67471724|67471877 hsa-miR-604 0 0 1
chr14:67471724|67471877 hsa-miR-608 1 0 1
chr14:67471724|67471877 hsa-miR-647 0 0 1
chr14:67471724|67471877 hsa-miR-892a 0 0 1
chr14:67471724|67471877 hsa-miR-874-5p 0 0 1
chr14:67471724|67471877 hsa-miR-874-3p 0 0 1
chr14:67471724|67471877 hsa-miR-541-5p 0 0 1
chr14:67471724|67471877 hsa-miR-541-3p 0 0 1
chr14:67471724|67471877 hsa-miR-1236-5p 0 0 1
chr14:67471724|67471877 hsa-miR-1236-3p 0 0 1
chr14:67471724|67471877 hsa-miR-1246 0 0 1
chr14:67471724|67471877 hsa-miR-146b-3p 0 0 1
chr14:67471724|67471877 hsa-miR-654-5p 1 1 1
chr14:67471724|67471877 hsa-miR-524-5p 0 0 1
chr14:67471724|67471877 hsa-miR-342-5p 1 1 1
chr14:67471724|67471877 hsa-miR-520d-5p 0 0 1
chr14:67471724|67471877 hsa-miR-1274a 0 0 1
chr14:67471724|67471877 hsa-miR-613 0 1 0
chr14:67471724|67471877 hsa-miR-1268a 1 0 0
chr14:67471724|67471877 hsa-miR-4270 1 0 0
chr14:67471724|67471877 hsa-miR-3609 0 1 0
chr14:67471724|67471877 hsa-miR-1268b 1 0 0
chr14:67471724|67471877 hsa-miR-4455 0 1 0
chr14:67471724|67471877 hsa-miR-4466 1 0 0
chr14:67471724|67471877 hsa-miR-1587 1 0 0
chr14:67471724|67471877 hsa-miR-4651 1 1 0
chr14:67471724|67471877 hsa-miR-4706 1 0 0
chr14:67471724|67471877 hsa-miR-5572 1 1 0
chr14:67471724|67471877 hsa-miR-6132 1 0 0
chr14:67471724|67471877 hsa-miR-6860 1 0 0
chr14:67471724|67471877 hsa-miR-7704 1 0 0
chr14:67471724|67471877 hsa-miR-8079 1 0 0
chr14:67471724|67471877 hsa-miR-92a-2-5p 0 1 0
chr14:67471724|67471877 hsa-miR-504-3p 1 0 0
chr14:67471724|67471877 hsa-miR-6747-5p 1 0 0
chr14:67471724|67471877 hsa-miR-7114-5p 1 1 0
chr14:67471724|67471877 hsa-miR-3064-5p 0 1 0
chr14:67471724|67471877 hsa-miR-6742-5p 1 1 0
chr14:67471724|67471877 hsa-miR-3151-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6772-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6782-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6765-3p 1 0 0
chr14:67471724|67471877 hsa-miR-6728-3p 0 1 0
chr14:67471724|67471877 hsa-miR-6786-5p 1 0 0
chr14:67471724|67471877 hsa-miR-1229-5p 1 0 0
chr14:67471724|67471877 hsa-miR-5580-5p 0 1 0
chr14:67471724|67471877 hsa-miR-1228-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6823-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6752-3p 0 1 0
chr14:67471724|67471877 hsa-miR-3614-3p 0 1 0
chr14:67471724|67471877 hsa-miR-3173-5p 0 1 0
chr14:67471724|67471877 hsa-miR-4763-3p 0 1 0
chr14:67471724|67471877 hsa-miR-6769b-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6812-5p 1 1 0
chr14:67471724|67471877 hsa-miR-6816-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6737-5p 1 1 0
chr14:67471724|67471877 hsa-miR-6752-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6756-5p 1 1 0
chr14:67471724|67471877 hsa-miR-6819-5p 1 1 0
chr14:67471724|67471877 hsa-miR-10401-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6722-3p 1 0 0
chr14:67471724|67471877 hsa-miR-6852-3p 0 1 0
chr14:67471724|67471877 hsa-miR-3620-5p 1 0 0
chr14:67471724|67471877 hsa-miR-1909-3p 1 0 0
chr14:67471724|67471877 hsa-miR-328-5p 1 0 0
chr14:67471724|67471877 hsa-miR-675-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6777-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6799-3p 0 1 0
chr14:67471724|67471877 hsa-miR-4664-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6855-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6766-5p 1 0 0
chr14:67471724|67471877 hsa-miR-6893-3p 0 1 0
chr14:67471724|67471877 hsa-miR-3085-3p 0 1 0
chr14:67471724|67471877 hsa-miR-6504-5p 0 1 0
chr14:67471724|67471877 hsa-miR-624-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:67471724|67471877
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MHPTTPCTVWAGQPAGKRTFSPQVIPSLCNDP
Nucleotide Sequence CTGCACCCCACCACACCCTGCACAGTATGGGCAGGGCAGCCAGCAGGGAAGAGGACATTCTCTCCACAGGTGATACCGTCACTTTGTAATGATCCATAA
CircID chr14:67471724|67471877
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MWPTPPHPAPHHTLHSMGRAASREEDILSTGDTVTL
Nucleotide Sequence CTGTGGCCCACCCCACCACACCCTGCACCCCACCACACCCTGCACAGTATGGGCAGGGCAGCCAGCAGGGAAGAGGACATTCTCTCCACAGGTGATACCGTCACTTTGTAA
CircID chr14:67471724|67471877
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MDHYKVTVSPVERMSSSLLAALPILCRVWWGAGCGGVGHSCVL
Nucleotide Sequence ATGGATCATTACAAAGTGACGGTATCACCTGTGGAGAGAATGTCCTCTTCCCTGCTGGCTGCCCTGCCCATACTGTGCAGGGTGTGGTGGGGTGCAGGGTGTGGTGGGGTGGGCCACAGTTGTGTCCTA
CircID chr14:67471724|67471877
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MWRECPLPCWLPCPYCAGCGGVQGVVGWATVVS
Nucleotide Sequence CTGTGGAGAGAATGTCCTCTTCCCTGCTGGCTGCCCTGCCCATACTGTGCAGGGTGTGGTGGGGTGCAGGGTGTGGTGGGGTGGGCCACAGTTGTGTCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab