CircRNA Information

General Information
circRNA Basic Information
CircID chr14:67750112|67750372
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGGCGTCTGTCCTGGCTGTTAGGTTCTCAGTCTGACTCTAGAAAAGTAATTCTCTACATTTCAGGATGTCAGAATTTCATCCTTTCTGACATCATCATGATGTTACAGAAATAAATGAAGAAATGTTTAGAACTTATTCTCCTTAACCCTGGAGACTGAAAAATGCCCATTAAGTTCAGTCCCAGGATTAGCAATACTGCCATGGGGAGCGTGTAAGAAGCTCTTTGCCTGACGTCAGTTTTCATCACAGGGGACTCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:67750112|67750372 hsa-miR-34a-5p 0 0 1
chr14:67750112|67750372 hsa-miR-34a-3p 0 0 1
chr14:67750112|67750372 hsa-miR-137-5p 0 0 1
chr14:67750112|67750372 hsa-miR-137-3p 0 0 1
chr14:67750112|67750372 hsa-miR-146a-5p 0 0 1
chr14:67750112|67750372 hsa-miR-146a-3p 0 0 1
chr14:67750112|67750372 hsa-miR-449a 0 0 1
chr14:67750112|67750372 hsa-miR-433-5p 0 0 1
chr14:67750112|67750372 hsa-miR-433-3p 0 0 1
chr14:67750112|67750372 hsa-miR-489-5p 0 0 1
chr14:67750112|67750372 hsa-miR-489-3p 0 0 1
chr14:67750112|67750372 hsa-miR-570-5p 0 0 1
chr14:67750112|67750372 hsa-miR-570-3p 0 0 1
chr14:67750112|67750372 hsa-miR-579-5p 0 0 1
chr14:67750112|67750372 hsa-miR-579-3p 0 0 1
chr14:67750112|67750372 hsa-miR-589-5p 0 0 1
chr14:67750112|67750372 hsa-miR-589-3p 0 0 1
chr14:67750112|67750372 hsa-miR-600 0 0 1
chr14:67750112|67750372 hsa-miR-622 0 0 1
chr14:67750112|67750372 hsa-miR-449b-5p 0 0 1
chr14:67750112|67750372 hsa-miR-449b-3p 0 0 1
chr14:67750112|67750372 hsa-miR-766-5p 0 0 1
chr14:67750112|67750372 hsa-miR-766-3p 0 0 1
chr14:67750112|67750372 hsa-miR-548e-5p 0 0 1
chr14:67750112|67750372 hsa-miR-548e-3p 0 0 1
chr14:67750112|67750372 hsa-miR-1272 0 1 1
chr14:67750112|67750372 hsa-miR-1276 0 0 1
chr14:67750112|67750372 hsa-miR-331-3p 0 0 1
chr14:67750112|67750372 hsa-miR-518d-5p 0 0 1
chr14:67750112|67750372 hsa-miR-519b-5p 0 0 1
chr14:67750112|67750372 hsa-miR-519c-5p 0 0 1
chr14:67750112|67750372 hsa-miR-520c-5p 0 0 1
chr14:67750112|67750372 hsa-miR-34c-5p 0 0 1
chr14:67750112|67750372 hsa-miR-146b-5p 0 0 1
chr14:67750112|67750372 hsa-miR-548a-3p 0 0 1
chr14:67750112|67750372 hsa-miR-548f 0 0 1
chr14:67750112|67750372 hsa-miR-500 0 0 1
chr14:67750112|67750372 hsa-miR-526a 0 0 1
chr14:67750112|67750372 hsa-miR-203 0 0 1
chr14:67750112|67750372 hsa-miR-194 0 0 1
chr14:67750112|67750372 hsa-miR-4436a 0 1 0
chr14:67750112|67750372 hsa-miR-4494 0 1 0
chr14:67750112|67750372 hsa-miR-4513 1 0 0
chr14:67750112|67750372 hsa-miR-4526 1 0 0
chr14:67750112|67750372 hsa-miR-8052 0 1 0
chr14:67750112|67750372 hsa-miR-12113 0 1 0
chr14:67750112|67750372 hsa-miR-103a-2-5p 0 1 0
chr14:67750112|67750372 hsa-miR-1343-3p 0 1 0
chr14:67750112|67750372 hsa-miR-4757-3p 1 1 0
chr14:67750112|67750372 hsa-miR-4740-5p 1 1 0
chr14:67750112|67750372 hsa-miR-5003-3p 0 1 0
chr14:67750112|67750372 hsa-miR-4742-5p 1 1 0
chr14:67750112|67750372 hsa-miR-6812-5p 1 0 0
chr14:67750112|67750372 hsa-miR-4757-5p 1 0 0
chr14:67750112|67750372 hsa-miR-103a-1-5p 0 1 0
chr14:67750112|67750372 hsa-miR-3913-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:67750112|67750372
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence METEKCPLSSVPGLAILPWGACKKLFA
Nucleotide Sequence CTGGAGACTGAAAAATGCCCATTAAGTTCAGTCCCAGGATTAGCAATACTGCCATGGGGAGCGTGTAAGAAGCTCTTTGCCTGA

CircID chr14:67750112|67750372
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MSWLLGSQSDSRKVILYISGCQNFILSDIIMMLQK
Nucleotide Sequence CTGTCCTGGCTGTTAGGTTCTCAGTCTGACTCTAGAAAAGTAATTCTCTACATTTCAGGATGTCAGAATTTCATCCTTTCTGACATCATCATGATGTTACAGAAATAA

CircID chr14:67750112|67750372
ORF Type ORF3
Protein Length 58
Nucleotide Length 177
Protein Sequence MKTDVRQRASYTLPMAVLLILGLNLMGIFQSPGLRRISSKHFFIYFCNIMMMSERMKF
Nucleotide Sequence ATGAAAACTGACGTCAGGCAAAGAGCTTCTTACACGCTCCCCATGGCAGTATTGCTAATCCTGGGACTGAACTTAATGGGCATTTTTCAGTCTCCAGGGTTAAGGAGAATAAGTTCTAAACATTTCTTCATTTATTTCTGTAACATCATGATGATGTCAGAAAGGATGAAATTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites