CircRNA Information

General Information
circRNA Basic Information
CircID chr14:69380178|69380423
Strand -
CircType exon
Host Gene ENSG00000100632.9;
Algorism CIRI2;
Sequence ATGGCTAAACTGCATTTCCACCCCCCACCCCATCTTGAAGAAGGGTTAGTATGTGAATGTTATAAAGTAGATATGAACAGTTGAAGGACTGGAACCAACATTAAGTGACGAAGAACAACTTCCATCTAAATCATCATAAAAATGTTTAAGTAAAAAAAAAAAAAGAAAGAGAAAGAAAAAGAGGAGGTAACGGGGGTTTCCGATTGAACAAGATCCTCACATTTCATCTAATACAGTCAATCTTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:69380178|69380423 hsa-miR-23a-5p 0 0 1
chr14:69380178|69380423 hsa-miR-23a-3p 0 0 1
chr14:69380178|69380423 hsa-miR-181c-5p 0 0 1
chr14:69380178|69380423 hsa-miR-181c-3p 0 0 1
chr14:69380178|69380423 hsa-miR-205-5p 0 0 1
chr14:69380178|69380423 hsa-miR-205-3p 0 0 1
chr14:69380178|69380423 hsa-miR-23b-5p 0 0 1
chr14:69380178|69380423 hsa-miR-23b-3p 0 0 1
chr14:69380178|69380423 hsa-miR-382-5p 0 0 1
chr14:69380178|69380423 hsa-miR-382-3p 0 0 1
chr14:69380178|69380423 hsa-miR-181d-5p 0 0 1
chr14:69380178|69380423 hsa-miR-181d-3p 0 0 1
chr14:69380178|69380423 hsa-miR-608 0 1 1
chr14:69380178|69380423 hsa-miR-659-5p 0 0 1
chr14:69380178|69380423 hsa-miR-659-3p 0 0 1
chr14:69380178|69380423 hsa-miR-543 0 1 1
chr14:69380178|69380423 hsa-miR-943 0 0 1
chr14:69380178|69380423 hsa-miR-1206 0 0 1
chr14:69380178|69380423 hsa-miR-1294 0 0 1
chr14:69380178|69380423 hsa-miR-1248 0 0 1
chr14:69380178|69380423 hsa-miR-1272 0 1 1
chr14:69380178|69380423 hsa-miR-1322 0 0 1
chr14:69380178|69380423 hsa-miR-145-5p 0 0 1
chr14:69380178|69380423 hsa-miR-409-3p 0 0 1
chr14:69380178|69380423 hsa-miR-342-5p 0 0 1
chr14:69380178|69380423 hsa-miR-181a 0 0 1
chr14:69380178|69380423 hsa-miR-181b 0 0 1
chr14:69380178|69380423 hsa-miR-203 0 0 1
chr14:69380178|69380423 hsa-miR-1185 0 0 1
chr14:69380178|69380423 hsa-miR-4651 1 1 0
chr14:69380178|69380423 hsa-miR-5093 0 1 0
chr14:69380178|69380423 hsa-miR-6070 1 0 0
chr14:69380178|69380423 hsa-miR-6745 0 1 0
chr14:69380178|69380423 hsa-miR-153-5p 0 1 0
chr14:69380178|69380423 hsa-miR-6747-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6890-5p 0 1 0
chr14:69380178|69380423 hsa-miR-4677-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6732-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6782-5p 1 0 0
chr14:69380178|69380423 hsa-miR-7109-5p 1 1 0
chr14:69380178|69380423 hsa-miR-4787-5p 1 0 0
chr14:69380178|69380423 hsa-miR-605-5p 0 1 0
chr14:69380178|69380423 hsa-miR-1910-5p 0 1 0
chr14:69380178|69380423 hsa-miR-5088-3p 0 1 0
chr14:69380178|69380423 hsa-miR-6812-5p 1 1 0
chr14:69380178|69380423 hsa-miR-6752-5p 1 1 0
chr14:69380178|69380423 hsa-miR-6756-5p 1 1 0
chr14:69380178|69380423 hsa-miR-6769a-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6803-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6819-5p 1 1 0
chr14:69380178|69380423 hsa-miR-6842-5p 1 0 0
chr14:69380178|69380423 hsa-miR-7111-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6846-5p 1 0 0
chr14:69380178|69380423 hsa-miR-6848-5p 1 0 0
chr14:69380178|69380423 hsa-miR-4472 0 1 0
chr14:69380178|69380423 hsa-miR-6771-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:69380178|69380423
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MAKLHFHPPPHLEEGLVCECYKVDMNS
Nucleotide Sequence ATGGCTAAACTGCATTTCCACCCCCCACCCCATCTTGAAGAAGGGTTAGTATGTGAATGTTATAAAGTAGATATGAACAGTTGA
CircID chr14:69380178|69380423
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MKCEDLVQSETPVTSSFSFSFFFFFYLNIFMMI
Nucleotide Sequence ATGAAATGTGAGGATCTTGTTCAATCGGAAACCCCCGTTACCTCCTCTTTTTCTTTCTCTTTCTTTTTTTTTTTTTACTTAAACATTTTTATGATGATTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab