CircRNA Information

General Information
circRNA Basic Information
CircID chr14:69712506|69712687
Strand -
CircType exon
Host Gene ENSG00000100647.7;
Algorism CIRI2;
Sequence TTCGAAGCGGACCCTGTGCTGCATGTCTGCTCCTCCCCTGAGCCTGTCTGCTTGGGGGTGGTAAAAATAAAAATCCCAGTTTATTTTCAGTACCTTACCTAACAGGGTTGGCTCCAGGCGTGGGTGGCCTAGAAGATGAGGGGAGTGGTCTTCTCCCAGCCTTTTACCCTCTTGCCTCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:69712506|69712687 hsa-miR-31-5p 0 0 1
chr14:69712506|69712687 hsa-miR-31-3p 0 0 1
chr14:69712506|69712687 hsa-miR-107 0 0 1
chr14:69712506|69712687 hsa-miR-10a-5p 0 0 1
chr14:69712506|69712687 hsa-miR-10a-3p 0 0 1
chr14:69712506|69712687 hsa-miR-10b-5p 0 0 1
chr14:69712506|69712687 hsa-miR-10b-3p 0 0 1
chr14:69712506|69712687 hsa-miR-484 0 1 1
chr14:69712506|69712687 hsa-miR-645 0 0 1
chr14:69712506|69712687 hsa-miR-650 0 0 1
chr14:69712506|69712687 hsa-miR-765 0 1 1
chr14:69712506|69712687 hsa-miR-1290 0 0 1
chr14:69712506|69712687 hsa-miR-1253 0 0 1
chr14:69712506|69712687 hsa-miR-1258 0 0 1
chr14:69712506|69712687 hsa-miR-548g-5p 0 0 1
chr14:69712506|69712687 hsa-miR-548g-3p 0 0 1
chr14:69712506|69712687 hsa-miR-1266-5p 0 0 1
chr14:69712506|69712687 hsa-miR-1266-3p 0 0 1
chr14:69712506|69712687 hsa-miR-1324 0 0 1
chr14:69712506|69712687 hsa-miR-331-5p 0 0 1
chr14:69712506|69712687 hsa-miR-103 0 0 1
chr14:69712506|69712687 hsa-miR-1274b 0 0 1
chr14:69712506|69712687 hsa-miR-220c 0 0 1
chr14:69712506|69712687 hsa-miR-1254 0 0 1
chr14:69712506|69712687 hsa-miR-24 0 0 1
chr14:69712506|69712687 hsa-miR-940 1 0 0
chr14:69712506|69712687 hsa-miR-3166 0 1 0
chr14:69712506|69712687 hsa-miR-4254 0 1 0
chr14:69712506|69712687 hsa-miR-4505 0 1 0
chr14:69712506|69712687 hsa-miR-4518 0 1 0
chr14:69712506|69712687 hsa-miR-4539 1 0 0
chr14:69712506|69712687 hsa-miR-3972 1 0 0
chr14:69712506|69712687 hsa-miR-4739 1 0 0
chr14:69712506|69712687 hsa-miR-5090 1 0 0
chr14:69712506|69712687 hsa-miR-5681b 1 0 0
chr14:69712506|69712687 hsa-miR-5704 0 1 0
chr14:69712506|69712687 hsa-miR-6078 1 0 0
chr14:69712506|69712687 hsa-miR-6081 0 1 0
chr14:69712506|69712687 hsa-miR-6165 0 1 0
chr14:69712506|69712687 hsa-miR-7106-5p 0 1 0
chr14:69712506|69712687 hsa-miR-6825-5p 1 1 0
chr14:69712506|69712687 hsa-miR-6720-5p 1 0 0
chr14:69712506|69712687 hsa-miR-125a-3p 1 0 0
chr14:69712506|69712687 hsa-miR-4695-5p 0 1 0
chr14:69712506|69712687 hsa-miR-24-3p 0 1 0
chr14:69712506|69712687 hsa-miR-197-5p 1 0 0
chr14:69712506|69712687 hsa-miR-6732-5p 1 1 0
chr14:69712506|69712687 hsa-miR-486-3p 1 0 0
chr14:69712506|69712687 hsa-miR-3194-5p 1 0 0
chr14:69712506|69712687 hsa-miR-30c-2-3p 1 1 0
chr14:69712506|69712687 hsa-miR-4715-3p 0 1 0
chr14:69712506|69712687 hsa-miR-6824-5p 1 0 0
chr14:69712506|69712687 hsa-miR-6826-3p 0 1 0
chr14:69712506|69712687 hsa-miR-6777-3p 1 0 0
chr14:69712506|69712687 hsa-miR-6767-5p 0 1 0
chr14:69712506|69712687 hsa-miR-2681-5p 0 1 0
chr14:69712506|69712687 hsa-miR-4717-5p 1 1 0
chr14:69712506|69712687 hsa-miR-6841-5p 0 1 0
chr14:69712506|69712687 hsa-miR-4524b-3p 0 1 0
chr14:69712506|69712687 hsa-miR-6893-5p 1 0 0
chr14:69712506|69712687 hsa-miR-6788-5p 0 1 0
chr14:69712506|69712687 hsa-miR-7111-5p 0 1 0
chr14:69712506|69712687 hsa-miR-4728-5p 1 1 0
chr14:69712506|69712687 hsa-miR-6735-5p 1 0 0
chr14:69712506|69712687 hsa-miR-30c-1-3p 0 1 0
chr14:69712506|69712687 hsa-miR-6891-3p 0 1 0
chr14:69712506|69712687 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:69712506|69712687
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MHVCSSPEPVCLGVVKIKIPVYFQYLT
Nucleotide Sequence CTGCATGTCTGCTCCTCCCCTGAGCCTGTCTGCTTGGGGGTGGTAAAAATAAAAATCCCAGTTTATTTTCAGTACCTTACCTAA

CircID chr14:69712506|69712687
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MLGGGKNKNPSLFSVPYLTGLAPGVGGLEDEGSGLLPAFYPLASC
Nucleotide Sequence CTGCTTGGGGGTGGTAAAAATAAAAATCCCAGTTTATTTTCAGTACCTTACCTAACAGGGTTGGCTCCAGGCGTGGGTGGCCTAGAAGATGAGGGGAGTGGTCTTCTCCCAGCCTTTTACCCTCTTGCCTCCTGC

CircID chr14:69712506|69712687
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MGFLFLPPPSRQAQGRSRHAAQGPLR
Nucleotide Sequence CTGGGATTTTTATTTTTACCACCCCCAAGCAGACAGGCTCAGGGGAGGAGCAGACATGCAGCACAGGGTCCGCTTCGA

CircID chr14:69712506|69712687
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MGEDHSPHLLGHPRLEPTLLGKVLKINWDFYFYHPQADRLRGGADMQHRVRFE
Nucleotide Sequence CTGGGAGAAGACCACTCCCCTCATCTTCTAGGCCACCCACGCCTGGAGCCAACCCTGTTAGGTAAGGTACTGAAAATAAACTGGGATTTTTATTTTTACCACCCCCAAGCAGACAGGCTCAGGGGAGGAGCAGACATGCAGCACAGGGTCCGCTTCGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites