CircRNA Information

General Information
circRNA Basic Information
CircID chr14:69713550|69713693
Strand +
CircType exon
Host Gene ENSG00000100647.7;
Algorism CIRI2;
Sequence CTGTTTCCACCTGCTCCAGGCTCCTCAGGCAGCCTGTCTTTTAACAGCCTGCCACCTGCTGCTACCCTTGTCTCTCAGCCAGGCCCTACCTCAAGGCAGCTGTGGAGTCCCTAATCTCTCAGTAAGGGACAAAGCCCAGAAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:69713550|69713693 hsa-let-7b-5p 0 0 1
chr14:69713550|69713693 hsa-let-7b-3p 0 0 1
chr14:69713550|69713693 hsa-let-7c-5p 0 0 1
chr14:69713550|69713693 hsa-let-7c-3p 0 0 1
chr14:69713550|69713693 hsa-let-7d-5p 0 0 1
chr14:69713550|69713693 hsa-let-7d-3p 0 0 1
chr14:69713550|69713693 hsa-let-7e-5p 0 0 1
chr14:69713550|69713693 hsa-let-7e-3p 0 0 1
chr14:69713550|69713693 hsa-miR-15a-5p 0 0 1
chr14:69713550|69713693 hsa-miR-15a-3p 0 0 1
chr14:69713550|69713693 hsa-miR-22-5p 0 0 1
chr14:69713550|69713693 hsa-miR-22-3p 0 0 1
chr14:69713550|69713693 hsa-miR-98-5p 0 0 1
chr14:69713550|69713693 hsa-miR-98-3p 0 0 1
chr14:69713550|69713693 hsa-miR-214-5p 0 0 1
chr14:69713550|69713693 hsa-miR-214-3p 0 0 1
chr14:69713550|69713693 hsa-let-7g-5p 0 0 1
chr14:69713550|69713693 hsa-let-7g-3p 0 0 1
chr14:69713550|69713693 hsa-let-7i-5p 0 0 1
chr14:69713550|69713693 hsa-let-7i-3p 0 0 1
chr14:69713550|69713693 hsa-miR-15b-5p 0 0 1
chr14:69713550|69713693 hsa-miR-15b-3p 0 0 1
chr14:69713550|69713693 hsa-miR-195-5p 0 0 1
chr14:69713550|69713693 hsa-miR-195-3p 0 0 1
chr14:69713550|69713693 hsa-miR-424-5p 0 0 1
chr14:69713550|69713693 hsa-miR-424-3p 0 0 1
chr14:69713550|69713693 hsa-miR-202-5p 0 0 1
chr14:69713550|69713693 hsa-miR-202-3p 0 0 1
chr14:69713550|69713693 hsa-miR-497-5p 0 0 1
chr14:69713550|69713693 hsa-miR-497-3p 0 0 1
chr14:69713550|69713693 hsa-miR-503-5p 0 0 1
chr14:69713550|69713693 hsa-miR-503-3p 0 0 1
chr14:69713550|69713693 hsa-miR-612 1 0 1
chr14:69713550|69713693 hsa-miR-646 0 0 1
chr14:69713550|69713693 hsa-miR-1296-5p 0 0 1
chr14:69713550|69713693 hsa-miR-1296-3p 0 0 1
chr14:69713550|69713693 hsa-miR-1207-5p 1 0 1
chr14:69713550|69713693 hsa-miR-16 0 0 1
chr14:69713550|69713693 hsa-let-7a 0 0 1
chr14:69713550|69713693 hsa-let-7f 0 0 1
chr14:69713550|69713693 hsa-miR-1285 0 0 1
chr14:69713550|69713693 hsa-miR-1254 0 0 1
chr14:69713550|69713693 hsa-miR-1201 0 0 1
chr14:69713550|69713693 hsa-miR-663a 1 0 0
chr14:69713550|69713693 hsa-miR-762 1 0 0
chr14:69713550|69713693 hsa-miR-761 0 1 0
chr14:69713550|69713693 hsa-miR-1182 1 0 0
chr14:69713550|69713693 hsa-miR-1268a 1 0 0
chr14:69713550|69713693 hsa-miR-2861 1 1 0
chr14:69713550|69713693 hsa-miR-4294 1 0 0
chr14:69713550|69713693 hsa-miR-3665 0 1 0
chr14:69713550|69713693 hsa-miR-1268b 1 0 0
chr14:69713550|69713693 hsa-miR-4438 0 1 0
chr14:69713550|69713693 hsa-miR-4458 1 0 0
chr14:69713550|69713693 hsa-miR-4656 1 0 0
chr14:69713550|69713693 hsa-miR-4689 1 1 0
chr14:69713550|69713693 hsa-miR-5572 1 0 0
chr14:69713550|69713693 hsa-miR-5787 1 0 0
chr14:69713550|69713693 hsa-miR-6069 1 0 0
chr14:69713550|69713693 hsa-miR-6085 1 0 0
chr14:69713550|69713693 hsa-miR-6086 1 0 0
chr14:69713550|69713693 hsa-miR-6734-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6765-5p 1 0 0
chr14:69713550|69713693 hsa-miR-4687-3p 1 1 0
chr14:69713550|69713693 hsa-miR-125a-3p 1 0 0
chr14:69713550|69713693 hsa-miR-6799-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6804-5p 0 1 0
chr14:69713550|69713693 hsa-miR-3622a-5p 1 0 0
chr14:69713550|69713693 hsa-miR-1227-5p 1 0 0
chr14:69713550|69713693 hsa-miR-3192-5p 1 1 0
chr14:69713550|69713693 hsa-miR-4722-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6890-5p 1 0 0
chr14:69713550|69713693 hsa-miR-3928-3p 1 0 0
chr14:69713550|69713693 hsa-miR-197-5p 1 0 0
chr14:69713550|69713693 hsa-miR-3151-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6732-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6827-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6882-3p 0 1 0
chr14:69713550|69713693 hsa-miR-6786-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6835-5p 1 0 0
chr14:69713550|69713693 hsa-miR-1229-5p 1 1 0
chr14:69713550|69713693 hsa-miR-4640-5p 1 0 0
chr14:69713550|69713693 hsa-miR-4690-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6749-5p 1 1 0
chr14:69713550|69713693 hsa-miR-4446-3p 1 0 0
chr14:69713550|69713693 hsa-miR-6895-5p 1 0 0
chr14:69713550|69713693 hsa-miR-7160-3p 1 0 0
chr14:69713550|69713693 hsa-miR-423-5p 1 0 0
chr14:69713550|69713693 hsa-miR-532-5p 1 1 0
chr14:69713550|69713693 hsa-miR-2114-3p 1 0 0
chr14:69713550|69713693 hsa-miR-6761-5p 0 1 0
chr14:69713550|69713693 hsa-miR-4763-3p 1 0 0
chr14:69713550|69713693 hsa-miR-6865-5p 0 1 0
chr14:69713550|69713693 hsa-miR-6893-5p 1 0 0
chr14:69713550|69713693 hsa-miR-1343-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6743-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6813-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6815-5p 1 1 0
chr14:69713550|69713693 hsa-miR-6851-5p 1 0 0
chr14:69713550|69713693 hsa-miR-7107-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6875-5p 1 0 0
chr14:69713550|69713693 hsa-miR-5196-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6780b-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6836-5p 1 0 0
chr14:69713550|69713693 hsa-miR-10396b-5p 1 0 0
chr14:69713550|69713693 hsa-miR-328-5p 1 0 0
chr14:69713550|69713693 hsa-miR-4632-5p 1 0 0
chr14:69713550|69713693 hsa-miR-4685-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6846-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6848-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6858-5p 1 1 0
chr14:69713550|69713693 hsa-miR-6845-5p 1 0 0
chr14:69713550|69713693 hsa-miR-939-5p 1 0 0
chr14:69713550|69713693 hsa-miR-3116 0 1 0
chr14:69713550|69713693 hsa-miR-6785-5p 1 0 0
chr14:69713550|69713693 hsa-miR-3184-5p 1 0 0
chr14:69713550|69713693 hsa-miR-6791-5p 1 0 0
chr14:69713550|69713693 hsa-miR-3619-5p 1 1 0
chr14:69713550|69713693 hsa-miR-6504-5p 0 1 0
chr14:69713550|69713693 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:69713550|69713693
ORF Type ORF1
Protein Length 37
Nucleotide Length 114
Protein Sequence LFPPAPGSSGSLSFNSLPPAATLVSQPGPTSRQLWSP
Nucleotide Sequence CTGTTTCCACCTGCTCCAGGCTCCTCAGGCAGCCTGTCTTTTAACAGCCTGCCACCTGCTGCTACCCTTGTCTCTCAGCCAGGCCCTACCTCAAGGCAGCTGTGGAGTCCCTAA
CircID chr14:69713550|69713693
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MLQAPQAACLLTACHLLLPLSLSQALPQGSCGVPNLSVRDKAQK
Nucleotide Sequence CTGCTCCAGGCTCCTCAGGCAGCCTGTCTTTTAACAGCCTGCCACCTGCTGCTACCCTTGTCTCTCAGCCAGGCCCTACCTCAAGGCAGCTGTGGAGTCCCTAATCTCTCAGTAAGGGACAAAGCCCAGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab