CircRNA Information

General Information
circRNA Basic Information
CircID chr14:71349886|71350026
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCCTGCCCTCCCCACCCTACTCTATTTTCCCTTAGTCTCTTCAGATTTTAGAAGCAGTATCACCTCTTCAAAAGATGTCCTATTCTCCACATCCTCCCCAGTGTCACAAGAGCACTCCTTAACCAGGTTCCTAGGCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:71349886|71350026 hsa-miR-519e-5p 0 0 1
chr14:71349886|71350026 hsa-miR-519e-3p 0 0 1
chr14:71349886|71350026 hsa-miR-581 0 0 1
chr14:71349886|71350026 hsa-miR-758-5p 0 0 1
chr14:71349886|71350026 hsa-miR-758-3p 0 0 1
chr14:71349886|71350026 hsa-miR-939-5p 0 0 1
chr14:71349886|71350026 hsa-miR-939-3p 0 0 1
chr14:71349886|71350026 hsa-miR-1265 0 0 1
chr14:71349886|71350026 hsa-miR-1197 0 0 1
chr14:71349886|71350026 hsa-miR-491-5p 0 0 1
chr14:71349886|71350026 hsa-miR-490-3p 0 0 1
chr14:71349886|71350026 hsa-miR-515-3p 0 0 1
chr14:71349886|71350026 hsa-miR-542-3p 0 0 1
chr14:71349886|71350026 hsa-miR-765 1 0 0
chr14:71349886|71350026 hsa-miR-760 1 0 0
chr14:71349886|71350026 hsa-miR-936 1 0 0
chr14:71349886|71350026 hsa-miR-3153 1 1 0
chr14:71349886|71350026 hsa-miR-4298 1 0 0
chr14:71349886|71350026 hsa-miR-4259 1 0 0
chr14:71349886|71350026 hsa-miR-4270 1 0 0
chr14:71349886|71350026 hsa-miR-4271 1 0 0
chr14:71349886|71350026 hsa-miR-4428 1 0 0
chr14:71349886|71350026 hsa-miR-4450 1 0 0
chr14:71349886|71350026 hsa-miR-4463 1 0 0
chr14:71349886|71350026 hsa-miR-4481 1 0 0
chr14:71349886|71350026 hsa-miR-4499 1 0 0
chr14:71349886|71350026 hsa-miR-2392 1 0 0
chr14:71349886|71350026 hsa-miR-4516 1 0 0
chr14:71349886|71350026 hsa-miR-4525 1 0 0
chr14:71349886|71350026 hsa-miR-4689 1 0 0
chr14:71349886|71350026 hsa-miR-4721 1 0 0
chr14:71349886|71350026 hsa-miR-4739 1 0 0
chr14:71349886|71350026 hsa-miR-4784 1 0 0
chr14:71349886|71350026 hsa-miR-5192 1 0 0
chr14:71349886|71350026 hsa-miR-5572 1 0 0
chr14:71349886|71350026 hsa-miR-5739 1 0 0
chr14:71349886|71350026 hsa-miR-5787 1 0 0
chr14:71349886|71350026 hsa-miR-6088 1 0 0
chr14:71349886|71350026 hsa-miR-6124 1 0 0
chr14:71349886|71350026 hsa-miR-6127 1 0 0
chr14:71349886|71350026 hsa-miR-6860 1 0 0
chr14:71349886|71350026 hsa-miR-7515 1 0 0
chr14:71349886|71350026 hsa-miR-8089 1 1 0
chr14:71349886|71350026 hsa-miR-12119 1 0 0
chr14:71349886|71350026 hsa-miR-12131 1 1 0
chr14:71349886|71350026 hsa-miR-4433b-3p 1 1 0
chr14:71349886|71350026 hsa-miR-4433a-3p 1 0 0
chr14:71349886|71350026 hsa-miR-7106-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6825-5p 1 1 0
chr14:71349886|71350026 hsa-miR-6894-5p 1 1 0
chr14:71349886|71350026 hsa-miR-6799-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6833-5p 1 0 0
chr14:71349886|71350026 hsa-miR-5187-5p 1 0 0
chr14:71349886|71350026 hsa-miR-7114-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6515-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6873-5p 1 0 0
chr14:71349886|71350026 hsa-miR-7847-3p 1 0 0
chr14:71349886|71350026 hsa-miR-6746-5p 1 0 0
chr14:71349886|71350026 hsa-miR-4709-3p 1 1 0
chr14:71349886|71350026 hsa-miR-197-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6742-5p 1 0 0
chr14:71349886|71350026 hsa-miR-3605-5p 0 1 0
chr14:71349886|71350026 hsa-miR-3180-3p 1 0 0
chr14:71349886|71350026 hsa-miR-6796-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6760-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6782-5p 1 0 0
chr14:71349886|71350026 hsa-miR-7109-5p 1 0 0
chr14:71349886|71350026 hsa-miR-1226-5p 1 0 0
chr14:71349886|71350026 hsa-miR-1229-5p 1 1 0
chr14:71349886|71350026 hsa-miR-4764-5p 1 1 0
chr14:71349886|71350026 hsa-miR-296-3p 1 0 0
chr14:71349886|71350026 hsa-miR-4732-5p 1 0 0
chr14:71349886|71350026 hsa-miR-149-3p 1 0 0
chr14:71349886|71350026 hsa-miR-6717-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6824-5p 1 0 0
chr14:71349886|71350026 hsa-miR-3162-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6892-5p 1 1 0
chr14:71349886|71350026 hsa-miR-873-3p 1 0 0
chr14:71349886|71350026 hsa-miR-5197-3p 1 0 0
chr14:71349886|71350026 hsa-miR-3121-3p 1 1 0
chr14:71349886|71350026 hsa-miR-6769b-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6812-5p 0 1 0
chr14:71349886|71350026 hsa-miR-6870-5p 1 0 0
chr14:71349886|71350026 hsa-miR-1343-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6756-5p 1 1 0
chr14:71349886|71350026 hsa-miR-6803-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6819-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6851-5p 1 0 0
chr14:71349886|71350026 hsa-miR-11181-3p 1 0 0
chr14:71349886|71350026 hsa-miR-1249-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6763-5p 1 1 0
chr14:71349886|71350026 hsa-miR-6788-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6797-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6879-5p 1 0 0
chr14:71349886|71350026 hsa-miR-7111-5p 1 0 0
chr14:71349886|71350026 hsa-miR-4728-5p 1 1 0
chr14:71349886|71350026 hsa-miR-5196-5p 1 0 0
chr14:71349886|71350026 hsa-miR-328-5p 1 0 0
chr14:71349886|71350026 hsa-miR-4745-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6795-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6848-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6858-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6883-5p 1 1 0
chr14:71349886|71350026 hsa-miR-6887-5p 1 0 0
chr14:71349886|71350026 hsa-miR-3187-5p 1 0 0
chr14:71349886|71350026 hsa-miR-4758-5p 1 0 0
chr14:71349886|71350026 hsa-miR-4769-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6511a-5p 1 0 0
chr14:71349886|71350026 hsa-miR-4700-5p 0 1 0
chr14:71349886|71350026 hsa-miR-3679-5p 1 0 0
chr14:71349886|71350026 hsa-miR-6785-5p 1 1 0
chr14:71349886|71350026 hsa-miR-4667-5p 1 1 0
chr14:71349886|71350026 hsa-miR-342-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:71349886|71350026
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence LPALPTLLYFPLVSSDFRSSITSSKDVLFSTSSPVSQEHSLTRFLGT
Nucleotide Sequence CTGCCTGCCCTCCCCACCCTACTCTATTTTCCCTTAGTCTCTTCAGATTTTAGAAGCAGTATCACCTCTTCAAAAGATGTCCTATTCTCCACATCCTCCCCAGTGTCACAAGAGCACTCCTTAACCAGGTTCCTAGGCACT
CircID chr14:71349886|71350026
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MVKECSCDTGEDVENRTSFEEVILLLKSEETKGK
Nucleotide Sequence CTGGTTAAGGAGTGCTCTTGTGACACTGGGGAGGATGTGGAGAATAGGACATCTTTTGAAGAGGTGATACTGCTTCTAAAATCTGAAGAGACTAAGGGAAAATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab