CircRNA Information

General Information
circRNA Basic Information
CircID chr14:74292287|74292572
Strand -
CircType exon
Host Gene ENSG00000119688.19;
Algorism CIRI2;
Sequence GTGTCCAAGCCCCACTCGCTCTCGCCCAGGATCTCGCAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGAACAAGAAAAGAAAATCTGAGGCAGGGTCTGGGAGCCAGGTGAAGGTGAACTCCTTTTCCTATCTCACACCCACGAGTACATGGTATGTCTCTGTTCCTTTTTTCACTCAGCCACTTCTGCCAGCAGCACACACTTTGCTCAGGAGCCAGAGGGGTGGGACACGGCCTCACCTGTGCGTGTAGCCAGCCACAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:74292287|74292572 hsa-miR-224-5p 0 0 1
chr14:74292287|74292572 hsa-miR-224-3p 0 0 1
chr14:74292287|74292572 hsa-miR-149-5p 0 0 1
chr14:74292287|74292572 hsa-miR-149-3p 0 0 1
chr14:74292287|74292572 hsa-miR-422a -4 0 1
chr14:74292287|74292572 hsa-miR-412-5p 0 0 1
chr14:74292287|74292572 hsa-miR-412-3p 0 0 1
chr14:74292287|74292572 hsa-miR-520g-5p 0 0 1
chr14:74292287|74292572 hsa-miR-520g-3p 0 0 1
chr14:74292287|74292572 hsa-miR-520h -1 0 1
chr14:74292287|74292572 hsa-miR-504-5p 0 0 1
chr14:74292287|74292572 hsa-miR-504-3p 0 0 1
chr14:74292287|74292572 hsa-miR-552-5p 0 0 1
chr14:74292287|74292572 hsa-miR-552-3p 0 0 1
chr14:74292287|74292572 hsa-miR-578 -9 0 1
chr14:74292287|74292572 hsa-miR-595 -6 0 1
chr14:74292287|74292572 hsa-miR-609 -6 0 1
chr14:74292287|74292572 hsa-miR-298 -13 0 1
chr14:74292287|74292572 hsa-miR-1200 -8 1 1
chr14:74292287|74292572 hsa-miR-1299 -10 0 1
chr14:74292287|74292572 hsa-miR-1288-5p 0 0 1
chr14:74292287|74292572 hsa-miR-1288-3p 0 0 1
chr14:74292287|74292572 hsa-miR-125a-3p -7 1 1
chr14:74292287|74292572 hsa-miR-139-3p -12 0 1
chr14:74292287|74292572 hsa-miR-1224-3p -6 0 1
chr14:74292287|74292572 hsa-miR-513a-5p -5 0 1
chr14:74292287|74292572 hsa-miR-125a-5p -2 0 1
chr14:74292287|74292572 hsa-miR-1260 0 0 1
chr14:74292287|74292572 hsa-miR-1280 0 0 1
chr14:74292287|74292572 hsa-miR-125b 0 0 1
chr14:74292287|74292572 hsa-miR-220c 0 0 1
chr14:74292287|74292572 hsa-miR-378 0 0 1
chr14:74292287|74292572 hsa-miR-516b 0 0 1
chr14:74292287|74292572 hsa-miR-610 0 1 0
chr14:74292287|74292572 hsa-miR-612 -17 1 0
chr14:74292287|74292572 hsa-miR-1260a -2 1 0
chr14:74292287|74292572 hsa-miR-3657 -4 1 0
chr14:74292287|74292572 hsa-miR-4486 -17 1 0
chr14:74292287|74292572 hsa-miR-4794 -9 1 0
chr14:74292287|74292572 hsa-miR-6068 -15 1 0
chr14:74292287|74292572 hsa-miR-12120 -11 1 0
chr14:74292287|74292572 hsa-miR-12122 -10 1 0
chr14:74292287|74292572 hsa-miR-4700-3p -10 1 0
chr14:74292287|74292572 hsa-miR-3692-5p -22 1 0
chr14:74292287|74292572 hsa-miR-6867-5p -16 1 0
chr14:74292287|74292572 hsa-miR-4474-3p -18 1 0
chr14:74292287|74292572 hsa-miR-6748-5p -9 1 0
chr14:74292287|74292572 hsa-miR-6765-3p -10 1 0
chr14:74292287|74292572 hsa-miR-6774-3p -8 1 0
chr14:74292287|74292572 hsa-miR-345-3p -8 1 0
chr14:74292287|74292572 hsa-miR-5580-5p -9 1 0
chr14:74292287|74292572 hsa-miR-1228-5p -20 1 0
chr14:74292287|74292572 hsa-miR-2276-5p -6 1 0
chr14:74292287|74292572 hsa-miR-6868-5p -14 1 0
chr14:74292287|74292572 hsa-miR-1296-3p -4 1 0
chr14:74292287|74292572 hsa-miR-6802-3p -7 1 0
chr14:74292287|74292572 hsa-miR-4433a-5p -14 1 0
chr14:74292287|74292572 hsa-miR-4433b-5p -15 1 0
chr14:74292287|74292572 hsa-miR-6769b-5p -16 1 0
chr14:74292287|74292572 hsa-miR-6754-3p -4 1 0
chr14:74292287|74292572 hsa-miR-4649-5p -20 1 0
chr14:74292287|74292572 hsa-miR-4745-5p -13 1 0
chr14:74292287|74292572 hsa-miR-6729-5p -25 1 0
chr14:74292287|74292572 hsa-miR-3187-5p -18 1 0
chr14:74292287|74292572 hsa-miR-4769-5p -10 1 0
chr14:74292287|74292572 hsa-miR-6511a-5p -21 1 0
chr14:74292287|74292572 hsa-miR-6511b-5p -22 1 0
chr14:74292287|74292572 hsa-miR-10398-5p -4 1 0
chr14:74292287|74292572 hsa-miR-9851-5p -18 1 0
chr14:74292287|74292572 hsa-miR-4723-3p -13 1 0
chr14:74292287|74292572 hsa-miR-6834-3p -8 1 0
chr14:74292287|74292572 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:74292287|74292572
ORF Type ORF1
Protein Length 72
Nucleotide Length 219
Protein Sequence MSRSVSRSCPILNKKRKSEAGSGSQVKVNSFSYLTPTSTWYVSVPFFTQPLLPAAHTLLRSQRGGTRPHLCV
Nucleotide Sequence ATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGAACAAGAAAAGAAAATCTGAGGCAGGGTCTGGGAGCCAGGTGAAGGTGAACTCCTTTTCCTATCTCACACCCACGAGTACATGGTATGTCTCTGTTCCTTTTTTCACTCAGCCACTTCTGCCAGCAGCACACACTTTGCTCAGGAGCCAGAGGGGTGGGACACGGCCTCACCTGTGCGTGTAG
CircID chr14:74292287|74292572
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MSLFLFSLSHFCQQHTLCSGARGVGHGLTCACSQPH
Nucleotide Sequence ATGTCTCTGTTCCTTTTTTCACTCAGCCACTTCTGCCAGCAGCACACACTTTGCTCAGGAGCCAGAGGGGTGGGACACGGCCTCACCTGTGCGTGTAGCCAGCCACAT
CircID chr14:74292287|74292572
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MVCLCSFFHSATSASSTHFAQEPEGWDTASPVRVASH
Nucleotide Sequence ATGGTATGTCTCTGTTCCTTTTTTCACTCAGCCACTTCTGCCAGCAGCACACACTTTGCTCAGGAGCCAGAGGGGTGGGACACGGCCTCACCTGTGCGTGTAGCCAGCCAC
CircID chr14:74292287|74292572
ORF Type ORF4
Protein Length 81
Nucleotide Length 243
Protein Sequence MAPEQSVCCWQKWLSEKRNRDIPCTRGCEIGKGVHLHLAPRPCLRFSFLVQNWAASGDASGHVPEVTGLRDPGRERVGLGH
Nucleotide Sequence CTGGCTCCTGAGCAAAGTGTGTGCTGCTGGCAGAAGTGGCTGAGTGAAAAAAGGAACAGAGACATACCATGTACTCGTGGGTGTGAGATAGGAAAAGGAGTTCACCTTCACCTGGCTCCCAGACCCTGCCTCAGATTTTCTTTTCTTGTTCAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGGCTTGGACAC
CircID chr14:74292287|74292572
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MFRIGQLRETLLDMSLKSQDCEILGESEWGLD
Nucleotide Sequence TTGTTCAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGGCTTGGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab