CircRNA Information

General Information
circRNA Basic Information
CircID chr14:74295177|74295336
Strand -
CircType exon
Host Gene ENSG00000119688.19;
Algorism CIRI2;
Sequence CCGAATCTGCATGTGCTTGAACCTGGGCGGACCAAAGGGAAATGTGTGCTGACAACAGGGAGTACTGGCCTCACTCTTGTTGGAGTCCTGGATCACAAAGACCGCCCAAGCGGAGCCCGGCTCTGCCTCAAAACCGTGGCTGCCTCAGTCTGACCCTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:74295177|74295336 hsa-miR-204-5p 0 0 1
chr14:74295177|74295336 hsa-miR-204-3p 0 0 1
chr14:74295177|74295336 hsa-miR-211-5p 0 0 1
chr14:74295177|74295336 hsa-miR-211-3p 0 0 1
chr14:74295177|74295336 hsa-miR-133b 0 1 1
chr14:74295177|74295336 hsa-miR-498-5p 0 0 1
chr14:74295177|74295336 hsa-miR-498-3p 0 0 1
chr14:74295177|74295336 hsa-miR-623 0 0 1
chr14:74295177|74295336 hsa-miR-635 0 0 1
chr14:74295177|74295336 hsa-miR-640 0 1 1
chr14:74295177|74295336 hsa-miR-758-5p 0 0 1
chr14:74295177|74295336 hsa-miR-758-3p 0 0 1
chr14:74295177|74295336 hsa-miR-665 0 0 1
chr14:74295177|74295336 hsa-miR-1304-5p 0 0 1
chr14:74295177|74295336 hsa-miR-1304-3p 0 0 1
chr14:74295177|74295336 hsa-miR-1827 0 0 1
chr14:74295177|74295336 hsa-miR-770-5p 0 1 1
chr14:74295177|74295336 hsa-miR-339-5p 0 0 1
chr14:74295177|74295336 hsa-miR-1274a 0 0 1
chr14:74295177|74295336 hsa-miR-1274b 0 0 1
chr14:74295177|74295336 hsa-miR-9 0 0 1
chr14:74295177|74295336 hsa-miR-133a 0 0 1
chr14:74295177|74295336 hsa-miR-572 1 0 0
chr14:74295177|74295336 hsa-miR-608 1 0 0
chr14:74295177|74295336 hsa-miR-940 1 0 0
chr14:74295177|74295336 hsa-miR-2861 1 0 0
chr14:74295177|74295336 hsa-miR-4316 0 1 0
chr14:74295177|74295336 hsa-miR-4463 1 0 0
chr14:74295177|74295336 hsa-miR-4494 1 1 0
chr14:74295177|74295336 hsa-miR-3960 1 0 0
chr14:74295177|74295336 hsa-miR-4688 1 0 0
chr14:74295177|74295336 hsa-miR-9-5p 0 1 0
chr14:74295177|74295336 hsa-miR-4726-3p 0 1 0
chr14:74295177|74295336 hsa-miR-4433a-3p 0 1 0
chr14:74295177|74295336 hsa-miR-6765-5p 1 1 0
chr14:74295177|74295336 hsa-miR-125b-1-3p 1 0 0
chr14:74295177|74295336 hsa-miR-6854-5p 1 0 0
chr14:74295177|74295336 hsa-miR-7160-5p 1 0 0
chr14:74295177|74295336 hsa-miR-6820-5p 1 0 0
chr14:74295177|74295336 hsa-miR-6727-5p 1 0 0
chr14:74295177|74295336 hsa-miR-1178-5p 1 1 0
chr14:74295177|74295336 hsa-miR-3934-3p 1 0 0
chr14:74295177|74295336 hsa-miR-4691-3p 0 1 0
chr14:74295177|74295336 hsa-miR-7156-3p 1 0 0
chr14:74295177|74295336 hsa-miR-585-5p 1 0 0
chr14:74295177|74295336 hsa-miR-7106-3p 1 0 0
chr14:74295177|74295336 hsa-miR-6801-5p 1 0 0
chr14:74295177|74295336 hsa-miR-6755-3p 0 1 0
chr14:74295177|74295336 hsa-miR-1199-3p 1 0 0
chr14:74295177|74295336 hsa-miR-7159-5p 0 1 0
chr14:74295177|74295336 hsa-miR-3617-3p 0 1 0
chr14:74295177|74295336 hsa-miR-133a-3p 0 1 0
chr14:74295177|74295336 hsa-miR-4763-3p 1 0 0
chr14:74295177|74295336 hsa-miR-6743-5p 1 0 0
chr14:74295177|74295336 hsa-miR-10526-3p 1 0 0
chr14:74295177|74295336 hsa-miR-4632-5p 1 0 0
chr14:74295177|74295336 hsa-miR-4685-5p 1 1 0
chr14:74295177|74295336 hsa-miR-4745-5p 1 0 0
chr14:74295177|74295336 hsa-miR-4723-5p 1 0 0
chr14:74295177|74295336 hsa-miR-6511a-5p 0 1 0
chr14:74295177|74295336 hsa-miR-7843-5p 1 0 0
chr14:74295177|74295336 hsa-miR-10392-3p 1 0 0
chr14:74295177|74295336 hsa-miR-5006-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:74295177|74295336
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MHVLEPGRTKGKCVLTTGSTGLTLVGVLDHKDRPSGARLCLKTVAASV
Nucleotide Sequence CTGCATGTGCTTGAACCTGGGCGGACCAAAGGGAAATGTGTGCTGACAACAGGGAGTACTGGCCTCACTCTTGTTGGAGTCCTGGATCACAAAGACCGCCCAAGCGGAGCCCGGCTCTGCCTCAAAACCGTGGCTGCCTCAGTCTGA

CircID chr14:74295177|74295336
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MASLLLESWITKTAQAEPGSASKPWLPQSDPF
Nucleotide Sequence CTGGCCTCACTCTTGTTGGAGTCCTGGATCACAAAGACCGCCCAAGCGGAGCCCGGCTCTGCCTCAAAACCGTGGCTGCCTCAGTCTGACCCTTTC

CircID chr14:74295177|74295336
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MCADNREYWPHSCWSPGSQRPPKRSPALPQNRGCLSLTL
Nucleotide Sequence ATGTGTGCTGACAACAGGGAGTACTGGCCTCACTCTTGTTGGAGTCCTGGATCACAAAGACCGCCCAAGCGGAGCCCGGCTCTGCCTCAAAACCGTGGCTGCCTCAGTCTGACCCTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites