CircRNA Information

General Information
circRNA Basic Information
CircID chr14:74479959|74480288
Strand -
CircType exon
Host Gene ENSG00000119655.7;
Algorism CIRI2;
Sequence GAGTTTTTATTTATTCAAGAGTAAATTTCCAGGTGTAGAAAGAGGCCACAAGTTAATGTTGTTAAAAAAAAAATTAAACATCTGCTAACCAAGTGCTGCATTTAATGAAACCACCTAAGACAGAAAAAGAGACATGAGACAACCACTGAGAACCAGCCACCCGGAGCTCAGTTTCTGCTACAGAGCACCTCCTCTTCAACGAATCACTGGATACCATTGGAGAGCAAGTCACTGTTGTTGAAGCAGCAGAGCTGGAGGTGCTGTCAAGAGTCTCAGCAGACTCATTGGCCAGATGCACCGAACTCAATGAGGCACTTAGAGATGAGAAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:74479959|74480288 hsa-miR-107 0 0 1
chr14:74479959|74480288 hsa-miR-302a-5p 0 0 1
chr14:74479959|74480288 hsa-miR-302a-3p 0 0 1
chr14:74479959|74480288 hsa-miR-302b-5p 0 0 1
chr14:74479959|74480288 hsa-miR-302b-3p 0 0 1
chr14:74479959|74480288 hsa-miR-302c-5p 0 0 1
chr14:74479959|74480288 hsa-miR-302c-3p 0 0 1
chr14:74479959|74480288 hsa-miR-302d-5p 0 0 1
chr14:74479959|74480288 hsa-miR-302d-3p 0 0 1
chr14:74479959|74480288 hsa-miR-372-5p 0 0 1
chr14:74479959|74480288 hsa-miR-372-3p 0 0 1
chr14:74479959|74480288 hsa-miR-373-5p 0 0 1
chr14:74479959|74480288 hsa-miR-373-3p 0 0 1
chr14:74479959|74480288 hsa-miR-520e-5p 0 0 1
chr14:74479959|74480288 hsa-miR-520e-3p 0 0 1
chr14:74479959|74480288 hsa-miR-519e-5p 0 0 1
chr14:74479959|74480288 hsa-miR-519e-3p 0 0 1
chr14:74479959|74480288 hsa-miR-520b-5p 0 0 1
chr14:74479959|74480288 hsa-miR-520b-3p 0 0 1
chr14:74479959|74480288 hsa-miR-593-5p 0 0 1
chr14:74479959|74480288 hsa-miR-593-3p 0 0 1
chr14:74479959|74480288 hsa-miR-619-5p 0 0 1
chr14:74479959|74480288 hsa-miR-619-3p 0 0 1
chr14:74479959|74480288 hsa-miR-627-5p 0 0 1
chr14:74479959|74480288 hsa-miR-627-3p 0 0 1
chr14:74479959|74480288 hsa-miR-421 0 0 1
chr14:74479959|74480288 hsa-miR-766-5p 0 0 1
chr14:74479959|74480288 hsa-miR-766-3p 0 0 1
chr14:74479959|74480288 hsa-miR-924 0 0 1
chr14:74479959|74480288 hsa-miR-663b 0 0 1
chr14:74479959|74480288 hsa-miR-1250-5p 0 0 1
chr14:74479959|74480288 hsa-miR-1250-3p 0 0 1
chr14:74479959|74480288 hsa-miR-302e 0 0 1
chr14:74479959|74480288 hsa-miR-1825 0 0 1
chr14:74479959|74480288 hsa-miR-140-5p 0 0 1
chr14:74479959|74480288 hsa-miR-199a-5p 0 0 1
chr14:74479959|74480288 hsa-miR-876-3p 0 0 1
chr14:74479959|74480288 hsa-miR-875-3p 0 0 1
chr14:74479959|74480288 hsa-miR-199b-5p 0 0 1
chr14:74479959|74480288 hsa-miR-515-3p 0 1 1
chr14:74479959|74480288 hsa-miR-520d-3p 0 0 1
chr14:74479959|74480288 hsa-miR-519b-3p 0 0 1
chr14:74479959|74480288 hsa-miR-519c-3p 0 0 1
chr14:74479959|74480288 hsa-miR-520a-3p 0 0 1
chr14:74479959|74480288 hsa-miR-520c-3p 0 0 1
chr14:74479959|74480288 hsa-miR-515-5p 0 0 1
chr14:74479959|74480288 hsa-miR-590-3p 0 0 1
chr14:74479959|74480288 hsa-miR-548d-3p 0 0 1
chr14:74479959|74480288 hsa-miR-103 0 0 1
chr14:74479959|74480288 hsa-miR-453 0 0 1
chr14:74479959|74480288 hsa-miR-519a 0 0 1
chr14:74479959|74480288 hsa-miR-622 0 1 0
chr14:74479959|74480288 hsa-miR-1293 1 0 0
chr14:74479959|74480288 hsa-miR-4267 0 1 0
chr14:74479959|74480288 hsa-miR-4263 0 1 0
chr14:74479959|74480288 hsa-miR-3672 0 1 0
chr14:74479959|74480288 hsa-miR-4497 1 0 0
chr14:74479959|74480288 hsa-miR-4663 1 0 0
chr14:74479959|74480288 hsa-miR-4682 1 1 0
chr14:74479959|74480288 hsa-miR-5787 1 0 0
chr14:74479959|74480288 hsa-miR-8062 0 1 0
chr14:74479959|74480288 hsa-miR-93-3p 0 1 0
chr14:74479959|74480288 hsa-miR-3194-3p 1 1 0
chr14:74479959|74480288 hsa-miR-6861-5p 1 0 0
chr14:74479959|74480288 hsa-miR-3192-5p 1 0 0
chr14:74479959|74480288 hsa-miR-4709-3p 1 1 0
chr14:74479959|74480288 hsa-miR-7160-5p 1 0 0
chr14:74479959|74480288 hsa-miR-6842-3p 0 1 0
chr14:74479959|74480288 hsa-miR-6776-5p 1 0 0
chr14:74479959|74480288 hsa-miR-4738-3p 0 1 0
chr14:74479959|74480288 hsa-miR-6878-3p 0 1 0
chr14:74479959|74480288 hsa-miR-4743-3p 0 1 0
chr14:74479959|74480288 hsa-miR-597-3p 0 1 0
chr14:74479959|74480288 hsa-miR-383-3p 0 1 0
chr14:74479959|74480288 hsa-miR-4750-5p 1 0 0
chr14:74479959|74480288 hsa-miR-3675-3p 0 1 0
chr14:74479959|74480288 hsa-miR-676-5p 0 1 0
chr14:74479959|74480288 hsa-miR-329-5p 1 0 0
chr14:74479959|74480288 hsa-miR-4709-5p 1 1 0
chr14:74479959|74480288 hsa-miR-500a-3p 0 1 0
chr14:74479959|74480288 hsa-miR-6756-5p 1 0 0
chr14:74479959|74480288 hsa-miR-6842-5p 0 1 0
chr14:74479959|74480288 hsa-miR-6851-5p 0 1 0
chr14:74479959|74480288 hsa-miR-4632-5p 1 0 0
chr14:74479959|74480288 hsa-miR-6744-3p 0 1 0
chr14:74479959|74480288 hsa-miR-33b-3p 0 1 0
chr14:74479959|74480288 hsa-miR-6781-3p 0 1 0
chr14:74479959|74480288 hsa-miR-7156-5p 0 1 0
chr14:74479959|74480288 hsa-miR-494-5p 1 1 0
chr14:74479959|74480288 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:74479959|74480288
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MLQSTSSSTNHWIPLESKSLLLKQQSWRCCQESQQTHWPDAPNSMRHLEMRN
Nucleotide Sequence CTGCTACAGAGCACCTCCTCTTCAACGAATCACTGGATACCATTGGAGAGCAAGTCACTGTTGTTGAAGCAGCAGAGCTGGAGGTGCTGTCAAGAGTCTCAGCAGACTCATTGGCCAGATGCACCGAACTCAATGAGGCACTTAGAGATGAGAAAC
CircID chr14:74479959|74480288
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MRQPLRTSHPELSFCYRAPPLQRITGYHWRASHCC
Nucleotide Sequence ATGAGACAACCACTGAGAACCAGCCACCCGGAGCTCAGTTTCTGCTACAGAGCACCTCCTCTTCAACGAATCACTGGATACCATTGGAGAGCAAGTCACTGTTGTTGA
CircID chr14:74479959|74480288
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MDTIGEQVTVVEAAELEVLSRVSADSLARCTELNEALRDEK
Nucleotide Sequence CTGGATACCATTGGAGAGCAAGTCACTGTTGTTGAAGCAGCAGAGCTGGAGGTGCTGTCAAGAGTCTCAGCAGACTCATTGGCCAGATGCACCGAACTCAATGAGGCACTTAGAGATGAGAAA
CircID chr14:74479959|74480288
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MQHLVSRCLIFFLTTLTCGLFLHLEIYS
Nucleotide Sequence ATGCAGCACTTGGTTAGCAGATGTTTAATTTTTTTTTTAACAACATTAACTTGTGGCCTCTTTCTACACCTGGAAATTTACTCTTGA
CircID chr14:74479959|74480288
ORF Type ORF5
Protein Length 77
Nucleotide Length 234
Protein Sequence MSSVHLANESAETLDSTSSSAASTTVTCSPMVSSDSLKRRCSVAETELRVAGSQWLSHVSFSVLGGFIKCSTWLADV
Nucleotide Sequence TTGAGTTCGGTGCATCTGGCCAATGAGTCTGCTGAGACTCTTGACAGCACCTCCAGCTCTGCTGCTTCAACAACAGTGACTTGCTCTCCAATGGTATCCAGTGATTCGTTGAAGAGGAGGTGCTCTGTAGCAGAAACTGAGCTCCGGGTGGCTGGTTCTCAGTGGTTGTCTCATGTCTCTTTTTCTGTCTTAGGTGGTTTCATTAAATGCAGCACTTGGTTAGCAGATGTTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab