CircRNA Information

General Information
circRNA Basic Information
CircID chr14:74503260|74503381
Strand +
CircType exon
Host Gene ENSG00000119681.10;
Algorism CIRI2;
Sequence CTCCCTGACCACGACATCCACATGGACATCTGCTGGAAAAAAGTCACCAATGATGTGTGCAGCGAACCCCTGCGTGGGCACCGCACCACCTACACGGAATGCTGCTGCCAGGACGGCGAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:74503260|74503381 hsa-miR-15a-5p 0 0 1
chr14:74503260|74503381 hsa-miR-15a-3p 0 0 1
chr14:74503260|74503381 hsa-miR-107 0 0 1
chr14:74503260|74503381 hsa-miR-15b-5p 0 0 1
chr14:74503260|74503381 hsa-miR-15b-3p 0 0 1
chr14:74503260|74503381 hsa-miR-195-5p 0 0 1
chr14:74503260|74503381 hsa-miR-195-3p 0 0 1
chr14:74503260|74503381 hsa-miR-424-5p 0 0 1
chr14:74503260|74503381 hsa-miR-424-3p 0 0 1
chr14:74503260|74503381 hsa-miR-497-5p 0 0 1
chr14:74503260|74503381 hsa-miR-497-3p 0 0 1
chr14:74503260|74503381 hsa-miR-639 0 0 1
chr14:74503260|74503381 hsa-miR-675-5p 0 0 1
chr14:74503260|74503381 hsa-miR-675-3p 0 0 1
chr14:74503260|74503381 hsa-miR-922 0 0 1
chr14:74503260|74503381 hsa-miR-1179 0 0 1
chr14:74503260|74503381 hsa-miR-885-3p 1 0 1
chr14:74503260|74503381 hsa-miR-338-3p 0 0 1
chr14:74503260|74503381 hsa-miR-103 0 0 1
chr14:74503260|74503381 hsa-miR-16 0 0 1
chr14:74503260|74503381 hsa-miR-608 1 0 0
chr14:74503260|74503381 hsa-miR-4466 1 0 0
chr14:74503260|74503381 hsa-miR-4657 1 0 0
chr14:74503260|74503381 hsa-miR-8073 1 0 0
chr14:74503260|74503381 hsa-miR-6742-5p 1 0 0
chr14:74503260|74503381 hsa-miR-6821-5p 1 0 0
chr14:74503260|74503381 hsa-miR-4746-3p 1 0 0
chr14:74503260|74503381 hsa-miR-4763-3p 1 0 0
chr14:74503260|74503381 hsa-miR-6722-3p 1 0 0
chr14:74503260|74503381 hsa-miR-1909-3p 1 0 0
chr14:74503260|74503381 hsa-miR-365a-5p 1 0 0
chr14:74503260|74503381 hsa-miR-10401-3p 1 0 0
chr14:74503260|74503381 hsa-miR-9851-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:74503260|74503381
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MDICWKKVTNDVCSEPLRGHRTTYTECCCQDGE
Nucleotide Sequence ATGGACATCTGCTGGAAAAAAGTCACCAATGATGTGTGCAGCGAACCCCTGCGTGGGCACCGCACCACCTACACGGAATGCTGCTGCCAGGACGGCGAG
CircID chr14:74503260|74503381
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MTTTSTWTSAGKKSPMMCAANPCVGTAPPTRNAAARTAR
Nucleotide Sequence CTGACCACGACATCCACATGGACATCTGCTGGAAAAAAGTCACCAATGATGTGTGCAGCGAACCCCTGCGTGGGCACCGCACCACCTACACGGAATGCTGCTGCCAGGACGGCGAGG
CircID chr14:74503260|74503381
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MAAAFRVGGAVPTQGFAAHIIGDFFPADVHVDVVVRE
Nucleotide Sequence CTGGCAGCAGCATTCCGTGTAGGTGGTGCGGTGCCCACGCAGGGGTTCGCTGCACACATCATTGGTGACTTTTTTCCAGCAGATGTCCATGTGGATGTCGTGGTCAGGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab