CircRNA Information

General Information
circRNA Basic Information
CircID chr14:74816931|74817107
Strand +
CircType Non-Repeat
Host Gene ENSG00000119596.17;
Algorism find_circ;CIRI2;DCC;
Sequence GTAATGGAATATGAATATGAAGCTGAGATGGAGGAGACTTACCGCACCAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGATGGCTTTTTTCCCTTCATCATCCTGGATGCCATCAATGACAGAGTTAGGCATTTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:74816931|74817107 hsa-miR-138-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:74816931|74817107
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAINDRVRHFDQFWSAAKTKGFE
Nucleotide Sequence ATGGAATATGAATATGAAGCTGAGATGGAGGAGACTTACCGCACCAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGATGGCTTTTTTCCCTTCATCATCCTGGATGCCATCAATGACAGAGTTAGGCATTTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTGAG

CircID chr14:74816931|74817107
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MNMKLRWRRLTAPACSKLSKRLWMMAFFPSSSWMPSMTELGILTSFGVQQKPRDL
Nucleotide Sequence ATGAATATGAAGCTGAGATGGAGGAGACTTACCGCACCAGCATGTTCAAAACTTTCAAAAAGACTCTGGATGATGGCTTTTTTCCCTTCATCATCCTGGATGCCATCAATGACAGAGTTAGGCATTTTGACCAGTTTTGGAGTGCAGCAAAAACCAAGGGATTTG

CircID chr14:74816931|74817107
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MPNSVIDGIQDDEGKKAIIQSLFESFEHAGAVSLLHLSFIFIFHY
Nucleotide Sequence ATGCCTAACTCTGTCATTGATGGCATCCAGGATGATGAAGGGAAAAAAGCCATCATCCAGAGTCTTTTTGAAAGTTTTGAACATGCTGGTGCGGTAAGTCTCCTCCATCTCAGCTTCATATTCATATTCCATTAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:74816931|74817107 U2AF2 10 15 0
chr14:74816931|74817107 MOV10 1 0 0
chr14:74816931|74817107 ELAVL1 8 1 1
chr14:74816931|74817107 SF3B4 1 0 0
chr14:74816931|74817107 FAM120A 3 1 1
chr14:74816931|74817107 CELF2 0 1 0
chr14:74816931|74817107 PRPF8 4 2 1
chr14:74816931|74817107 DDX42 1 0 0
chr14:74816931|74817107 UPF1 3 0 0
chr14:74816931|74817107 SRSF10 1 0 0
chr14:74816931|74817107 TAF15 1 0 0
chr14:74816931|74817107 FMR1 12 3 3
chr14:74816931|74817107 CPSF6 4 0 0
chr14:74816931|74817107 DGCR8 0 0 1
chr14:74816931|74817107 SRSF1 3 3 1
chr14:74816931|74817107 NOP58 5 2 2
chr14:74816931|74817107 SRSF3 1 0 0
chr14:74816931|74817107 U2AF1 1 0 0
chr14:74816931|74817107 TNRC6A 1 0 0
chr14:74816931|74817107 NOP56 2 3 1
chr14:74816931|74817107 SRSF9 2 1 0
chr14:74816931|74817107 DDX54 8 4 5
chr14:74816931|74817107 LSM11 1 1 0
chr14:74816931|74817107 RBM10 13 8 0
chr14:74816931|74817107 HNRNPM 1 0 0
chr14:74816931|74817107 SF3A3 1 0 0
chr14:74816931|74817107 FIP1L1 1 0 0
chr14:74816931|74817107 PTBP1 2 3 0
chr14:74816931|74817107 TRA2A 3 1 3
chr14:74816931|74817107 KHSRP 0 1 0
chr14:74816931|74817107 ZNF184 2 0 0
chr14:74816931|74817107 SMNDC1 3 1 0
chr14:74816931|74817107 ACIN1 1 3 2
chr14:74816931|74817107 LIN28B 5 0 0
chr14:74816931|74817107 LIN28A 1 1 0
chr14:74816931|74817107 FXR1 3 0 0
chr14:74816931|74817107 FXR2 4 0 0
chr14:74816931|74817107 SND1 1 0 0
chr14:74816931|74817107 IGF2BP3 2 0 0
chr14:74816931|74817107 IGF2BP2 9 7 4
chr14:74816931|74817107 TARDBP 3 0 0
chr14:74816931|74817107 YTHDC1 0 0 1
chr14:74816931|74817107 AIFM1 1 0 0
chr14:74816931|74817107 BUD13 3 0 1
chr14:74816931|74817107 RBFOX2 2 0 0
chr14:74816931|74817107 CNBP 2 0 0
chr14:74816931|74817107 SLTM 0 0 2
chr14:74816931|74817107 RBM47 2 0 0
chr14:74816931|74817107 CSTF2T 2 1 1
chr14:74816931|74817107 CSTF2 1 0 0
chr14:74816931|74817107 RBM27 1 0 0
chr14:74816931|74817107 METTL3 1 0 0
chr14:74816931|74817107 XRN2 0 0 1
chr14:74816931|74817107 DKC1 1 0 0
chr14:74816931|74817107 AGO2 1 0 0
chr14:74816931|74817107 AGO1 1 0 0
chr14:74816931|74817107 EIF4A3 5 3 3
chr14:74816931|74817107 FBL 2 2 1