CircRNA Information

General Information
circRNA Basic Information
CircID chr14:75109685|75110371
Strand -
CircType exon
Host Gene ENSG00000119638.12;
Algorism find_circ;CIRI2;DCC;
Sequence AGAGATGGAGGAAAAAGTCACTCTGCTTAATGCACCTACAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCACCCATTGCTGTAGTAACATCACGAACCAGTGAAGTCTATGTTTGGGGTGGTGGAAAATCCACCCCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:75109685|75110371 hsa-miR-27a-5p 0 0 1
chr14:75109685|75110371 hsa-miR-27a-3p 0 0 1
chr14:75109685|75110371 hsa-miR-224-5p 0 0 1
chr14:75109685|75110371 hsa-miR-224-3p 0 0 1
chr14:75109685|75110371 hsa-miR-27b-5p 0 0 1
chr14:75109685|75110371 hsa-miR-27b-3p 0 0 1
chr14:75109685|75110371 hsa-miR-134-5p 0 0 1
chr14:75109685|75110371 hsa-miR-134-3p 0 0 1
chr14:75109685|75110371 hsa-miR-155-5p 0 0 1
chr14:75109685|75110371 hsa-miR-155-3p 0 0 1
chr14:75109685|75110371 hsa-miR-335-5p 0 0 1
chr14:75109685|75110371 hsa-miR-335-3p 0 0 1
chr14:75109685|75110371 hsa-miR-519e-5p 0 0 1
chr14:75109685|75110371 hsa-miR-519e-3p 0 0 1
chr14:75109685|75110371 hsa-miR-608 0 1 1
chr14:75109685|75110371 hsa-miR-660-5p 0 0 1
chr14:75109685|75110371 hsa-miR-660-3p 0 0 1
chr14:75109685|75110371 hsa-miR-668-5p 0 0 1
chr14:75109685|75110371 hsa-miR-668-3p 0 0 1
chr14:75109685|75110371 hsa-miR-802 0 0 1
chr14:75109685|75110371 hsa-miR-765 0 0 1
chr14:75109685|75110371 hsa-miR-1293 0 1 1
chr14:75109685|75110371 hsa-miR-1243 0 1 1
chr14:75109685|75110371 hsa-miR-1262 0 0 1
chr14:75109685|75110371 hsa-miR-1252-5p 0 0 1
chr14:75109685|75110371 hsa-miR-1252-3p 0 0 1
chr14:75109685|75110371 hsa-miR-1283 0 0 1
chr14:75109685|75110371 hsa-miR-361-3p 0 0 1
chr14:75109685|75110371 hsa-miR-524-5p 0 0 1
chr14:75109685|75110371 hsa-miR-342-5p 0 0 1
chr14:75109685|75110371 hsa-miR-515-3p 0 0 1
chr14:75109685|75110371 hsa-miR-502-3p 0 1 1
chr14:75109685|75110371 hsa-miR-501-3p 0 1 1
chr14:75109685|75110371 hsa-miR-142-3p 0 0 1
chr14:75109685|75110371 hsa-miR-520d-5p 0 0 1
chr14:75109685|75110371 hsa-miR-128 0 0 1
chr14:75109685|75110371 hsa-miR-371-3p 0 0 1
chr14:75109685|75110371 hsa-miR-499-3p 0 0 1
chr14:75109685|75110371 hsa-miR-1265 0 1 0
chr14:75109685|75110371 hsa-miR-4281 1 0 0
chr14:75109685|75110371 hsa-miR-4475 0 1 0
chr14:75109685|75110371 hsa-miR-4516 0 1 0
chr14:75109685|75110371 hsa-miR-4531 0 1 0
chr14:75109685|75110371 hsa-miR-4534 1 1 0
chr14:75109685|75110371 hsa-miR-4651 0 1 0
chr14:75109685|75110371 hsa-miR-4739 1 0 0
chr14:75109685|75110371 hsa-miR-5572 0 1 0
chr14:75109685|75110371 hsa-miR-6860 1 0 0
chr14:75109685|75110371 hsa-miR-8060 1 0 0
chr14:75109685|75110371 hsa-miR-8073 1 0 0
chr14:75109685|75110371 hsa-miR-8082 1 1 0
chr14:75109685|75110371 hsa-miR-9985 0 1 0
chr14:75109685|75110371 hsa-miR-12114 1 0 0
chr14:75109685|75110371 hsa-miR-12115 0 1 0
chr14:75109685|75110371 hsa-miR-12120 0 1 0
chr14:75109685|75110371 hsa-miR-12122 1 1 0
chr14:75109685|75110371 hsa-miR-7106-5p 1 0 0
chr14:75109685|75110371 hsa-miR-766-5p 0 1 0
chr14:75109685|75110371 hsa-miR-4786-5p 1 0 0
chr14:75109685|75110371 hsa-miR-3192-5p 1 0 0
chr14:75109685|75110371 hsa-miR-6880-5p 1 1 0
chr14:75109685|75110371 hsa-miR-3677-5p 1 0 0
chr14:75109685|75110371 hsa-miR-7160-5p 1 0 0
chr14:75109685|75110371 hsa-miR-6770-5p 0 1 0
chr14:75109685|75110371 hsa-miR-6740-5p 0 1 0
chr14:75109685|75110371 hsa-miR-4738-3p 1 0 0
chr14:75109685|75110371 hsa-miR-20b-3p 0 1 0
chr14:75109685|75110371 hsa-miR-371b-3p 0 1 0
chr14:75109685|75110371 hsa-miR-500a-3p 0 1 0
chr14:75109685|75110371 hsa-miR-4763-3p 1 0 0
chr14:75109685|75110371 hsa-miR-6812-5p 0 1 0
chr14:75109685|75110371 hsa-miR-6737-5p 0 1 0
chr14:75109685|75110371 hsa-miR-6819-5p 0 1 0
chr14:75109685|75110371 hsa-miR-11181-3p 1 1 0
chr14:75109685|75110371 hsa-miR-1249-5p 1 0 0
chr14:75109685|75110371 hsa-miR-5196-5p 1 0 0
chr14:75109685|75110371 hsa-miR-6780b-5p 1 0 0
chr14:75109685|75110371 hsa-miR-4745-3p 1 0 0
chr14:75109685|75110371 hsa-miR-6858-5p 1 0 0
chr14:75109685|75110371 hsa-miR-6849-5p 1 0 0
chr14:75109685|75110371 hsa-miR-7107-3p 0 1 0
chr14:75109685|75110371 hsa-miR-33b-3p 1 0 0
chr14:75109685|75110371 hsa-miR-9902 0 1 0
chr14:75109685|75110371 hsa-miR-499a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:75109685|75110371
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MPGTTATLDNIQFLGGGFSTTPNIDFTGS
Nucleotide Sequence CTGCCGGGCACTACAGCCACTCTTGATAACATCCAGTTTCTGGGGGGTGGATTTTCCACCACCCCAAACATAGACTTCACTGGTTCGTGA
CircID chr14:75109685|75110371
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MVRDVTTAMGASVTVLDLGLFVGALSRVTFSSIS
Nucleotide Sequence CTGGTTCGTGATGTTACTACAGCAATGGGTGCTTCAGTCACAGTGCTTGACCTTGGTCTCTTTGTAGGTGCATTAAGCAGAGTGACTTTTTCCTCCATCTCT
CircID chr14:75109685|75110371
ORF Type ORF3
Protein Length 80
Nucleotide Length 240
Protein Sequence MEEKVTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWV
Nucleotide Sequence ATGGAGGAAAAAGTCACTCTGCTTAATGCACCTACAAAGAGACCAAGGTCAAGCACTGTGACTGAAGCACCCATTGCTGTAGTAACATCACGAACCAGTGAAGTCTATGTTTGGGGTGGTGGAAAATCCACCCCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGGTG
CircID chr14:75109685|75110371
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MFGVVENPPPRNWMLSRVAVVPGRSVQGIPTLLWSQWRRNCTLG
Nucleotide Sequence ATGTTTGGGGTGGTGGAAAATCCACCCCCCAGAAACTGGATGTTATCAAGAGTGGCTGTAGTGCCCGGCAGGTCTGTGCAGGGAATACCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTGTACACTTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:75109685|75110371 KHSRP 2 1 0
chr14:75109685|75110371 ELAVL1 0 1 2
chr14:75109685|75110371 CELF2 0 1 0
chr14:75109685|75110371 PRPF8 1 1 1
chr14:75109685|75110371 TAF15 0 1 0
chr14:75109685|75110371 FMR1 0 2 4
chr14:75109685|75110371 CPSF6 1 0 0
chr14:75109685|75110371 DGCR8 0 0 1
chr14:75109685|75110371 SRSF7 1 1 1
chr14:75109685|75110371 SRSF1 1 3 2
chr14:75109685|75110371 NOP58 3 1 1
chr14:75109685|75110371 U2AF1 0 0 3
chr14:75109685|75110371 ADAR 0 0 1
chr14:75109685|75110371 U2AF2 3 2 2
chr14:75109685|75110371 SRSF9 1 0 1
chr14:75109685|75110371 NOP56 0 1 0
chr14:75109685|75110371 PCBP2 0 1 0
chr14:75109685|75110371 HNRNPM 0 0 1
chr14:75109685|75110371 PTBP1 0 1 0
chr14:75109685|75110371 TRA2A 1 0 1
chr14:75109685|75110371 HNRNPA1 0 1 0
chr14:75109685|75110371 RANGAP1 0 0 1
chr14:75109685|75110371 LIN28B 0 1 0
chr14:75109685|75110371 FXR1 0 1 1
chr14:75109685|75110371 FXR2 0 1 1
chr14:75109685|75110371 SND1 1 0 1
chr14:75109685|75110371 BUD13 1 0 2
chr14:75109685|75110371 IGF2BP3 0 1 0
chr14:75109685|75110371 IGF2BP2 1 1 3
chr14:75109685|75110371 TARDBP 0 1 0
chr14:75109685|75110371 FBL 0 1 0
chr14:75109685|75110371 GTF2F1 0 0 1
chr14:75109685|75110371 RBFOX2 1 3 0
chr14:75109685|75110371 CSTF2T 0 1 0
chr14:75109685|75110371 BCCIP 0 1 0
chr14:75109685|75110371 XRN2 1 0 1
chr14:75109685|75110371 AIFM1 1 0 1
chr14:75109685|75110371 EIF4A3 4 3 3
chr14:75109685|75110371 AGO2 0 0 4
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab