CircRNA Information

General Information
circRNA Basic Information
CircID chr14:75280977|75281141
Strand -
CircType exon
Host Gene ENSG00000170345.8;
Algorism CIRI2;
Sequence CCCGGAGTCTGAGGAGGCCTTCACCCTGCCTCTCCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAGAGCATCAGCAGCATGGAGCTGAAGACCGAGCCCTTTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:75280977|75281141 hsa-miR-616-5p 0 0 1
chr14:75280977|75281141 hsa-miR-616-3p 0 0 1
chr14:75280977|75281141 hsa-miR-626 3 0 1
chr14:75280977|75281141 hsa-miR-635 -3 0 1
chr14:75280977|75281141 hsa-miR-940 -11 0 1
chr14:75280977|75281141 hsa-miR-1255a -4 0 1
chr14:75280977|75281141 hsa-miR-1266-5p 0 0 1
chr14:75280977|75281141 hsa-miR-1266-3p 0 0 1
chr14:75280977|75281141 hsa-miR-1292-5p 0 0 1
chr14:75280977|75281141 hsa-miR-1292-3p 0 0 1
chr14:75280977|75281141 hsa-miR-1322 -7 1 1
chr14:75280977|75281141 hsa-miR-1827 -1 0 1
chr14:75280977|75281141 hsa-miR-423-3p -13 1 1
chr14:75280977|75281141 hsa-miR-1224-5p -9 0 1
chr14:75280977|75281141 hsa-miR-1207-5p -13 0 1
chr14:75280977|75281141 hsa-miR-1255b 0 0 1
chr14:75280977|75281141 hsa-miR-1254 0 0 1
chr14:75280977|75281141 hsa-miR-24 0 0 1
chr14:75280977|75281141 hsa-miR-637 -22 1 0
chr14:75280977|75281141 hsa-miR-762 1 0 0
chr14:75280977|75281141 hsa-miR-765 -11 1 0
chr14:75280977|75281141 hsa-miR-760 1 0 0
chr14:75280977|75281141 hsa-miR-1268a 1 0 0
chr14:75280977|75281141 hsa-miR-3196 1 0 0
chr14:75280977|75281141 hsa-miR-4252 -8 1 0
chr14:75280977|75281141 hsa-miR-4270 -20 1 0
chr14:75280977|75281141 hsa-miR-3907 1 0 0
chr14:75280977|75281141 hsa-miR-1268b 1 0 0
chr14:75280977|75281141 hsa-miR-378g -12 1 0
chr14:75280977|75281141 hsa-miR-4437 -17 1 0
chr14:75280977|75281141 hsa-miR-4493 -16 1 0
chr14:75280977|75281141 hsa-miR-4538 1 0 0
chr14:75280977|75281141 hsa-miR-4656 1 0 0
chr14:75280977|75281141 hsa-miR-4674 -13 1 0
chr14:75280977|75281141 hsa-miR-4689 -21 1 0
chr14:75280977|75281141 hsa-miR-4721 -13 1 0
chr14:75280977|75281141 hsa-miR-4734 1 0 0
chr14:75280977|75281141 hsa-miR-4736 1 0 0
chr14:75280977|75281141 hsa-miR-4741 -18 1 0
chr14:75280977|75281141 hsa-miR-4784 -10 1 0
chr14:75280977|75281141 hsa-miR-5787 1 0 0
chr14:75280977|75281141 hsa-miR-6126 -9 1 0
chr14:75280977|75281141 hsa-miR-8075 -13 1 0
chr14:75280977|75281141 hsa-miR-8089 -20 1 0
chr14:75280977|75281141 hsa-miR-12127 1 0 0
chr14:75280977|75281141 hsa-miR-6734-5p 1 0 0
chr14:75280977|75281141 hsa-miR-7155-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6765-5p 1 0 0
chr14:75280977|75281141 hsa-miR-224-5p 0 1 0
chr14:75280977|75281141 hsa-miR-1178-5p -6 1 0
chr14:75280977|75281141 hsa-miR-6793-5p 1 0 0
chr14:75280977|75281141 hsa-miR-23a-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6810-5p -17 1 0
chr14:75280977|75281141 hsa-miR-5088-5p -22 1 0
chr14:75280977|75281141 hsa-miR-1226-5p -16 1 0
chr14:75280977|75281141 hsa-miR-296-3p 1 0 0
chr14:75280977|75281141 hsa-miR-6749-5p 1 0 0
chr14:75280977|75281141 hsa-miR-5581-3p -3 1 0
chr14:75280977|75281141 hsa-miR-6893-5p -14 1 0
chr14:75280977|75281141 hsa-miR-6743-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6813-5p -14 1 0
chr14:75280977|75281141 hsa-miR-7107-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6774-5p -10 1 0
chr14:75280977|75281141 hsa-miR-6808-5p -10 1 0
chr14:75280977|75281141 hsa-miR-3620-5p 1 0 0
chr14:75280977|75281141 hsa-miR-5196-5p 1 0 0
chr14:75280977|75281141 hsa-miR-10396b-5p 1 0 0
chr14:75280977|75281141 hsa-miR-4649-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6846-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6848-5p 1 0 0
chr14:75280977|75281141 hsa-miR-6858-5p -17 1 0
chr14:75280977|75281141 hsa-miR-3116 -9 1 0
chr14:75280977|75281141 hsa-miR-6791-3p 0 1 0
chr14:75280977|75281141 hsa-miR-4646-5p -15 1 0
chr14:75280977|75281141 hsa-miR-6791-5p 1 0 0
chr14:75280977|75281141 hsa-miR-10400-3p -19 1 0
chr14:75280977|75281141 hsa-miR-3928-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:75280977|75281141
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MPLLNDPEPKPSVEPVKSISSMELKTEPFDDFLFPASSRPSGSETA
Nucleotide Sequence CTGCCTCTCCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAGAGCATCAGCAGCATGGAGCTGAAGACCGAGCCCTTTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCC
CircID chr14:75280977|75281141
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MRRPSPCLSSMTLSPSPQWNLSRASAAWS
Nucleotide Sequence CTGAGGAGGCCTTCACCCTGCCTCTCCTCAATGACCCTGAGCCCAAGCCCTCAGTGGAACCTGTCAAGAGCATCAGCAGCATGGAGCTGA
CircID chr14:75280977|75281141
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MGLDDAGNRKSSKGSVFSSMLLMLLTGSTEGLGSGSLRRGRVKASSDSG
Nucleotide Sequence CTGGGCCTGGATGATGCTGGGAACAGGAAGTCATCAAAGGGCTCGGTCTTCAGCTCCATGCTGCTGATGCTCTTGACAGGTTCCACTGAGGGCTTGGGCTCAGGGTCATTGAGGAGAGGCAGGGTGAAGGCCTCCTCAGACTCCGGG
CircID chr14:75280977|75281141
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MSQSHWAWMMLGTGSHQRARSSAPCC
Nucleotide Sequence CTGTCTCAGAGCCACTGGGCCTGGATGATGCTGGGAACAGGAAGTCATCAAAGGGCTCGGTCTTCAGCTCCATGCTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab