CircRNA Information

General Information
circRNA Basic Information
CircID chr14:75281045|75281312
Strand -
CircType exon
Host Gene ENSG00000170345.8;
Algorism CIRI2;
Sequence CTGTCAAGAGCATCAGCAGCATGGAGCTGAAGACCGAGCCCTTTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCCCGCTCCGTGCCAGACATGGACCTATCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGGAGCCCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCTGCACTGCTTACACGTCTTCCTTCGTCTTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:75281045|75281312 hsa-miR-148a-5p 0 0 1
chr14:75281045|75281312 hsa-miR-148a-3p 0 0 1
chr14:75281045|75281312 hsa-miR-152-5p 0 0 1
chr14:75281045|75281312 hsa-miR-152-3p 0 0 1
chr14:75281045|75281312 hsa-miR-148b-5p 0 0 1
chr14:75281045|75281312 hsa-miR-148b-3p 0 0 1
chr14:75281045|75281312 hsa-miR-552-5p 0 0 1
chr14:75281045|75281312 hsa-miR-552-3p 0 0 1
chr14:75281045|75281312 hsa-miR-564 0 0 1
chr14:75281045|75281312 hsa-miR-622 0 1 1
chr14:75281045|75281312 hsa-miR-626 0 0 1
chr14:75281045|75281312 hsa-miR-1301-5p 0 0 1
chr14:75281045|75281312 hsa-miR-1301-3p 0 0 1
chr14:75281045|75281312 hsa-miR-766-5p 0 0 1
chr14:75281045|75281312 hsa-miR-766-3p 0 0 1
chr14:75281045|75281312 hsa-miR-1231 1 1 1
chr14:75281045|75281312 hsa-miR-663b 1 0 1
chr14:75281045|75281312 hsa-miR-1255a 0 0 1
chr14:75281045|75281312 hsa-miR-1292-5p 0 0 1
chr14:75281045|75281312 hsa-miR-1292-3p 0 0 1
chr14:75281045|75281312 hsa-miR-1252-5p 0 0 1
chr14:75281045|75281312 hsa-miR-1252-3p 0 0 1
chr14:75281045|75281312 hsa-miR-1322 0 1 1
chr14:75281045|75281312 hsa-miR-125a-3p 0 0 1
chr14:75281045|75281312 hsa-miR-296-5p 0 0 1
chr14:75281045|75281312 hsa-miR-423-3p 0 1 1
chr14:75281045|75281312 hsa-miR-1207-3p 0 0 1
chr14:75281045|75281312 hsa-miR-654-3p 0 0 1
chr14:75281045|75281312 hsa-miR-1255b 0 0 1
chr14:75281045|75281312 hsa-miR-220c 0 0 1
chr14:75281045|75281312 hsa-miR-7 0 0 1
chr14:75281045|75281312 hsa-miR-153 0 0 1
chr14:75281045|75281312 hsa-miR-1254 0 0 1
chr14:75281045|75281312 hsa-miR-557 1 0 0
chr14:75281045|75281312 hsa-miR-637 1 0 0
chr14:75281045|75281312 hsa-miR-762 1 0 0
chr14:75281045|75281312 hsa-miR-760 0 1 0
chr14:75281045|75281312 hsa-miR-1204 0 1 0
chr14:75281045|75281312 hsa-miR-1268a 1 0 0
chr14:75281045|75281312 hsa-miR-711 0 1 0
chr14:75281045|75281312 hsa-miR-4298 1 0 0
chr14:75281045|75281312 hsa-miR-4252 0 1 0
chr14:75281045|75281312 hsa-miR-4267 0 1 0
chr14:75281045|75281312 hsa-miR-4270 1 1 0
chr14:75281045|75281312 hsa-miR-4289 0 1 0
chr14:75281045|75281312 hsa-miR-3916 1 0 0
chr14:75281045|75281312 hsa-miR-1268b 1 0 0
chr14:75281045|75281312 hsa-miR-4518 0 1 0
chr14:75281045|75281312 hsa-miR-4519 0 1 0
chr14:75281045|75281312 hsa-miR-4538 1 0 0
chr14:75281045|75281312 hsa-miR-4656 1 0 0
chr14:75281045|75281312 hsa-miR-4706 1 0 0
chr14:75281045|75281312 hsa-miR-4739 1 0 0
chr14:75281045|75281312 hsa-miR-4741 1 1 0
chr14:75281045|75281312 hsa-miR-4767 1 0 0
chr14:75281045|75281312 hsa-miR-5047 0 1 0
chr14:75281045|75281312 hsa-miR-5091 1 0 0
chr14:75281045|75281312 hsa-miR-5787 1 0 0
chr14:75281045|75281312 hsa-miR-6081 1 0 0
chr14:75281045|75281312 hsa-miR-6125 1 0 0
chr14:75281045|75281312 hsa-miR-6863 0 1 0
chr14:75281045|75281312 hsa-miR-8082 1 0 0
chr14:75281045|75281312 hsa-miR-8089 1 1 0
chr14:75281045|75281312 hsa-miR-9500 1 0 0
chr14:75281045|75281312 hsa-miR-12115 1 1 0
chr14:75281045|75281312 hsa-miR-4731-5p 1 0 0
chr14:75281045|75281312 hsa-miR-504-3p 1 1 0
chr14:75281045|75281312 hsa-miR-6894-5p 1 0 0
chr14:75281045|75281312 hsa-miR-4687-3p 1 0 0
chr14:75281045|75281312 hsa-miR-224-5p 0 1 0
chr14:75281045|75281312 hsa-miR-139-3p 1 0 0
chr14:75281045|75281312 hsa-miR-4709-3p 1 0 0
chr14:75281045|75281312 hsa-miR-4722-5p 1 0 0
chr14:75281045|75281312 hsa-miR-3677-5p 1 0 0
chr14:75281045|75281312 hsa-miR-874-5p 0 1 0
chr14:75281045|75281312 hsa-miR-6741-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6806-5p 1 0 0
chr14:75281045|75281312 hsa-miR-3187-3p 0 1 0
chr14:75281045|75281312 hsa-miR-3189-5p 0 1 0
chr14:75281045|75281312 hsa-miR-101-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6871-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6805-5p 0 1 0
chr14:75281045|75281312 hsa-miR-6827-5p 1 1 0
chr14:75281045|75281312 hsa-miR-1224-5p 1 0 0
chr14:75281045|75281312 hsa-miR-486-3p 1 0 0
chr14:75281045|75281312 hsa-miR-6760-5p 1 1 0
chr14:75281045|75281312 hsa-miR-2467-3p 0 1 0
chr14:75281045|75281312 hsa-miR-6810-5p 1 1 0
chr14:75281045|75281312 hsa-miR-6749-5p 1 0 0
chr14:75281045|75281312 hsa-miR-3162-5p 1 0 0
chr14:75281045|75281312 hsa-miR-3944-5p 1 0 0
chr14:75281045|75281312 hsa-miR-34a-5p 1 0 0
chr14:75281045|75281312 hsa-miR-7113-5p 0 1 0
chr14:75281045|75281312 hsa-miR-6792-5p 0 1 0
chr14:75281045|75281312 hsa-miR-4649-3p 1 0 0
chr14:75281045|75281312 hsa-miR-5581-3p 0 1 0
chr14:75281045|75281312 hsa-miR-4763-3p 1 0 0
chr14:75281045|75281312 hsa-miR-6778-5p 0 1 0
chr14:75281045|75281312 hsa-miR-6754-5p 0 1 0
chr14:75281045|75281312 hsa-miR-6803-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6813-5p 0 1 0
chr14:75281045|75281312 hsa-miR-7107-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6780a-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6797-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6875-5p 0 1 0
chr14:75281045|75281312 hsa-miR-1915-3p 0 1 0
chr14:75281045|75281312 hsa-miR-3620-5p 1 0 0
chr14:75281045|75281312 hsa-miR-5196-5p 1 0 0
chr14:75281045|75281312 hsa-miR-328-5p 1 0 0
chr14:75281045|75281312 hsa-miR-4632-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6777-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6848-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6858-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6889-5p 1 0 0
chr14:75281045|75281312 hsa-miR-4758-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6731-5p 1 0 0
chr14:75281045|75281312 hsa-miR-3116 0 1 0
chr14:75281045|75281312 hsa-miR-3173-3p 1 0 0
chr14:75281045|75281312 hsa-miR-4646-5p 1 1 0
chr14:75281045|75281312 hsa-miR-6876-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6750-5p 1 0 0
chr14:75281045|75281312 hsa-miR-10398-5p 0 1 0
chr14:75281045|75281312 hsa-miR-9851-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6718-5p 1 0 0
chr14:75281045|75281312 hsa-miR-619-5p 1 0 0
chr14:75281045|75281312 hsa-miR-6764-5p 0 1 0
chr14:75281045|75281312 hsa-miR-34c-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:75281045|75281312
ORF Type ORF1
Protein Length 75
Nucleotide Length 225
Protein Sequence MMTSCSQHHPGPVALRQPAPCQTWTYLGPSMQQTGSLCTVAPWGWGPWPQSWSPCALRWSPVLPAALLTRLPSSS
Nucleotide Sequence TTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCCCGCTCCGTGCCAGACATGGACCTATCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGGAGCCCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCTGCACTGCTTACACGTCTTCCTTCGTCTTCA
CircID chr14:75281045|75281312
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MGASAQWLPGDGAHGHRAGAPVHSGGHLYSQLHCLHVFLRLH
Nucleotide Sequence CTGGGAGCCTCTGCACAGTGGCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGGAGCCCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCTGCACTGCTTACACGTCTTCCTTCGTCTTCAC
CircID chr14:75281045|75281312
ORF Type ORF3
Protein Length 82
Nucleotide Length 246
Protein Sequence MELKTEPFDDFLFPASSRPSGSETARSVPDMDLSGSFYAADWEPLHSGSLGMGPMATELEPLCTPVVTCTPSCTAYTSSFVF
Nucleotide Sequence ATGGAGCTGAAGACCGAGCCCTTTGATGACTTCCTGTTCCCAGCATCATCCAGGCCCAGTGGCTCTGAGACAGCCCGCTCCGTGCCAGACATGGACCTATCTGGGTCCTTCTATGCAGCAGACTGGGAGCCTCTGCACAGTGGCTCCCTGGGGATGGGGCCCATGGCCACAGAGCTGGAGCCCCTGTGCACTCCGGTGGTCACCTGTACTCCCAGCTGCACTGCTTACACGTCTTCCTTCGTCTTC
CircID chr14:75281045|75281312
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MGVQVTTGVHRGSSSVAMGPIPREPLCRGSQSAA
Nucleotide Sequence CTGGGAGTACAGGTGACCACCGGAGTGCACAGGGGCTCCAGCTCTGTGGCCATGGGCCCCATCCCCAGGGAGCCACTGTGCAGAGGCTCCCAGTCTGCTGCATAG
CircID chr14:75281045|75281312
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MSGTERAVSEPLGLDDAGNRKSSKGSVFSSMLLMLLT
Nucleotide Sequence ATGTCTGGCACGGAGCGGGCTGTCTCAGAGCCACTGGGCCTGGATGATGCTGGGAACAGGAAGTCATCAAAGGGCTCGGTCTTCAGCTCCATGCTGCTGATGCTCTTGACA
CircID chr14:75281045|75281312
ORF Type ORF6
Protein Length 59
Nucleotide Length 180
Protein Sequence MWPWAPSPGSHCAEAPSLLHRRTQIGPCLARSGLSQSHWAWMMLGTGSHQRARSSAPCC
Nucleotide Sequence CTGTGGCCATGGGCCCCATCCCCAGGGAGCCACTGTGCAGAGGCTCCCAGTCTGCTGCATAGAAGGACCCAGATAGGTCCATGTCTGGCACGGAGCGGGCTGTCTCAGAGCCACTGGGCCTGGATGATGCTGGGAACAGGAAGTCATCAAAGGGCTCGGTCTTCAGCTCCATGCTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab